BMRB Entry 4220
Chem Shift validation: AVS_full
BMRB Entry DOI: doi:10.13018/BMR4220
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Title: HIV-1 capsid protein major homology region peptide analog
Deposition date: 1998-07-28 Original release date: 2000-04-07
Authors: Clish, C.; Peyton, D.; Barklis, E.
Citation: Clish, C.; Peyton, D.; Barklis, E.. "Solution structures of human immunodeficiency virus type 1 (HIV-1) and moloney murine leukemia virus (MoMLV) capsid protein major-homology-region peptide analogs by NMR spectroscopy" Eur. J. Biochem. 257, 69-77 (1998).
Assembly members:
HIV-1 capsid, polymer, 31 residues, Formula weight is not available
Natural source: Common Name: human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: not available Genus/species: Homo sapiens
Experimental source: Production method: chemical synthesis
Entity Sequences (FASTA):
HIV-1 capsid: CSILDIRQGPKEPFRDYVDR
FYKTLRAEQAS
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 178 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | HIV-1 capsid | 1 |
Entities:
Entity 1, HIV-1 capsid 31 residues - Formula weight is not available
| 1 | CYS | SER | ILE | LEU | ASP | ILE | ARG | GLN | GLY | PRO | ||||
| 2 | LYS | GLU | PRO | PHE | ARG | ASP | TYR | VAL | ASP | ARG | ||||
| 3 | PHE | TYR | LYS | THR | LEU | ARG | ALA | GLU | GLN | ALA | ||||
| 4 | SER |
Samples:
sample_1: HIV-1 capsid5 – 7 mM; H2O 90%; D2O 10%
sample_cond_1: pH: 3.1; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| NOESY | not available | not available | not available |
| COSY | not available | not available | not available |
| TOCSY | not available | not available | not available |
Software:
No software information available
NMR spectrometers:
- Bruker AMX 400 MHz
Related Database Links:
| BMRB | 15137 16555 17307 17738 19261 19264 19575 25532 |
| PDB | |
| DBJ | BAA00992 BAA12988 BAA12996 BAA93773 BAA93774 |
| EMBL | CAA11880 CAA11882 CAA11884 CAA11885 CAA11886 |
| GB | AAA44201 AAA44224 AAA44306 AAA44313 AAA44324 |
| PIR | FOVWLV |
| PRF | 1102247B 1103299C |
| REF | NP_057849 NP_057850 NP_579880 |
| SP | P03347 P03348 P03349 P03366 P03367 |