BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 6208

Title: Backbone 1H, 13C, and 15N Chemical Shift Assignments for Diacylglycerol kinase alpha

Deposition date: 2004-05-19 Original release date: 2006-01-11

Authors: Liu, Gaohua; Shao, Ying; Xiao, Rong; Acton, Thomas; Montelione, Gaetano; Szyperski, Thomas

Citation: Liu, Gaohua; Shao, Ying; Xiao, Rong; Acton, Thomas; Montelione, Gaetano; Szyperski, Thomas. "1H, 13C and 15N Assigned Chemical Shifts for Diacylglycerol kinase alpha"  J. Biomol. NMR ., .-..

Assembly members:
Ca.CD2, polymer, 118 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
Ca.CD2: MAKERGLISPSDFAQLQKYM EYSTKKVSDVLKLFEDGEMA KYVQGDAIGYEGFQQFLKIY LEVDNVPRHLSLALFQSFET GHCLNETNVTKDVVCLNDVS CYFSLLEGGRPEDKLEWS

Data sets:
Data typeCount
1H chemical shifts849
13C chemical shifts401
15N chemical shifts126
coupling constants36

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Diacylglycerol kinase alpha1

Entities:

Entity 1, Diacylglycerol kinase alpha 118 residues - Formula weight is not available

1   METALALYSGLUARGGLYLEUILESERPRO
2   SERASPPHEALAGLNLEUGLNLYSTYRMET
3   GLUTYRSERTHRLYSLYSVALSERASPVAL
4   LEULYSLEUPHEGLUASPGLYGLUMETALA
5   LYSTYRVALGLNGLYASPALAILEGLYTYR
6   GLUGLYPHEGLNGLNPHELEULYSILETYR
7   LEUGLUVALASPASNVALPROARGHISLEU
8   SERLEUALALEUPHEGLNSERPHEGLUTHR
9   GLYHISCYSLEUASNGLUTHRASNVALTHR
10   LYSASPVALVALCYSLEUASNASPVALSER
11   CYSTYRPHESERLEULEUGLUGLYGLYARG
12   PROGLUASPLYSLEUGLUTRPSER

Samples:

sample_1: Ca.CD2, [U-13C; U-15N], 1.1 mM; DTT 10 mM; CaCl2 5 mM; NaCl 100 mM; MES 20 mM; D2O 5%; NaN3 0.02%

Conditions_1: pH: 6.5; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
15N 2D HSQCsample_1not availableConditions_1
13C 2D HSQCsample_1not availableConditions_1
3D HNCOsample_1not availableConditions_1
3D HNCACBsample_1not availableConditions_1
3D HNCAsample_1not availableConditions_1
3D HNcoCAsample_1not availableConditions_1
3D RD HabCabcoNHNsample_1not availableConditions_1
3D RD HCCHCOSYsample_1not availableConditions_1
3D HCcHTOCSYsample_1not availableConditions_1

Software:

No software information available

NMR spectrometers:

  • BRUKER AVANCE 600 MHz
  • BRUKER AVANCE 800 MHz

Related Database Links:

PDB
DBJ BAG64388 BAI45990
EMBL CAA44396 CAH90948
GB AAC34804 AAC34806 AAH23523 AAH31870 AAQ02567
PRF 1702222A
REF NP_001125544 NP_001336 NP_958852 NP_958853 NP_963848
SP P23743

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts