BMRB Entry 19428
Click here to enlarge.
PDB ID:
Entry in NMR Restraints Grid
Validation report in NRG-CING
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR19428
MolProbity Validation Chart
NMR-STAR file interactive viewer.
NMR-STAR v3 text file.
NMR-STAR v2.1 text file (deprecated)
XML gzip file.
RDF gzip file.
All files associated with the entry
Title: A bacteriophage transcription regulator inhibits bacterial transcription initiation by -factor displacement PubMed: 24482445
Deposition date: 2013-08-14 Original release date: 2014-02-12
Authors: Liu, Bing; Shadrin, Andrey; Sheppard, Carol; Xu, Yingqi; Severinov, Konstantin; Matthews, Steve; Wigneshweraraj, Sivaramesh
Citation: Liu, Bing; Shadrin, Andrey; Sheppard, Carol; Mekler, Vladimir; Xu, Yingqi; Severinov, Konstantin; Matthews, Steve; Wigneshweraraj, Sivaramesh. "A bacteriophage transcription regulator inhibits bacterial transcription initiation by -factor displacement." Nucleic Acids Res. 42, 4294-4305 (2014).
Assembly members:
entity, polymer, 71 residues, 8189.045 Da.
Natural source: Common Name: E. coli Taxonomy ID: 562 Superkingdom: Bacteria Kingdom: not available Genus/species: Escherichia coli
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
entity: MNEFTQISGYVNAFGSQRGS
VLTVKVENDEGWTLVEEDFD
RADYGSDPEFVAEVSSYLKR
NGGIKDLTKVL
- assigned_chemical_shifts
Data type | Count |
13C chemical shifts | 272 |
15N chemical shifts | 64 |
1H chemical shifts | 418 |
Additional metadata:
Assembly:
Entity Assembly ID | Entity Name | Entity ID |
---|---|---|
1 | entity | 1 |
Entities:
Entity 1, entity 71 residues - 8189.045 Da.
1 | MET | ASN | GLU | PHE | THR | GLN | ILE | SER | GLY | TYR | ||||
2 | VAL | ASN | ALA | PHE | GLY | SER | GLN | ARG | GLY | SER | ||||
3 | VAL | LEU | THR | VAL | LYS | VAL | GLU | ASN | ASP | GLU | ||||
4 | GLY | TRP | THR | LEU | VAL | GLU | GLU | ASP | PHE | ASP | ||||
5 | ARG | ALA | ASP | TYR | GLY | SER | ASP | PRO | GLU | PHE | ||||
6 | VAL | ALA | GLU | VAL | SER | SER | TYR | LEU | LYS | ARG | ||||
7 | ASN | GLY | GLY | ILE | LYS | ASP | LEU | THR | LYS | VAL | ||||
8 | LEU |
Samples:
sample_1: entity 5 mM; sodium chloride 5 mM; potassium phosphate 5 mM; H2O 90%; D2O 10%
sample_conditions_1: ionic strength: 10 mM; pH: 8.7; pressure: 1 atm; temperature: 283 K
Experiments:
Name | Sample | Sample state | Sample conditions |
---|---|---|---|
2D 1H-15N HSQC | sample_1 | isotropic | sample_conditions_1 |
3D CBCA(CO)NH | sample_1 | isotropic | sample_conditions_1 |
3D HNCO | sample_1 | isotropic | sample_conditions_1 |
3D HNCA | sample_1 | isotropic | sample_conditions_1 |
3D 1H-15N NOESY | sample_1 | isotropic | sample_conditions_1 |
3D HNCACB | sample_1 | isotropic | sample_conditions_1 |
3D 1H-13C NOESY | sample_1 | isotropic | sample_conditions_1 |
3D HBHA(CO)NH | sample_1 | isotropic | sample_conditions_1 |
3D HCCH-TOCSY | sample_1 | isotropic | sample_conditions_1 |
Software:
ARIA, Linge, O, . - structure solution
NMR spectrometers:
- Bruker DRX 800 MHz
- Bruker DRX 600 MHz
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts