BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 25024

Title: 3D structure of RP domain of MiSp

Deposition date: 2014-06-16 Original release date: 2015-06-15

Authors: Yang, Daiwen; Gao, Zhenwei

Citation: Gao, Daiwen; Yang, Daiwen. "3D structure of RP domain of MiSp"  Not known ., .-..

Assembly members:
entity, polymer, 125 residues, 12115.084 Da.

Natural source:   Common Name: E. coli   Taxonomy ID: 562   Superkingdom: Bacteria   Kingdom: not available   Genus/species: Escherichia coli

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
entity: GNAFAQSLSSNLLSSGDFVQ MISSTTSTDQAVSVATSVAQ NVGNQLGLDANAMNSLLGAV SGYVSTLGNAISDASAYANA ISSAIGNVLANSGSISESTA SSAASSAASSVTTTLTSYGP AVFYA

Data sets:
Data typeCount
13C chemical shifts136
15N chemical shifts112
1H chemical shifts263

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1RP domain of MiSp1

Entities:

Entity 1, RP domain of MiSp 125 residues - 12115.084 Da.

1   GLYASNALAPHEALAGLNSERLEUSERSER
2   ASNLEULEUSERSERGLYASPPHEVALGLN
3   METILESERSERTHRTHRSERTHRASPGLN
4   ALAVALSERVALALATHRSERVALALAGLN
5   ASNVALGLYASNGLNLEUGLYLEUASPALA
6   ASNALAMETASNSERLEULEUGLYALAVAL
7   SERGLYTYRVALSERTHRLEUGLYASNALA
8   ILESERASPALASERALATYRALAASNALA
9   ILESERSERALAILEGLYASNVALLEUALA
10   ASNSERGLYSERILESERGLUSERTHRALA
11   SERSERALAALASERSERALAALASERSER
12   VALTHRTHRTHRLEUTHRSERTYRGLYPRO
13   ALAVALPHETYRALA

Samples:

sample_1: entity, [U-100% 13C; U-100% 15N], 0.6 mM; H2O 95%; D2O 5%

sample_conditions_1: ionic strength: 0.3 M; pH: 7; pressure: 1 atm; temperature: 302 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-15N HSQCsample_1isotropicsample_conditions_1

Software:

CYANA, Guntert, Mumenthaler and Wuthrich - structure solution

NMR spectrometers:

  • Bruker Avance 800 MHz

Related Database Links:

PDB
GB ABC72645

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts