BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
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BMRB Entry 18848

Title: LTBP1 EGF3-cbEGF15   PubMed: 23494870

Deposition date: 2012-11-20 Original release date: 2013-05-30

Authors: Robertson, Ian; Handford, Penny; Redfield, Christina

Citation: Robertson, Ian; Handford, Penny; Redfield, Christina. "Backbone (1)H, (13)C and (15)N resonance assignment of the C-terminal EGF-cbEGF pair of LTBP1 and flanking residues."  Biomol. NMR Assignments ., .-. (2013).

Assembly members:
LTBP1-E3cb15, polymer, 108 residues, Formula weight is not available
entity_CA, non-polymer, 40.078 Da.

Natural source:   Common Name: Humans   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
LTBP1-E3cb15: SASFEELQAEECGILNGCEN GRCVRVQEGYTCDCFDGYHL DTAKMTCVDVNECDELNNRM SLCKNAKCINTDGSYKCLCL PGYVPSDKPNYCTPLNTALN LEKDSDLE

Data sets:
Data typeCount
13C chemical shifts291
15N chemical shifts95
1H chemical shifts373

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1LTBP1-E3cb151
2Calcium ions2

Entities:

Entity 1, LTBP1-E3cb15 108 residues - Formula weight is not available

1   SERALASERPHEGLUGLULEUGLNALAGLU
2   GLUCYSGLYILELEUASNGLYCYSGLUASN
3   GLYARGCYSVALARGVALGLNGLUGLYTYR
4   THRCYSASPCYSPHEASPGLYTYRHISLEU
5   ASPTHRALALYSMETTHRCYSVALASPVAL
6   ASNGLUCYSASPGLULEUASNASNARGMET
7   SERLEUCYSLYSASNALALYSCYSILEASN
8   THRASPGLYSERTYRLYSCYSLEUCYSLEU
9   PROGLYTYRVALPROSERASPLYSPROASN
10   TYRCYSTHRPROLEUASNTHRALALEUASN
11   LEUGLULYSASPSERASPLEUGLU

Entity 2, Calcium ions - Ca - 40.078 Da.

1   CA

Samples:

sample_1: LTBP1-E3cb15, C13- N15, 2 mM; calcium chloride 10 mM; H2O 95%; D2O 5%

sample_conditions_1: ionic strength: 30 mM; pH: 5.4; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-15N HSQCsample_1isotropicsample_conditions_1
3D CBCA(CO)NHsample_1isotropicsample_conditions_1
3D HNCOsample_1isotropicsample_conditions_1
3D HNCAsample_1isotropicsample_conditions_1
3D CBCANHsample_1isotropicsample_conditions_1
3D HBHA(CO)NHsample_1isotropicsample_conditions_1
3D 1H-15N TOCSYsample_1isotropicsample_conditions_1
3D 1H-15N NOESYsample_1isotropicsample_conditions_1
3D HN(CA)COsample_1isotropicsample_conditions_1

Software:

Analysis v2.2.2, CCPN - chemical shift assignment

NMRPipe vJune 2006 Sun Solaris, Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax - processing

NMR spectrometers:

  • Bruker Avance 500 MHz
  • Home built OMEGA 600 MHz

Related Database Links:

UNP Q14766
GB AAY15036

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts