BMRB Entry 6502
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR6502
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Title: DNA binding domain in XPF/ERCC-1 complex
Deposition date: 2005-02-16 Original release date: 2006-02-17
Authors: Masuyama, Mika; Ishino, Sonoko; Nishino, Tatsuya; Moriuchi, Hiroshi; Ueno, Hiroshi; Morikawa, Kousuke; Tate, Shin-ichi
Citation: Masuyama, Mika; Ishino, Sonoko; Nishino, Tatsuya; Moriuchi, Hiroshi; Ueno, Hiroshi; Morikawa, Kousuke; Tate, Shin-ichi. "Resonance assignments for the DNA binding domain of ERCC-1/XPF heterodimer" J. Biomol. NMR 32, 175-175 (2005).
Assembly members:
XPF subunit, polymer, 100 residues, Formula weight is not available
ERCC-1 subunit, polymer, 83 residues, Formula weight is not available
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
XPF subunit: GSHMPQPDAATALAITADSE
TLPESEKYNPGPQDFLLKMP
GVNAKNCRSLMHHVKNIAEL
AALSQDELTSILGNAANAKQ
LYDFIHTSFAEVVSKGKGKK
ERCC-1 subunit: GSHMPADLLMEKLEQDFVSR
VTECLTTVKSVNKTDSQTLL
TTFGSLEQLIAASREDLALC
PGLGPQKARRLFDVLHEPFL
KVP
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 622 |
| 15N chemical shifts | 172 |
| 1H chemical shifts | 1085 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | XPF subunit | 1 |
| 2 | ERCC-1 subunit | 2 |
Entities:
Entity 1, XPF subunit 100 residues - Formula weight is not available
number 1-100 corresponds to XPF subunit. In each fragment, the first four residues (GSHM) are artificially added from expression vector.
| 1 | GLY | SER | HIS | MET | PRO | GLN | PRO | ASP | ALA | ALA | |
| 2 | THR | ALA | LEU | ALA | ILE | THR | ALA | ASP | SER | GLU | |
| 3 | THR | LEU | PRO | GLU | SER | GLU | LYS | TYR | ASN | PRO | |
| 4 | GLY | PRO | GLN | ASP | PHE | LEU | LEU | LYS | MET | PRO | |
| 5 | GLY | VAL | ASN | ALA | LYS | ASN | CYS | ARG | SER | LEU | |
| 6 | MET | HIS | HIS | VAL | LYS | ASN | ILE | ALA | GLU | LEU | |
| 7 | ALA | ALA | LEU | SER | GLN | ASP | GLU | LEU | THR | SER | |
| 8 | ILE | LEU | GLY | ASN | ALA | ALA | ASN | ALA | LYS | GLN | |
| 9 | LEU | TYR | ASP | PHE | ILE | HIS | THR | SER | PHE | ALA | |
| 10 | GLU | VAL | VAL | SER | LYS | GLY | LYS | GLY | LYS | LYS |
Entity 2, ERCC-1 subunit 83 residues - Formula weight is not available
In each fragment, the first four residues (GSHM) are artificially added from expression vector.
| 1 | GLY | SER | HIS | MET | PRO | ALA | ASP | LEU | LEU | MET | ||||
| 2 | GLU | LYS | LEU | GLU | GLN | ASP | PHE | VAL | SER | ARG | ||||
| 3 | VAL | THR | GLU | CYS | LEU | THR | THR | VAL | LYS | SER | ||||
| 4 | VAL | ASN | LYS | THR | ASP | SER | GLN | THR | LEU | LEU | ||||
| 5 | THR | THR | PHE | GLY | SER | LEU | GLU | GLN | LEU | ILE | ||||
| 6 | ALA | ALA | SER | ARG | GLU | ASP | LEU | ALA | LEU | CYS | ||||
| 7 | PRO | GLY | LEU | GLY | PRO | GLN | LYS | ALA | ARG | ARG | ||||
| 8 | LEU | PHE | ASP | VAL | LEU | HIS | GLU | PRO | PHE | LEU | ||||
| 9 | LYS | VAL | PRO |