BMRB Entry 11442
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR11442
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Title: Backbone 1H, 13C and 15N chemical shift assignments of Hd3a (K31A/E57A) PubMed: 21804566
Deposition date: 2011-05-20 Original release date: 2011-08-17
Authors: Taoka, Ken-ichiro; Ohki, Izuru; Tsuji, Hiroyuki; Furuita, Kyoko; Hayashi, Kokoro; Yanase, Tomoko; Yamaguchi, Midori; Nakashima, Chika; Purwestri, Yekti; Tamaki, Shojiro; Ogaki, Yuka; Shimada, Chihiro; Nakagawa, Atsushi; Kojima, Chojiro; Shimamoto, Ko
Citation: Taoka, Ken-ichiro; Ohki, Izuru; Tsuji, Hiroyuki; Furuita, Kyoko; Hayashi, Kokoro; Yanase, Tomoko; Yamaguchi, Midori; Nakashima, Chika; Purwestri, Yekti; Tamaki, Shojiro; Ogaki, Yuka; Shimada, Chihiro; Nakagawa, Atsushi; Kojima, Chojiro; Shimamoto, Ko. "14-3-3 proteins act as intracellular receptors for rice Hd3a florigen" Nature 476, 332-335 (2011).
Assembly members:
Hd3a_(K31A/E57A), polymer, 183 residues, Formula weight is not available
Natural source: Common Name: rice Taxonomy ID: 4530 Superkingdom: Eukaryota Kingdom: Viridiplantae Genus/species: Oryza sativa
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
Hd3a_(K31A/E57A): GPGHMAGSGRDRDPLVVGRV
VGDVLDAFVRSTNLAVTYGS
KTVSNGCELKPSMVTHQPRV
AVGGNDMRTFYTLVMVDPDA
PSPSDPNLREYLHWLVTDIP
GTTAASFGQEVMCYESPRPT
MGIHRLVFVLFQQLGRQTVY
APGWRQNFNTKDFAELYNLG
SPVAAVYFNCQREAGSGGRR
VYP
- assigned_chemical_shifts
Data type | Count |
13C chemical shifts | 441 |
15N chemical shifts | 140 |
1H chemical shifts | 140 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | Hd3a (K31A/E57A) | 1 |
Entities:
Entity 1, Hd3a (K31A/E57A) 183 residues - Formula weight is not available
1 | GLY | PRO | GLY | HIS | MET | ALA | GLY | SER | GLY | ARG | ||||
2 | ASP | ARG | ASP | PRO | LEU | VAL | VAL | GLY | ARG | VAL | ||||
3 | VAL | GLY | ASP | VAL | LEU | ASP | ALA | PHE | VAL | ARG | ||||
4 | SER | THR | ASN | LEU | ALA | VAL | THR | TYR | GLY | SER | ||||
5 | LYS | THR | VAL | SER | ASN | GLY | CYS | GLU | LEU | LYS | ||||
6 | PRO | SER | MET | VAL | THR | HIS | GLN | PRO | ARG | VAL | ||||
7 | ALA | VAL | GLY | GLY | ASN | ASP | MET | ARG | THR | PHE | ||||
8 | TYR | THR | LEU | VAL | MET | VAL | ASP | PRO | ASP | ALA | ||||
9 | PRO | SER | PRO | SER | ASP | PRO | ASN | LEU | ARG | GLU | ||||
10 | TYR | LEU | HIS | TRP | LEU | VAL | THR | ASP | ILE | PRO | ||||
11 | GLY | THR | THR | ALA | ALA | SER | PHE | GLY | GLN | GLU | ||||
12 | VAL | MET | CYS | TYR | GLU | SER | PRO | ARG | PRO | THR | ||||
13 | MET | GLY | ILE | HIS | ARG | LEU | VAL | PHE | VAL | LEU | ||||
14 | PHE | GLN | GLN | LEU | GLY | ARG | GLN | THR | VAL | TYR | ||||
15 | ALA | PRO | GLY | TRP | ARG | GLN | ASN | PHE | ASN | THR | ||||
16 | LYS | ASP | PHE | ALA | GLU | LEU | TYR | ASN | LEU | GLY | ||||
17 | SER | PRO | VAL | ALA | ALA | VAL | TYR | PHE | ASN | CYS | ||||
18 | GLN | ARG | GLU | ALA | GLY | SER | GLY | GLY | ARG | ARG | ||||
19 | VAL | TYR | PRO |
Samples:
sample_1: Hd3a (K31A/E57A), [U-13C; U-15N], 0.2 mM; potassium phosphate 50 mM; potassium chloride 100 mM; DTT 1 mM; H2O 93%; D2O 7%
sample_conditions_1: pH: 6.8; temperature: 313 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
3D HNCO | sample_1 | isotropic | sample_conditions_1 |
3D HNCA | sample_1 | isotropic | sample_conditions_1 |
3D HN(CO)CA | sample_1 | isotropic | sample_conditions_1 |
3D HN(CA)CB | sample_1 | isotropic | sample_conditions_1 |
3D HN(COCA)CB | sample_1 | isotropic | sample_conditions_1 |
Software:
NMRPipe, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing
RNMRTK, Jeff Hoch and Alan Stern - processing
SPARKY, Goddard - chemical shift assignment
NMR spectrometers:
- Bruker Avance 500 MHz
Related Database Links:
DBJ | BAB61027 BAB61028 BAB61029 BAB61030 BAC21280 |
GB | ABB17666 ABB17667 AFK31055 AFK31056 AFK31057 |
REF | NP_001056860 |
SP | Q93WI9 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts