BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 11083

Title: Solution structure of the Leucine Rich Repeat of human Acidic leucine-rich nuclear phosphoprotein 32 family member B

Deposition date: 2009-12-16 Original release date: 2010-05-27

Authors: Tochio, N.; Koshiba, S.; Watanabe, S.; Harada, T.; Umehara, T.; Tanaka, A.; Kigawa, T.; Yokoyama, S.

Citation: Tochio, N.; Koshiba, S.; Watanabe, S.; Harada, T.; Umehara, T.; Tanaka, A.; Kigawa, T.; Yokoyama, S.. "Solution structure of the Leucine Rich Repeat of human Acidic leucine-rich nuclear phosphoprotein 32 family member B"  . ., .-..

Assembly members:
LRR_1 domain, polymer, 168 residues, Formula weight is not available

Natural source:   Common Name: human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: E. coli - cell free   Host organism: Escherichia coli

Entity Sequences (FASTA):
LRR_1 domain: GSSGSSGMDMKRRIHLELRN RTPAAVRELVLDNCKSNDGK IEGLTAEFVNLEFLSLINVG LISVSNLPKLPKLKKLELSE NRIFGGLDMLAEKLPNLTHL NLSGNKLKDISTLEPLKKLE CLKSLDLFNCEVTNLNDYRE SVFKLLPQLTYLDGYDREDQ EAPDSDAE

Data sets:
Data typeCount
13C chemical shifts739
15N chemical shifts173
1H chemical shifts1193

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1LRR_1 domain1

Entities:

Entity 1, LRR_1 domain 168 residues - Formula weight is not available

1   GLYSERSERGLYSERSERGLYMETASPMET
2   LYSARGARGILEHISLEUGLULEUARGASN
3   ARGTHRPROALAALAVALARGGLULEUVAL
4   LEUASPASNCYSLYSSERASNASPGLYLYS
5   ILEGLUGLYLEUTHRALAGLUPHEVALASN
6   LEUGLUPHELEUSERLEUILEASNVALGLY
7   LEUILESERVALSERASNLEUPROLYSLEU
8   PROLYSLEULYSLYSLEUGLULEUSERGLU
9   ASNARGILEPHEGLYGLYLEUASPMETLEU
10   ALAGLULYSLEUPROASNLEUTHRHISLEU
11   ASNLEUSERGLYASNLYSLEULYSASPILE
12   SERTHRLEUGLUPROLEULYSLYSLEUGLU
13   CYSLEULYSSERLEUASPLEUPHEASNCYS
14   GLUVALTHRASNLEUASNASPTYRARGGLU
15   SERVALPHELYSLEULEUPROGLNLEUTHR
16   TYRLEUASPGLYTYRASPARGGLUASPGLN
17   GLUALAPROASPSERASPALAGLU

Samples:

sample_1: LRR_1 domain, [U-13C; U-15N], 1.3 mM; TRIS, [U-2H], 20 mM; sodium chloride 100 mM; DTT, [U-2H], 1 mM; sodium azide 0.02%; H2O 90%; D2O 10%

condition_1: ionic strength: 120 mM; pH: 7.0; pressure: 1 atm; temperature: 296 K

Experiments:

NameSampleSample stateSample conditions
3D 15N-separated NOESYsample_1isotropiccondition_1
3D 13C-separated NOESYsample_1isotropiccondition_1

Software:

xwinnmr v3.5, Bruker - collection

NMRPipe v20030801, Delaglio, F. - processing

NMRView v5.0.4, Johnson, B.A. - data analysis

Kujira v0.9820, Kobayashi, N. - data analysis

CYANA v2.0.17, Guntert, P. - refinement

NMR spectrometers:

  • Bruker AVANCE 900 MHz

Related Database Links:

PDB
DBJ BAD97174 BAG36474
EMBL CAA68855 CAA68856 CAA69265 CAH04953
GB AAB37579 AAH13003 AAH19658 AAI02955 EAW58864
REF NP_001030246 NP_001253837 NP_006392 XP_001156957 XP_002743164
SP Q3SZC6 Q6A1I3 Q92688
TPG DAA26785

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts