BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 19078

Title: Human fibrillin1 EGF2-EGF3-hybrid1-cbEGF1   PubMed: 23649688

Deposition date: 2013-03-06 Original release date: 2014-04-16

Authors: Robertson, Ian; Osuch, Isabelle; Jensen, Sacha; Yadin, David; Handford, Penny; Redfield, Christina

Citation: Robertson, Ian; Osuch, Isabelle; Yadin, David; Handford, Penny; Jensen, Sacha; Redfield, Christina. "(1)H, (13)C and (15)N resonance assignments for the fibrillin-1 EGF2-EGF3-hybrid1-cbEGF1 four-domain fragment."  Biomol. NMR Assignments 8, 189-194 (2014).

Assembly members:
e2cb1, polymer, 177 residues, 18823.4 Da.

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
e2cb1: SASRSIQHCNIRCMNGGSCS DDHCLCQKGYIGTHCGQPVC ESGCLNGGRCVAPNRCACTY GFTGPQCERDYRTGPCFTVI SNQMCQGQLSGIVSTKTLCC ATVGRAWGHPCEMCPAQPHP CRRGFIPNIRTGACQDVDEC QAIPGLCQGGNCINTVGSFE CKCPAGHKLNEVSQKCE

Data sets:
Data typeCount
13C chemical shifts624
15N chemical shifts170
1H chemical shifts965

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1fibrillin1

Entities:

Entity 1, fibrillin 177 residues - 18823.4 Da.

1   SERALASERARGSERILEGLNHISCYSASN
2   ILEARGCYSMETASNGLYGLYSERCYSSER
3   ASPASPHISCYSLEUCYSGLNLYSGLYTYR
4   ILEGLYTHRHISCYSGLYGLNPROVALCYS
5   GLUSERGLYCYSLEUASNGLYGLYARGCYS
6   VALALAPROASNARGCYSALACYSTHRTYR
7   GLYPHETHRGLYPROGLNCYSGLUARGASP
8   TYRARGTHRGLYPROCYSPHETHRVALILE
9   SERASNGLNMETCYSGLNGLYGLNLEUSER
10   GLYILEVALSERTHRLYSTHRLEUCYSCYS
11   ALATHRVALGLYARGALATRPGLYHISPRO
12   CYSGLUMETCYSPROALAGLNPROHISPRO
13   CYSARGARGGLYPHEILEPROASNILEARG
14   THRGLYALACYSGLNASPVALASPGLUCYS
15   GLNALAILEPROGLYLEUCYSGLNGLYGLY
16   ASNCYSILEASNTHRVALGLYSERPHEGLU
17   CYSLYSCYSPROALAGLYHISLYSLEUASN
18   GLUVALSERGLNLYSCYSGLU

Samples:

sample_1: fibrillin e2cb1, [U-13C; U-15N], 1 mM; calcium chloride 5 mM

sample_2: fibrillin e2cb1, [U-13C; U-15N], 1 mM; calcium chloride 5 mM

sample_conditions_1: ionic strength: 15 mM; pH: 5.4; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-15N HSQCsample_1isotropicsample_conditions_1
2D 1H-15N HSQCsample_1isotropicsample_conditions_1
3D HBHA(CO)NHsample_1isotropicsample_conditions_1
3D HNCOsample_1isotropicsample_conditions_1
3D HNCAsample_1isotropicsample_conditions_1
3D HNCACBsample_1isotropicsample_conditions_1
3D HN(CO)CAsample_1isotropicsample_conditions_1
3D CBCA(CO)NHsample_1isotropicsample_conditions_1
3D HCCH-TOCSYsample_2isotropicsample_conditions_1
3D 1H-13C NOESYsample_2isotropicsample_conditions_1
3D 1H-13C NOESYsample_1isotropicsample_conditions_1
2D 1H-1H NOESYsample_2isotropicsample_conditions_1

Software:

No software information available

NMR spectrometers:

  • Bruker Avance 500 MHz
  • home built OMEGA 950 MHz
  • home built OMEGA 750 MHz

Related Database Links:

UNP P35555

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts