BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 17924

Title: SEVI   PubMed: 22907203

Deposition date: 2011-09-07 Original release date: 2012-08-23

Authors: Snell, Jessica; Sheftic, Sarah; Alexandrescu, Andrei

Citation: Sheftic, Sarah; Snell, Jessica; Jha, Suman; Alexandrescu, Andrei. "Inhibition of semen-derived enhancer of virus infection (SEVI) fibrillogenesis by zinc and copper."  Eur. Biophys. J. 41, 695-704 (2012).

Assembly members:
SEVI, polymer, 39 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: chemical synthesis

Entity Sequences (FASTA):
SEVI: GIHKQKEKSRLQGGVLVNEI LNHMKRATQIPSYKKLIMY

Data sets:
Data typeCount
13C chemical shifts38
1H chemical shifts206

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1SEVI1

Entities:

Entity 1, SEVI 39 residues - Formula weight is not available

1   GLYILEHISLYSGLNLYSGLULYSSERARG
2   LEUGLNGLYGLYVALLEUVALASNGLUILE
3   LEUASNHISMETLYSARGALATHRGLNILE
4   PROSERTYRLYSLYSLEUILEMETTYR

Samples:

sample_1: SEVI 3.0 mM

sample_conditions_1: ionic strength: 0 M; pH: 5.6; pressure: 1 atm; temperature: 273 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-1H NOESYsample_1isotropicsample_conditions_1
2D 1H-1H TOCSYsample_1isotropicsample_conditions_1
2D 1H-13C HSQCsample_1isotropicsample_conditions_1
2D 1H-15N HSQCsample_1isotropicsample_conditions_1

Software:

FELIX, Accelrys Software Inc. - data analysis, peak picking, processing

VNMRJ, Varian - data analysis

NMR spectrometers:

  • Varian INOVA 600 MHz

Related Database Links:

BMRB 17193 17346 17347 17925 18287
PDB
DBJ BAD89417 BAG62248
EMBL CAA36422 CAA37673
GB AAA60021 AAA60022 AAA69694 AAB60640 AAH07460
REF NP_001090 NP_001127666 NP_001278966 XP_001115549 XP_001148736
SP P15309