BMRB

Biological Magnetic Resonance Data Bank


A Repository for Data from NMR Spectroscopy on Proteins, Peptides, Nucleic Acids, and other Biomolecules
Member of WWPDB

BMRB Entry 5862

Title: Assignments of death domain of TRADD   PubMed: 14872135

Deposition date: 2003-07-08 Original release date: 2004-02-13

Authors: Tsao, Desiree

Citation: Tsao, Desiree; Hum, Wah-Tung; Hsu, Sang; Mcguire, Michelle; Malakian, Karl; Lin, Lih-Ling. "Letter to the Editor: Assignment of 1H, 13C and 15N resonances of the death doamin of TRADD"  J. Biomol. NMR 28, 407-408 (2004).

Assembly members:
TRADD death domain, polymer, 124 residues, Formula weight is not available

Natural source:   Common Name: Human   Taxonomy ID: 9606   Superkingdom: Eukaryota   Kingdom: Metazoa   Genus/species: Homo sapiens

Experimental source:   Production method: recombinant technology

Entity Sequences (FASTA):
TRADD death domain: MPPPAQTFLFQGQPVVNRPL SLKDQQTFARSVGLKWRKVG RSLQRGCRALRDPALDSLAY EYEREGLYEQAFQLLRRFVQ AEGRRATLQRLVEALEENEL TSLAEDLLGLTDPNGGLAHH HHHH

Data sets:
Data typeCount
1H chemical shifts714
13C chemical shifts381
15N chemical shifts122

Additional metadata:

  • Assembly
  • Samples and Experiments
  • Software
  • Spectrometers
  • Hide all

Assembly:

Entity Assembly IDEntity NameEntity ID
1death domain of TRADD-DD1

Entities:

Entity 1, death domain of TRADD-DD 124 residues - Formula weight is not available

1   METPROPROPROALAGLNTHRPHELEUPHE
2   GLNGLYGLNPROVALVALASNARGPROLEU
3   SERLEULYSASPGLNGLNTHRPHEALAARG
4   SERVALGLYLEULYSTRPARGLYSVALGLY
5   ARGSERLEUGLNARGGLYCYSARGALALEU
6   ARGASPPROALALEUASPSERLEUALATYR
7   GLUTYRGLUARGGLUGLYLEUTYRGLUGLN
8   ALAPHEGLNLEULEUARGARGPHEVALGLN
9   ALAGLUGLYARGARGALATHRLEUGLNARG
10   LEUVALGLUALALEUGLUGLUASNGLULEU
11   THRSERLEUALAGLUASPLEULEUGLYLEU
12   THRASPPROASNGLYGLYLEUALAHISHIS
13   HISHISHISHIS

Samples:

sample_1: TRADD death domain, [U-15N], 0.6 – 1.1 mM

sample_2: TRADD death domain, [U-15N; U-13C], 0.6 – 1.1 mM; Sodium Acetate 10 mM

Condition_1: pH: 4.2; temperature: 303 K; ionic strength: 0.010 M

Experiments:

NameSampleSample stateSample conditions
1H-15N HSQCnot availablenot availablenot available
1H-13C HSQCnot availablenot availablenot available
HNCACBnot availablenot availablenot available
CBCACONHnot availablenot availablenot available
1H-15N NOESY-HSQCnot availablenot availablenot available
CC(CO)NH-TOCSYnot availablenot availablenot available
HCC(CO)NH-TOCSYnot availablenot availablenot available

Software:

No software information available

NMR spectrometers:

  • BRUKER Avance 600 MHz

Related Database Links:

DBJ BAG38020 BAG52211 BAJ20315
EMBL CAC38018
GB AAA98482 AAH04491 AAP35580 AAP36466 AAS68637
REF NP_003780 XP_002802576 XP_003262922 XP_003812258 XP_003917062
SP Q15628

Download simulated HSQC data in one of the following formats:
CSV: Backbone or all simulated shifts
SPARKY: Backbone or all simulated shifts