BMRB Entry 4938
Click here to enlarge.
PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR4938
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
NMR-STAR v2.1 text file (deprecated)
XML gzip file.
RDF gzip file.
All files associated with the entry
Title: Two Different Neurodegenerative Diseases Caused by Proteins with Similiar Structures PubMed: 11226243
Deposition date: 2001-01-11 Original release date: 2001-08-22
Authors: Mo, Huaping; Moore, Richard; Cohen, Fred; Westway, David; Prusiner, Stanley; Wright, Peter; Dyson, H.
Citation: Mo, Huaping; Moore, Richard; Cohen, Fred; Westaway, David; Prusiner, Stanley; Wright, Peter; Dyson, H.. "Two Different Neurodegenerative Diseases Caused by Proteins with Similiar Structures" Proc. Natl. Acad. Sci. U. S. A. 98, 2352-2357 (2001).
Assembly members:
mouse doppel, polymer, 132 residues, 15096 Da.
Natural source: Common Name: mouse Taxonomy ID: 10090 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Mus musculus
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
mouse doppel: ARGIKHRFKWNRKVLPSSGG
QITEARVAENRPGAFIKQGR
KLDIDFGAEGNRYYAANYWQ
FPDGIYYEGCSEANVTKEML
VTSCVNATQAANQAEFSREK
QDSKLHQRVLWRLIKEICSA
KHCDFWLERGAA
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 941 |
| 13C chemical shifts | 590 |
| 15N chemical shifts | 154 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | mdpl | 1 |
Entities:
Entity 1, mdpl 132 residues - 15096 Da.
| 1 | ALA | ARG | GLY | ILE | LYS | HIS | ARG | PHE | LYS | TRP | ||||
| 2 | ASN | ARG | LYS | VAL | LEU | PRO | SER | SER | GLY | GLY | ||||
| 3 | GLN | ILE | THR | GLU | ALA | ARG | VAL | ALA | GLU | ASN | ||||
| 4 | ARG | PRO | GLY | ALA | PHE | ILE | LYS | GLN | GLY | ARG | ||||
| 5 | LYS | LEU | ASP | ILE | ASP | PHE | GLY | ALA | GLU | GLY | ||||
| 6 | ASN | ARG | TYR | TYR | ALA | ALA | ASN | TYR | TRP | GLN | ||||
| 7 | PHE | PRO | ASP | GLY | ILE | TYR | TYR | GLU | GLY | CYS | ||||
| 8 | SER | GLU | ALA | ASN | VAL | THR | LYS | GLU | MET | LEU | ||||
| 9 | VAL | THR | SER | CYS | VAL | ASN | ALA | THR | GLN | ALA | ||||
| 10 | ALA | ASN | GLN | ALA | GLU | PHE | SER | ARG | GLU | LYS | ||||
| 11 | GLN | ASP | SER | LYS | LEU | HIS | GLN | ARG | VAL | LEU | ||||
| 12 | TRP | ARG | LEU | ILE | LYS | GLU | ILE | CYS | SER | ALA | ||||
| 13 | LYS | HIS | CYS | ASP | PHE | TRP | LEU | GLU | ARG | GLY | ||||
| 14 | ALA | ALA |
Samples:
sample_1: mouse doppel, [U-15N], 3 mM
sample_2: mouse doppel, [U-15N; U-13N], 2 mM
ex-cond1: pH: 5.2; temperature: 299 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|
Software:
No software information available
NMR spectrometers:
- Bruker Avance 600 MHz
Related Database Links:
| PDB | |
| DBJ | BAC31436 BAE36166 |
| GB | AAD52000 AAF02544 AAF02545 AAF09196 AAF09197 |
| REF | NP_001119810 NP_001265186 NP_001265187 NP_001265188 NP_001265449 |
| SP | Q9QUG3 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts