BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 6598

Title: Mouse Doppel 1-30 peptide   PubMed: 16388591

Deposition date: 2005-04-14 Original release date: 2006-02-23

Authors: Papadopoulos, Evangelos

Citation: Papadopoulos, Evangelos; Oglecka, Kamila; Maler, Lena; Jarvet, J?ri; Wright, Peter; Dyson, H.; Graslund, Astrid. "NMR Solution Structure of the Peptide Fragment 1-30, Derived from Unprocessed Mouse Doppel Protein, in DHPC Micelles"  Biochemistry 45, 159-166 (2006).

Assembly members:
mouse Doppel, polymer, 30 residues, Formula weight is not available

Natural source:   Common Name: mouse   Taxonomy ID: 10090   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Mus Musculus

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
mouse Doppel: MKNRLGTWWVAILCMLLASH LSTVKARGIK

Data sets:
Data typeCount
1H chemical shifts75

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1Prion-like protein doppel1

Entities:

Entity 1, Prion-like protein doppel 30 residues - Formula weight is not available

1   METLYSASNARGLEUGLYTHRTRPTRPVAL
2   ALAILELEUCYSMETLEULEUALASERHIS
3   LEUSERTHRVALLYSALAARGGLYILELYS

Samples:

sample_1: mouse Doppel 2 mM; DHPC 100 mM; D2O 10%

sample_cond_1: pH: 3.5; temperature: 318 K; pressure: 1 atm

Experiments:

NameSampleSample stateSample conditions
2D NOESYnot availablenot availablenot available
2D TOCSYnot availablenot availablenot available

Software:

FELIX v2000.1 - data analysis

DYANA v1.5 - structure solution, refinement

NMR spectrometers:

  • Varian INOVA 800 MHz

Related Database Links:

PDB
DBJ BAC31436 BAE36166
GB AAD52000 AAF02544 AAF02545 AAF09196 AAF09197
REF NP_001119810 NP_001265186 NP_001265187 NP_001265188 NP_001265449
SP Q9QUG3