BMRB Entry 7279
Chem Shift validation: AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7279
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Title: NMR resonance assignments of the human non-chromitin architectural transcription factor HMGA1 PubMed: 17206468
Deposition date: 2006-08-29 Original release date: 2006-09-05
Authors: Buchko, Garry; Ni, Shuisong; Reeves, Raymond; Kennedy, Michael
Citation: Buchko, Garry; Ni, Shuisong; Lourette, Natacha; Reeves, Raymond; Kennedy, Michael. "NMR resonance assignments of the human high mobility group protein HMGA1." J. Biomol. NMR 38, 185-185 (2007).
Assembly members:
HMGA1, polymer, 107 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
HMGA1: MSESSSKSSQPLASKQEKDG
TEKRGRGRPRKQPPVSPGTA
LVGSQKEPSEVPTPKRPRGR
PKGSKNKGAAKTRKTTTTPG
RKPRGRPKKLEKEEEEGISQ
ESSEEEQ
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 344 |
| 15N chemical shifts | 89 |
| 1H chemical shifts | 251 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | HMGA1 | 1 |
Entities:
Entity 1, HMGA1 107 residues - Formula weight is not available
| 1 | MET | SER | GLU | SER | SER | SER | LYS | SER | SER | GLN | ||||
| 2 | PRO | LEU | ALA | SER | LYS | GLN | GLU | LYS | ASP | GLY | ||||
| 3 | THR | GLU | LYS | ARG | GLY | ARG | GLY | ARG | PRO | ARG | ||||
| 4 | LYS | GLN | PRO | PRO | VAL | SER | PRO | GLY | THR | ALA | ||||
| 5 | LEU | VAL | GLY | SER | GLN | LYS | GLU | PRO | SER | GLU | ||||
| 6 | VAL | PRO | THR | PRO | LYS | ARG | PRO | ARG | GLY | ARG | ||||
| 7 | PRO | LYS | GLY | SER | LYS | ASN | LYS | GLY | ALA | ALA | ||||
| 8 | LYS | THR | ARG | LYS | THR | THR | THR | THR | PRO | GLY | ||||
| 9 | ARG | LYS | PRO | ARG | GLY | ARG | PRO | LYS | LYS | LEU | ||||
| 10 | GLU | LYS | GLU | GLU | GLU | GLU | GLY | ILE | SER | GLN | ||||
| 11 | GLU | SER | SER | GLU | GLU | GLU | GLN |
Samples:
sample_1: HMGA1, [U-15N; U-13C], 2 ± 0.2 mM; potassium phosphate 20 mM; EDTA 1 mM
conditions_1: pH: 6.0; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 2D HSQC | not available | not available | not available |
| 3D HNCA | not available | not available | not available |
| 3D HNCOCA | not available | not available | not available |
| 3D HNCOCA | not available | not available | not available |
| 3D CBCA(CO)NH | not available | not available | not available |
| 3D HNCACB | not available | not available | not available |
| 3D HNCO | not available | not available | not available |
| 3D HNN | not available | not available | not available |
| 3D CCC-TOCSY | not available | not available | not available |
| 3D 15N-edited NOESY | not available | not available | not available |
Software:
No software information available
NMR spectrometers:
- Varian Inova 900 MHz
- Varian Inova 750 MHz
- Varian Inova 600 MHz
- Varian UnityPlus 500 MHz
Related Database Links:
| DBJ | BAE32952 BAE42398 BAE91504 BAG62962 BAJ20344 |
| EMBL | CAA33080 |
| GB | AAA35998 AAA88072 AAB00145 AAD53889 AAF06666 |
| REF | NP_001003387 NP_001020598 NP_001034445 NP_001159948 NP_001160007 |
| SP | P17095 P17096 Q6URC2 Q9QXP3 |
Download simulated HSQC data in one of the following formats:
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