BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 6910

Title: 1H,13C,15N chemical shift assignment for SMP-1 (Small Myrisoylated Protein-1) from Leishmania   PubMed: 16601858

Deposition date: 2005-11-29 Original release date: 2006-04-14

Authors: Gooley, Paul; Mertens, Haydyn; Tull, Dedreia; McConville, Malcolm

Citation: Gooley, Paul; Mertens, Haydyn; Tull, Dedreia; McConville, Malcolm. "1H, 13C and 15N Resonance Assignments of SMP-1: A Small Myristoylated Protein from Leishmania major"  J. Biomol. NMR 36, 26-26 (2006).

Assembly members:
SMP-1, polymer, 131 residues, 14988.8 Da.

Natural source:   Common Name: Leishmania major   Taxonomy ID: 5664   Superkingdom: Eukaryota   Kingdom: Protista   Genus/species: Leishmania major

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
SMP-1: MGCGASSENSSVTYVNGRPT FVGEEVTKGFEKDNGLLFRI VNKKKKQWAYYNDTTQYEMH VLVTFNEDCDIKALGKTKLE QQENGEWVASVVVYPCETEM FIEGRVNGFKSKMDALPLSE EYRQHQAEKDK

Data sets:
Data typeCount
13C chemical shifts423
15N chemical shifts139
1H chemical shifts824

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1SMP-11

Entities:

Entity 1, SMP-1 131 residues - 14988.8 Da.

1   METGLYCYSGLYALASERSERGLUASNSER
2   SERVALTHRTYRVALASNGLYARGPROTHR
3   PHEVALGLYGLUGLUVALTHRLYSGLYPHE
4   GLULYSASPASNGLYLEULEUPHEARGILE
5   VALASNLYSLYSLYSLYSGLNTRPALATYR
6   TYRASNASPTHRTHRGLNTYRGLUMETHIS
7   VALLEUVALTHRPHEASNGLUASPCYSASP
8   ILELYSALALEUGLYLYSTHRLYSLEUGLU
9   GLNGLNGLUASNGLYGLUTRPVALALASER
10   VALVALVALTYRPROCYSGLUTHRGLUMET
11   PHEILEGLUGLYARGVALASNGLYPHELYS
12   SERLYSMETASPALALEUPROLEUSERGLU
13   GLUTYRARGGLNHISGLNALAGLULYSASP
14   LYS

Samples:

sample_1: SMP-1, [U-13C; U-15N], 1 mM; Dithiothreitol 5 mM; Sodium Phosphate 50 mM; H2O 90%; D2O 10%

conditions_1: ionic strength: 50 mM; pH: 6.8; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
CBCA(CO)NHsample_1not availableconditions_1
HNCACBsample_1not availableconditions_1
H(CCO)NHsample_1not availableconditions_1
C(CO)NHsample_1not availableconditions_1
HBHA(CO)NHsample_1not availableconditions_1
HCCH-TOCSYsample_1not availableconditions_1
HNHAsample_1not availableconditions_1
HNHBsample_1not availableconditions_1
(HB)CB(CGCD)HDsample_1not availableconditions_1
1H-TOCSY-relayed ct-(13C,1H)HMQCsample_1not availableconditions_1
15N-HSQCsample_1not availableconditions_1
13C-HSQCsample_1not availableconditions_1

Software:

NMRPipe v2.3, Frank Delaglio -

NMRView v5.2.2, Bruce Johnson -

NMR spectrometers:

  • Varian Inova 500 MHz
  • Varian Inova 600 MHz

Related Database Links:

PDB
EMBL CAJ04271 CAM67513 CBZ33770
GB AAV59017
REF XP_001465265 XP_001682883 XP_003860476

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts