BMRB Entry 10015
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR10015
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
NMR-STAR v2.1 text file (deprecated)
XML gzip file.
RDF gzip file.
All files associated with the entry
Title: Assignments of a HIV-1 integrase Zn finger domain mutant PubMed: 16672276
Deposition date: 2005-12-04 Original release date: 2007-02-07
Authors: Nomura, Yusuke; Masuda, Takao; Kawai, Gota
Citation: Nomura, Yusuke; Masuda, Takao; Kawai, Gota. "Structural Analysis of a Mutant of the HIV-1 Integrase Zinc Finger Domain That Forms a Single Conformation" J. Biochem. (Tokyo) 139, 753-759 (2006).
Assembly members:
Y15A, polymer, 55 residues, Formula weight is not available
ZN, non-polymer, 65.409 Da.
Natural source: Common Name: human immunodeficiency virus Taxonomy ID: 11676 Superkingdom: Viruses Kingdom: not available Genus/species: Lentivirus Human immunodeficiency virus 1
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
Y15A: FLDGIDKAQEEHEKAHSNWR
AMASDFNLPPVVAKEIVASC
DKCQLKGEAMHGQVD
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 130 |
| 15N chemical shifts | 48 |
| 1H chemical shifts | 182 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | integrase Zn finger domain mutant | 1 |
| 2 | ZINC (II) ION | 2 |
Entities:
Entity 1, integrase Zn finger domain mutant 55 residues - Formula weight is not available
| 1 | PHE | LEU | ASP | GLY | ILE | ASP | LYS | ALA | GLN | GLU | ||||
| 2 | GLU | HIS | GLU | LYS | ALA | HIS | SER | ASN | TRP | ARG | ||||
| 3 | ALA | MET | ALA | SER | ASP | PHE | ASN | LEU | PRO | PRO | ||||
| 4 | VAL | VAL | ALA | LYS | GLU | ILE | VAL | ALA | SER | CYS | ||||
| 5 | ASP | LYS | CYS | GLN | LEU | LYS | GLY | GLU | ALA | MET | ||||
| 6 | HIS | GLY | GLN | VAL | ASP |
Entity 2, ZINC (II) ION - Zn - 65.409 Da.
| 1 | ZN |
Samples:
y15a: Y15A, [U-13C; U-15N], 1.8 ± 0.1 mM
condition_1: pH: 6.5; temperature: 293 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 1H-15N HSQC | y15a | not available | condition_1 |
| 1H-13C HSQC | y15a | not available | condition_1 |
| HBHACONH | y15a | not available | condition_1 |
| HNCA | y15a | not available | condition_1 |
| HN(CO)CA | y15a | not available | condition_1 |
| CBCANH | y15a | not available | condition_1 |
| CBCA(CO)NH | y15a | not available | condition_1 |
| HNCO | y15a | not available | condition_1 |
| HNCACO | y15a | not available | condition_1 |
Software:
No software information available
NMR spectrometers:
- Bruker DRX 600 MHz
- Bruker DRX 500 MHz
Related Database Links:
| PDB | |
| DBJ | BAA00993 BAB85751 BAF34642 BAG31016 BAG31025 |
| EMBL | CAA06947 CAA77622 CAB58981 CBM41433 CDX10560 |
| GB | AAA44653 AAA44988 AAA83392 AAB04037 AAB47928 |
| SP | P04587 P12497 P20892 P35963 Q9QBZ1 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts