BMRB Entry 10084
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PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR10084
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Title: Nuclear move domain of nuclear distribution gene C homolog
Deposition date: 2007-01-24 Original release date: 2008-08-14
Authors: Nagashima, T.; Hayashi, F.; Yokoyama, S.
Citation: Nagashima, T.; Hayashi, F.; Yokoyama, S.. "Nuclear move domain of nuclear distribution gene C homolog" . ., .-..
Assembly members:
Nuclear move domain, polymer, 131 residues, Formula weight is not available
Natural source: Common Name: mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus
Experimental source: Production method: cell free synthesis
Entity Sequences (FASTA):
Nuclear move domain: GSSGSSGPNYRWTQTLAELD
LAVPFRVSFRLKGKDVVVDI
QRRHLRVGLKGQPPVVDGEL
YNEVKVEESSWLIEDGKVVT
VHLEKINKMEWWNRLVTSDP
EINTKKINPENSKLSDLDSE
TRSMVSGPSSG
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 589 |
| 15N chemical shifts | 145 |
| 1H chemical shifts | 946 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | nuclear distribution gene C homolog | 1 |
Entities:
Entity 1, nuclear distribution gene C homolog 131 residues - Formula weight is not available
| 1 | GLY | SER | SER | GLY | SER | SER | GLY | PRO | ASN | TYR | ||||
| 2 | ARG | TRP | THR | GLN | THR | LEU | ALA | GLU | LEU | ASP | ||||
| 3 | LEU | ALA | VAL | PRO | PHE | ARG | VAL | SER | PHE | ARG | ||||
| 4 | LEU | LYS | GLY | LYS | ASP | VAL | VAL | VAL | ASP | ILE | ||||
| 5 | GLN | ARG | ARG | HIS | LEU | ARG | VAL | GLY | LEU | LYS | ||||
| 6 | GLY | GLN | PRO | PRO | VAL | VAL | ASP | GLY | GLU | LEU | ||||
| 7 | TYR | ASN | GLU | VAL | LYS | VAL | GLU | GLU | SER | SER | ||||
| 8 | TRP | LEU | ILE | GLU | ASP | GLY | LYS | VAL | VAL | THR | ||||
| 9 | VAL | HIS | LEU | GLU | LYS | ILE | ASN | LYS | MET | GLU | ||||
| 10 | TRP | TRP | ASN | ARG | LEU | VAL | THR | SER | ASP | PRO | ||||
| 11 | GLU | ILE | ASN | THR | LYS | LYS | ILE | ASN | PRO | GLU | ||||
| 12 | ASN | SER | LYS | LEU | SER | ASP | LEU | ASP | SER | GLU | ||||
| 13 | THR | ARG | SER | MET | VAL | SER | GLY | PRO | SER | SER | ||||
| 14 | GLY |
Samples:
sample_1: Nuclear move domain, [U-13C; U-15N], 1.08 mM; d-NaOAc 20 mM; NaCl 100 mM; d-DTT 1 mM; NaN3 0.02%; H2O 90%; D2O 10%
condition_1: ionic strength: 120 mM; pH: 4.5; pressure: 1 atm; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 3D 13C-separated NOESY | sample_1 | not available | condition_1 |
| 3D 15N-separated NOESY | sample_1 | not available | condition_1 |
Software:
VNMR v6.1C, Varian - collection
NMRPipe v20020425, Delaglio, F. - processing
NMRView v5.0.4, Johnson, B.A. - data analysis
Kujira v0.8992, Kobayashi, N. - data analysis
CYANA v1.0.7, Guntert, P. - refinement, structure solution
NMR spectrometers:
- Varian INOVA 900 MHz
- Varian INOVA 800 MHz
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts