BMRB Entry 6345
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6345
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Title: Solution Structure of YKR049C PubMed: 16202234
Deposition date: 2004-10-11 Original release date: 2007-03-22
Authors: Jung, Jin-Won; Lee, Chul-Jin; Yee, Adelinda; Arrowsmith, Cheryl; Tanaka, Toshi; Lee, Weontae
Citation: Jung, Jin-Won; Yee, Adelinda; Wu, B.; Arrowsmith, Cheryl; Lee, Weontae. "Solution Structure of YKR049C, a Putative Redox Protein from Saccharomyces cerevisiae." J. Biochem. Mol. Biol. 38, 550-554 (2005).
Assembly members:
ykr049c, polymer, 133 residues, 15650 Da.
Natural source: Common Name: baker Taxonomy ID: 4932 Superkingdom: not available Kingdom: not available Genus/species: Eukaryota Fungi
Experimental source: Production method: recombinant technology Host organism: Escherichia coli
Entity Sequences (FASTA):
ykr049c: MSFWKTLQRQPRTISLFTND
IASNIKSQKCLQLLKGDVSH
RFDVEIANRFPTWDQLQYMR
TSCPQGPVSLQRQIPKLDSV
LKYKHTDPTFGMDLQKCVQR
GLWNPKEALWVDWENKLVGN
EPADIDKYIIQRK
- assigned_chemical_shifts
| Data type | Count |
| 1H chemical shifts | 742 |
| 13C chemical shifts | 506 |
| 15N chemical shifts | 121 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | ykr049c | 1 |
Entities:
Entity 1, ykr049c 133 residues - 15650 Da.
| 1 | MET | SER | PHE | TRP | LYS | THR | LEU | GLN | ARG | GLN | ||||
| 2 | PRO | ARG | THR | ILE | SER | LEU | PHE | THR | ASN | ASP | ||||
| 3 | ILE | ALA | SER | ASN | ILE | LYS | SER | GLN | LYS | CYS | ||||
| 4 | LEU | GLN | LEU | LEU | LYS | GLY | ASP | VAL | SER | HIS | ||||
| 5 | ARG | PHE | ASP | VAL | GLU | ILE | ALA | ASN | ARG | PHE | ||||
| 6 | PRO | THR | TRP | ASP | GLN | LEU | GLN | TYR | MET | ARG | ||||
| 7 | THR | SER | CYS | PRO | GLN | GLY | PRO | VAL | SER | LEU | ||||
| 8 | GLN | ARG | GLN | ILE | PRO | LYS | LEU | ASP | SER | VAL | ||||
| 9 | LEU | LYS | TYR | LYS | HIS | THR | ASP | PRO | THR | PHE | ||||
| 10 | GLY | MET | ASP | LEU | GLN | LYS | CYS | VAL | GLN | ARG | ||||
| 11 | GLY | LEU | TRP | ASN | PRO | LYS | GLU | ALA | LEU | TRP | ||||
| 12 | VAL | ASP | TRP | GLU | ASN | LYS | LEU | VAL | GLY | ASN | ||||
| 13 | GLU | PRO | ALA | ASP | ILE | ASP | LYS | TYR | ILE | ILE | ||||
| 14 | GLN | ARG | LYS |
Samples:
sample: ykr049c, [U-95% 13C; U-90% 15N], 1.5 mM; Sodium Phosphate 25 mM; Sodium Chloride 150 mM; DTT 1 mM
sample_conditions: pH: 6.5; temperature: 298 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| HNCACB | sample | not available | sample_conditions |
| 1H15N HSQC (example) | sample | not available | sample_conditions |
| CBCA(CO)NH | sample | not available | sample_conditions |
| HNCO | sample | not available | sample_conditions |
| CC(CO)NH | sample | not available | sample_conditions |
| H(CCCO)NH | sample | not available | sample_conditions |
| HCCH-TOCSY | sample | not available | sample_conditions |
| HNCA | sample | not available | sample_conditions |
Software:
NMRPipe v2.3 - data processing
NMR spectrometers:
- Bruker Avance 500 MHz
- Bruker Avance 600 MHz
- Bruker DMX 800 MHz
- Varian Unity 600 MHz
Related Database Links:
| PDB | |
| DBJ | GAA24770 |
| EMBL | CAA82127 CAY81129 |
| GB | AAS56642 AHY76285 EDN59952 EDV13131 EEU07595 |
| REF | NP_012975 |
| SP | P36141 |
| TPG | DAA09200 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts