BMRB Entry 7024
Chem Shift validation: AVS_anomalous, AVS_full, LACS
BMRB Entry DOI: doi:10.13018/BMR7024
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Title: Resonance assignments of the 34kD rabbitpox vCCI:human MIP-1b complex PubMed: 16804766
Deposition date: 2006-03-20 Original release date: 2006-08-07
Authors: Zhang, Li; LiWang, Patricia
Citation: Zhang, Li; LiWang, Patricia. "Resonance assignments of the 34 kD rabbitpox vCCI:human MIP-1beta complex" J. Biomol. NMR 36, 49-49 (2006).
Assembly members:
human MIP-1b, polymer, 69 residues, 7619 Da.
rabbitpox vCCI, polymer, 242 residues, 26129 Da.
Natural source: Common Name: Human Taxonomy ID: 9606 Superkingdom: Eukaryota Kingdom: Metazoa Genus/species: Homo sapiens
Experimental source: Production method: recombinant technology
Entity Sequences (FASTA):
human MIP-1b: APMGSDPPTACCFSYTARKL
PRNFVVDYYETSSLCSQPAV
VFQTAASAQVCADPSESWVQ
EYVYDLELN
rabbitpox vCCI: MPASLQQSSSSSSSCTEEEN
KHHMGIDVIIKVTKQDQTPT
NDKICQSVTEITESESDPDP
EVESEDDSTSVEDVDPPTTY
YSIIGGGLRMNFGFTKCPQI
KSISESADGNTVNARLSSVS
PGQGKDSPAITHEEALAMIK
DCEVSIDIRCSEEEKDSDIK
THPVLGSNISHKKVSYEDII
GSTIVDTKCVKNLEFSVRIG
DMCKESSELEVKDGFKYVDG
SASKGATDDTSLIDSTKLKA
CV
- assigned_chemical_shifts
| Data type | Count |
| 13C chemical shifts | 782 |
| 15N chemical shifts | 270 |
| 1H chemical shifts | 610 |
Additional metadata:
Assembly:
| Entity Assembly ID | Entity Name | Entity ID |
|---|---|---|
| 1 | human MIP-1b | 1 |
| 2 | rabbitpox vCCI | 2 |
Entities:
Entity 1, human MIP-1b 69 residues - 7619 Da.
| 1 | ALA | PRO | MET | GLY | SER | ASP | PRO | PRO | THR | ALA | ||||
| 2 | CYS | CYS | PHE | SER | TYR | THR | ALA | ARG | LYS | LEU | ||||
| 3 | PRO | ARG | ASN | PHE | VAL | VAL | ASP | TYR | TYR | GLU | ||||
| 4 | THR | SER | SER | LEU | CYS | SER | GLN | PRO | ALA | VAL | ||||
| 5 | VAL | PHE | GLN | THR | ALA | ALA | SER | ALA | GLN | VAL | ||||
| 6 | CYS | ALA | ASP | PRO | SER | GLU | SER | TRP | VAL | GLN | ||||
| 7 | GLU | TYR | VAL | TYR | ASP | LEU | GLU | LEU | ASN |
Entity 2, rabbitpox vCCI 242 residues - 26129 Da.
| 1 | MET | PRO | ALA | SER | LEU | GLN | GLN | SER | SER | SER | ||||
| 2 | SER | SER | SER | SER | CYS | THR | GLU | GLU | GLU | ASN | ||||
| 3 | LYS | HIS | HIS | MET | GLY | ILE | ASP | VAL | ILE | ILE | ||||
| 4 | LYS | VAL | THR | LYS | GLN | ASP | GLN | THR | PRO | THR | ||||
| 5 | ASN | ASP | LYS | ILE | CYS | GLN | SER | VAL | THR | GLU | ||||
| 6 | ILE | THR | GLU | SER | GLU | SER | ASP | PRO | ASP | PRO | ||||
| 7 | GLU | VAL | GLU | SER | GLU | ASP | ASP | SER | THR | SER | ||||
| 8 | VAL | GLU | ASP | VAL | ASP | PRO | PRO | THR | THR | TYR | ||||
| 9 | TYR | SER | ILE | ILE | GLY | GLY | GLY | LEU | ARG | MET | ||||
| 10 | ASN | PHE | GLY | PHE | THR | LYS | CYS | PRO | GLN | ILE | ||||
| 11 | LYS | SER | ILE | SER | GLU | SER | ALA | ASP | GLY | ASN | ||||
| 12 | THR | VAL | ASN | ALA | ARG | LEU | SER | SER | VAL | SER | ||||
| 13 | PRO | GLY | GLN | GLY | LYS | ASP | SER | PRO | ALA | ILE | ||||
| 14 | THR | HIS | GLU | GLU | ALA | LEU | ALA | MET | ILE | LYS | ||||
| 15 | ASP | CYS | GLU | VAL | SER | ILE | ASP | ILE | ARG | CYS | ||||
| 16 | SER | GLU | GLU | GLU | LYS | ASP | SER | ASP | ILE | LYS | ||||
| 17 | THR | HIS | PRO | VAL | LEU | GLY | SER | ASN | ILE | SER | ||||
| 18 | HIS | LYS | LYS | VAL | SER | TYR | GLU | ASP | ILE | ILE | ||||
| 19 | GLY | SER | THR | ILE | VAL | ASP | THR | LYS | CYS | VAL | ||||
| 20 | LYS | ASN | LEU | GLU | PHE | SER | VAL | ARG | ILE | GLY | ||||
| 21 | ASP | MET | CYS | LYS | GLU | SER | SER | GLU | LEU | GLU | ||||
| 22 | VAL | LYS | ASP | GLY | PHE | LYS | TYR | VAL | ASP | GLY | ||||
| 23 | SER | ALA | SER | LYS | GLY | ALA | THR | ASP | ASP | THR | ||||
| 24 | SER | LEU | ILE | ASP | SER | THR | LYS | LEU | LYS | ALA | ||||
| 25 | CYS | VAL |
Samples:
sample_1: human MIP-1b, [U-13C; U-15N], 1 mM; rabbitpox vCCI, [U-95% 2H; U-13C; U-15N], 1 mM
conditions_1: pH: 7; temperature: 310 K
Experiments:
| Name | Sample | Sample state | Sample conditions |
|---|---|---|---|
| 15N-HSQC | sample_1 | not available | conditions_1 |
| 13C-HSQC | sample_1 | not available | conditions_1 |
| HNCA | sample_1 | not available | conditions_1 |
| HN(CO)CA | sample_1 | not available | conditions_1 |
| HNCACB | sample_1 | not available | conditions_1 |
| HN(CO)CACB | sample_1 | not available | conditions_1 |
| HNCO | sample_1 | not available | conditions_1 |
| CBCA(CO)NH | sample_1 | not available | conditions_1 |
| CBCANH | sample_1 | not available | conditions_1 |
| HBHA(CO)NH | sample_1 | not available | conditions_1 |
| HCCH-COSY | sample_1 | not available | conditions_1 |
Software:
No software information available
NMR spectrometers:
- Varian Inova 600 MHz
- Varian Inova 750 MHz
Related Database Links:
| BMRB | 6809 |
| PDB | |
| DBJ | BAA00487 |
| EMBL | CAA64086 CAD90757 CAM58165 CAM58393 |
| GB | AAA47970 AAA48229 AAB53969 AAF33853 AAF34094 |
| REF | YP_232883 YP_233100 |
| SP | P19063 P21090 Q805H7 |
Download simulated HSQC data in one of the following formats:
CSV: Backbone
or all simulated shifts
SPARKY: Backbone
or all simulated shifts