BMRB Entry 6148

Name: Resonance Assignments and Secondary Structure of hPrxVI, a 25 kDa 1-Cys Human Peroxiredoxin Enzyme
Published: 2006-07-25

Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6148

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Nicholas Rego and David Koes
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Bioinformatics (2015) 31 (8): 1322-1324 doi:10.1093/bioinformatics/btu829

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Title: Resonance Assignments and Secondary Structure of hPrxVI, a 25 kDa 1-Cys Human Peroxiredoxin Enzyme

Deposition date: 2004-03-17 Original release date: 2006-07-25

Authors: Hong, Eunmi

Citation: Hong, Eunmi; Shin, Joan; Kang, Sang; Tanaka, Toshiyuki; Lee, Weontae. "Letter to the Editor: Resonance Assignments and Secondary Structure of hPrxVI, a 25 kDa 1-Cys Human Peroxiredoxin Enzyme" J. Biomol. NMR 31, 267-268 (2005).

Assembly members:
Human Peroxidase, polymer, 224 residues, 25034.99 Da.

Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens

Experimental source: Production method: recombinant technology

Entity Sequences (FASTA):
Human Peroxidase: MPGGLLLGDVAPNFEANTTV GRIRFHDFLGDSWGILFSHP RDFTPVCTTELGRAAKLAPE FAKRNVKLIALSIDSVEDHL AWSKDINAYNCEEPTEKLPF PIIDDRNRELAILLGMLDPA EKDEKGMPVTARVVFVFGPD KKLKLSILYPATTGRNFDEI LRVVISLQLTAEKRVATPVD WKDGDSVMVLPTIPEEEAKK LFPKGVFTKELPSGKKYLRY TPQP

Data sets:

assigned_chemical_shifts
- shift_set_1

Data type	Count
1H chemical shifts	1378
13C chemical shifts	586
15N chemical shifts	202

Additional metadata:

Assembly
Samples and Experiments
Software
Spectrometers
Hide all

Assembly:

Entity Assembly ID	Entity Name	Entity ID
1	Prxvi monomer	1

Entities:

Entity 1, Prxvi monomer 224 residues - 25034.99 Da.

1

MET

PRO

GLY

LEU

GLY

ASP

VAL

2

ALA

PRO

ASN

PHE

GLU

ALA

ASN

THR

VAL

3

GLY

ARG

ILE

ARG

PHE

HIS

ASP

PHE

LEU

GLY

4

ASP

SER

TRP

GLY

ILE

LEU

PHE

SER

HIS

PRO

5

ARG

ASP

PHE

THR

PRO

VAL

CYS

THR

GLU

6

LEU

GLY

ARG

ALA

LYS

LEU

ALA

PRO

GLU

7

PHE

ALA

LYS

ARG

ASN

VAL

LYS

LEU

ILE

ALA

8

LEU

SER

ILE

ASP

SER

VAL

GLU

ASP

HIS

LEU

9

ALA

TRP

SER

LYS

ASP

ILE

ASN

ALA

TYR

ASN

10

CYS

GLU

PRO

THR

GLU

LYS

LEU

PRO

PHE

11

PRO

ILE

ASP

ARG

ASN

ARG

GLU

LEU

12

ALA

ILE

LEU

GLY

MET

LEU

ASP

PRO

ALA

13

GLU

LYS

ASP

GLU

LYS

GLY

MET

PRO

VAL

THR

14

ALA

ARG

VAL

PHE

VAL

PHE

GLY

PRO

ASP

15

LYS

LEU

LYS

LEU

SER

ILE

LEU

TYR

PRO

16

ALA

THR

GLY

ARG

ASN

PHE

ASP

GLU

ILE

17

LEU

ARG

VAL

ILE

SER

LEU

GLN

LEU

THR

18

ALA

GLU

LYS

ARG

VAL

ALA

THR

PRO

VAL

ASP

19

TRP

LYS

ASP

GLY

ASP

SER

VAL

MET

VAL

LEU

20

PRO

THR

ILE

PRO

GLU

ALA

LYS

21

LEU

PHE

PRO

LYS

GLY

VAL

PHE

THR

LYS

GLU

22

LEU

PRO

SER

GLY

LYS

TYR

LEU

ARG

TYR

23

THR

PRO

GLN

PRO

Samples:

sample_1: Human Peroxidase 1.5 mM

Ex-cond_1: pH: 7.4; temperature: 303 K

Experiments:

Name	Sample	Sample state	Sample conditions
15N-HSQC	sample_1	not available	Ex-cond_1
15N-NOESY	sample_1	not available	Ex-cond_1
HNHA	sample_1	not available	Ex-cond_1
HNCA	sample_1	not available	Ex-cond_1
HNcoCA	sample_1	not available	Ex-cond_1
HNCACB	sample_1	not available	Ex-cond_1
HNcoCACB	sample_1	not available	Ex-cond_1
HNCO	sample_1	not available	Ex-cond_1
HNcaCO	sample_1	not available	Ex-cond_1
CCCcoNH-TOCSY	sample_1	not available	Ex-cond_1
HCCH-TOCSY	sample_1	not available	Ex-cond_1
13C-NOESY	sample_1	not available	Ex-cond_1

Software:

No software information available

NMR spectrometers:

Bruker DRX 800 MHz
Bruker DRX 600 MHz

PDB	1PRX
DBJ	BAA03496 BAE73101 BAF82041 BAG09605
EMBL	CAH92320
GB	AAH35857 AAH53550 ABB02185 ACJ13706 ADQ32658
REF	NP_001126361 NP_001253014 NP_004896 XP_002760406 XP_003258941
SP	P30041 Q2PFL9 Q5R7E0

Biological Magnetic Resonance Data Bank