BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 26601

Title: Backbone 1H, 13C, 15N chemical shift assignments for T cell receptor N30 beta subunit   PubMed: 26275917

Deposition date: 2015-07-06 Original release date: 2015-07-14

Authors: Mallis, Robert; Arthanari, Haribabu; Reinherz, Ellis; Wagner, Gerhard

Citation: Mallis, Robert; Reinherz, Ellis; Wagner, Gerhard; Arthanari, Haribabu. "Backbone Resonance Assignment of N15, N30 and D10 T cell Receptor beta subunits"  Biomol. NMR Assign. 10, 35-39 (2016).

Assembly members:
N30_beta_TCR, polymer, 241 residues, Formula weight is not available

Natural source:   Common Name: house mouse   Taxonomy ID: 10090   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Mus musculus

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
N30_beta_TCR: MEAGVTQSPRYAVLQEGQSV SFWCDPISGHDTLYWYQQPR DQGPQLLVYFRDEAVIDNSQ LPSDRFSAVRPKGTNSTLKI QSAKQGDTATYLCASSSGVG TEVFFGKGTRLTVVEDLRNV TPPKVSLFEPSKAEIANKQK ATLVCLARGFFPDHVELSWW VNGKEVHSGVSTDPQAYKES NYSYSLSSRLRVSATFWHNP RNHFRCQVQFHGLSEEDKWP EGSPKPVTQNISAEAWGRAD S

Data sets:
Data typeCount
13C chemical shifts606
15N chemical shifts207
1H chemical shifts207

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1beta subunit1

Entities:

Entity 1, beta subunit 241 residues - Formula weight is not available

1   METGLUALAGLYVALTHRGLNSERPROARG
2   TYRALAVALLEUGLNGLUGLYGLNSERVAL
3   SERPHETRPCYSASPPROILESERGLYHIS
4   ASPTHRLEUTYRTRPTYRGLNGLNPROARG
5   ASPGLNGLYPROGLNLEULEUVALTYRPHE
6   ARGASPGLUALAVALILEASPASNSERGLN
7   LEUPROSERASPARGPHESERALAVALARG
8   PROLYSGLYTHRASNSERTHRLEULYSILE
9   GLNSERALALYSGLNGLYASPTHRALATHR
10   TYRLEUCYSALASERSERSERGLYVALGLY
11   THRGLUVALPHEPHEGLYLYSGLYTHRARG
12   LEUTHRVALVALGLUASPLEUARGASNVAL
13   THRPROPROLYSVALSERLEUPHEGLUPRO
14   SERLYSALAGLUILEALAASNLYSGLNLYS
15   ALATHRLEUVALCYSLEUALAARGGLYPHE
16   PHEPROASPHISVALGLULEUSERTRPTRP
17   VALASNGLYLYSGLUVALHISSERGLYVAL
18   SERTHRASPPROGLNALATYRLYSGLUSER
19   ASNTYRSERTYRSERLEUSERSERARGLEU
20   ARGVALSERALATHRPHETRPHISASNPRO
21   ARGASNHISPHEARGCYSGLNVALGLNPHE
22   HISGLYLEUSERGLUGLUASPLYSTRPPRO
23   GLUGLYSERPROLYSPROVALTHRGLNASN
24   ILESERALAGLUALATRPGLYARGALAASP
25   SER

Samples:

sample_1: N30 beta TCR, [U-13C; U-15N; U-2H], 0.4 mM; sodium chloride 150 mM; sodium phosphate 50 mM; H2O 90%; D2O 10%

sample_conditions_1: ionic strength: 250 mM; pH: 7; pressure: 1 atm; temperature: 298 K

Experiments:

NameSampleSample stateSample conditions
2D 1H-15N HSQCsample_1isotropicsample_conditions_1

Software:

CARA v1.90, Keller and Wuthrich - chemical shift assignment

NMR spectrometers:

  • Bruker Avance 750 MHz
  • Bruker Avance 600 MHz
  • Varian INOVA 600 MHz

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts