BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 4793

Title: Structure-based Functional Classification of Hypothetical Protein MTH538 from Methanobacterium thermoautotrophicum

Deposition date: 2000-07-24 Original release date: 2001-02-15

Authors: Cort, J.; Yee, A.; Edwards, A.; Arrowsmith, C.; Kennedy, M.

Citation: Cort, J.; Yee, A.; Edwards, A.; Arrowsmith, C.; Kennedy, M.. "Structure-based Functional Classification of Hypothetical Protein MTH538 from Methanobacterium thermoautotrophicum"  J. Mol. Biol. 302, 189-203 (2000).

Assembly members:
HYPOTHETICAL PROTEIN MTH538, polymer, 132 residues, 14660 Da.

Natural source:   Common Name: not available   Taxonomy ID: 2166   Superkingdom: Archaea   Kingdom: Euryarchaeota   Genus/species: Methanobacterium thermoautotrophicum

Experimental source:   Production method: recombinant technology   Host organism: Escherichia coli

Entity Sequences (FASTA):
HYPOTHETICAL PROTEIN MTH538: MGSSHHHHHHSSGLVPRGSH MVTAEIRLYITEGEVEDYRV FLERLEQSGLEWRPATPEDA DAVIVLAGLWGTRRDEILGA VDLARKSSKPIITVRPYGLE NVPPELEAVSSEVVGWNPHC IRDALEDALDVI

Data sets:
Data typeCount
1H chemical shifts687
13C chemical shifts422
15N chemical shifts108

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1HYPOTHETICAL PROTEIN MTH5381

Entities:

Entity 1, HYPOTHETICAL PROTEIN MTH538 132 residues - 14660 Da.

1   METGLYSERSERHISHISHISHISHISHIS
2   SERSERGLYLEUVALPROARGGLYSERHIS
3   METVALTHRALAGLUILEARGLEUTYRILE
4   THRGLUGLYGLUVALGLUASPTYRARGVAL
5   PHELEUGLUARGLEUGLUGLNSERGLYLEU
6   GLUTRPARGPROALATHRPROGLUASPALA
7   ASPALAVALILEVALLEUALAGLYLEUTRP
8   GLYTHRARGARGASPGLUILELEUGLYALA
9   VALASPLEUALAARGLYSSERSERLYSPRO
10   ILEILETHRVALARGPROTYRGLYLEUGLU
11   ASNVALPROPROGLULEUGLUALAVALSER
12   SERGLUVALVALGLYTRPASNPROHISCYS
13   ILEARGASPALALEUGLUASPALALEUASP
14   VALILE

Samples:

sample_1: HYPOTHETICAL PROTEIN MTH538, [U-13C; U-15N], 1.5 – 2.0 mM; salt 150 mM; phosphate buffer 25 mM; DTT 5 mM

sample_cond_1: pH: 7.4; temperature: 298 K; ionic strength: 150 mM

Experiments:

NameSampleSample stateSample conditions
4D 13C-separated_NOESYnot availablenot availablenot available
3D 15N-separated_NOESYnot availablenot availablenot available
HMQC-Jnot availablenot availablenot available
3D 13C,15N-simultaneous NOESYnot availablenot availablenot available
1H-15N HSQC D2O exchangenot availablenot availablenot available
HNCOnot availablenot availablenot available
HNCACBnot availablenot availablenot available
CBCACONNHnot availablenot availablenot available
CBCACOCAHAnot availablenot availablenot available
HCCH-TOCSYnot availablenot availablenot available
HCC-TOCSY-NNHnot availablenot availablenot available
CCC-TOCSY-NNHnot availablenot availablenot available

Software:

X-PLOR v3.1 - structure solution

FELIX v98 - processing

VNMR - collection

NMR spectrometers:

  • Varian UNITY plus 500 MHz
  • Varian Inova 600 MHz

Related Database Links:

PDB
GB AAB85044
REF NP_275681 WP_010876177
SP O26638

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts