BMRB Entry 4062
Chem Shift validation: AVS_anomalous, AVS_full
BMRB Entry DOI: doi:10.13018/BMR4062
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Title: 1H and 15N Resonance Assignments and Secondary Structure of the Carbon Monoxide Complex of Sperm Whale Myoglobin
Deposition date: 1997-09-26 Original release date: 1998-02-25
Authors: Theriault, Yves; Pochapsky, Thomas; Dalvit, Claudio; Chiu, Mark; Sligar, Stephen; Wright, Peter
Citation: Theriault, Yves; Pochapsky, Thomas; Dalvit, Claudio; Chiu, Mark; Sligar, Stephen; Wright, Peter. "1H and 15N Resonance Assignments and Secondary Structure of the Carbon Monoxide Complex of Sperm Whale Myoglobin" J. Biomol. NMR 4, 491-504 (1994).
Assembly members:
apomyoglobin, polymer, 154 residues, Formula weight is not available
PROTOPORPHYRIN IX, non-polymer, 562.658 Da.
CARBON MONOXIDE, non-polymer, 28.010 Da.
Natural source: Common Name: sperm whale Taxonomy ID: 9755 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Physeter catodon
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
apomyoglobin: MVLSEGEWQLVLHVWAKVEA
DVAGHGQDILIRLFKSHPET
LEKFDRFKHLKTEAEMKASE
DLKKHGVTVLTALGAILKKK
GHHEAELKPLAQSHATKHKI
PIKYLEFISEAIIHVLHSRH
PGDFGADAQGAMNKALELFR
KDIAAKYKELGYQG
- assigned_chemical_shifts
| Data type | Count |
| 15N chemical shifts | 148 |
| 1H chemical shifts | 850 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | apomyoglobin | 1 |
| 2 | Iron protoporphyrin IX | 2 |
| 3 | Carbon monoxide | 3 |
Entities:
Entity 1, apomyoglobin 154 residues - Formula weight is not available
| 1 | MET | VAL | LEU | SER | GLU | GLY | GLU | TRP | GLN | LEU | ||||
| 2 | VAL | LEU | HIS | VAL | TRP | ALA | LYS | VAL | GLU | ALA | ||||
| 3 | ASP | VAL | ALA | GLY | HIS | GLY | GLN | ASP | ILE | LEU | ||||
| 4 | ILE | ARG | LEU | PHE | LYS | SER | HIS | PRO | GLU | THR | ||||
| 5 | LEU | GLU | LYS | PHE | ASP | ARG | PHE | LYS | HIS | LEU | ||||
| 6 | LYS | THR | GLU | ALA | GLU | MET | LYS | ALA | SER | GLU | ||||
| 7 | ASP | LEU | LYS | LYS | HIS | GLY | VAL | THR | VAL | LEU | ||||
| 8 | THR | ALA | LEU | GLY | ALA | ILE | LEU | LYS | LYS | LYS | ||||
| 9 | GLY | HIS | HIS | GLU | ALA | GLU | LEU | LYS | PRO | LEU | ||||
| 10 | ALA | GLN | SER | HIS | ALA | THR | LYS | HIS | LYS | ILE | ||||
| 11 | PRO | ILE | LYS | TYR | LEU | GLU | PHE | ILE | SER | GLU | ||||
| 12 | ALA | ILE | ILE | HIS | VAL | LEU | HIS | SER | ARG | HIS | ||||
| 13 | PRO | GLY | ASP | PHE | GLY | ALA | ASP | ALA | GLN | GLY | ||||
| 14 | ALA | MET | ASN | LYS | ALA | LEU | GLU | LEU | PHE | ARG | ||||
| 15 | LYS | ASP | ILE | ALA | ALA | LYS | TYR | LYS | GLU | LEU | ||||
| 16 | GLY | TYR | GLN | GLY |
Entity 2, Iron protoporphyrin IX - C34 H34 N4 O4 - 562.658 Da.
| 1 | PP9 |
Entity 3, Carbon monoxide - C O - 28.010 Da.
| 1 | CMO |
Samples:
sample_one: myoglobin carbon monoxide complex, [U-15N], mM; potassium phosphate 0.05 mM; D20 100%
sample_two: myoglobin carbon monoxide complex, [U-15N], mM; potassium phosphate 0.05 mM; D20 10%; H2O 90%
experimental_conditions_MbCO: pH: 5.6; temperature: 308 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| not available | not available | not available | experimental_conditions_MbCO |
Software:
No software information available
NMR spectrometers:
- Bruker AM-500 500 MHz
- Bruker AMX-600 600MHz MHz
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