BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 18580

Title: 1H, 13C, and 15N backbone and side chain resonance assignments of the C-terminal DNA binding and dimerization domain of v-Myc   PubMed: 23179058

Deposition date: 2012-07-09 Original release date: 2013-02-08

Authors: Kizilsavas, Gonul; Saxena, Saurabh; Zerko, Szymon; Kozminski, Wiktor; Bister, Klaus; Konrat, Robert

Citation: Kzlsava, Gonul; Saxena, Saurabh; erko, Szymon; Komiski, Wiktor; Bister, Klaus; Konrat, Robert. "1H, 13C, and 15N backbone and side chain resonance assignments of the C-terminal DNA binding and dimerization domain of v-Myc."  Biomol. NMR Assignments 7, 321-324 (2013).

Assembly members:
c-Terminal_v-Myc, polymer, 131 residues, Formula weight is not available

Natural source:   Common Name: not available   Taxonomy ID: not available   Superkingdom: not available   Kingdom: not available   Genus/species: Myelocytomatosis virus

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
c-Terminal_v-Myc: MKHHHHHHPMSDYDIPTTEN LYFQGAMVSNNRKCSSPRTL DSEENDKRRTHNVLERQRRN ELKLRFFALRDQIPEVANNE KAPKVVILKKATEYVLSLQS DEHKLIAEKEQLRRRREQLK HNLEQLRNSRA

Data sets:
Data typeCount
13C chemical shifts418
15N chemical shifts120
1H chemical shifts629

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1c-Terminal v-Myc1

Entities:

Entity 1, c-Terminal v-Myc 131 residues - Formula weight is not available

1   METLYSHISHISHISHISHISHISPROMET
2   SERASPTYRASPILEPROTHRTHRGLUASN
3   LEUTYRPHEGLNGLYALAMETVALSERASN
4   ASNARGLYSCYSSERSERPROARGTHRLEU
5   ASPSERGLUGLUASNASPLYSARGARGTHR
6   HISASNVALLEUGLUARGGLNARGARGASN
7   GLULEULYSLEUARGPHEPHEALALEUARG
8   ASPGLNILEPROGLUVALALAASNASNGLU
9   LYSALAPROLYSVALVALILELEULYSLYS
10   ALATHRGLUTYRVALLEUSERLEUGLNSER
11   ASPGLUHISLYSLEUILEALAGLULYSGLU
12   GLNLEUARGARGARGARGGLUGLNLEULYS
13   HISASNLEUGLUGLNLEUARGASNSERARG
14   ALA

Samples:

sample_1: c-Terminal v-Myc, [U-95% 13C; U-90% 15N], 0.7 mM; DTT 1 mM; EDTA 1 mM; sodium phosphate 20 mM; sodium chloride 100 mM; H2O 90%; D2O 10%

sample_conditions_1: ionic strength: 120 mM; pH: 6.6; pressure: 1 atm; temperature: 273 K

Experiments:

NameSampleSample stateSample conditions
5D HN(CA)CONHsample_1isotropicsample_conditions_1
5D (HACA)CON(CA)CONHsample_1isotropicsample_conditions_1
5D (H)NCO(NCA)CONHsample_1isotropicsample_conditions_1
5D HNCACOCBsample_1isotropicsample_conditions_1
5D HabCabCONHsample_1isotropicsample_conditions_1
5D H(CC-tocsy)CONHsample_1isotropicsample_conditions_1

Software:

SPARKY, Goddard - chemical shift assignment

NMR spectrometers:

  • Agilent Direct Drive 700 MHz

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts