==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA/ANTIBIOTIC 01-MAY-95 209D . COMPND 2 MOLECULE: DNA (5'-D(*GP*AP*AP*GP*CP*TP*TP*C)-3'); . SOURCE 2 SYNTHETIC: YES; . AUTHOR M.SHINOMIYA,W.CHU,R.G.CARLSON,R.F.WEAVER,F.TAKUSAGAWA . 10 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1040.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 3 30.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 20.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 C T 0 0 99 0, 0.0 3,-0.4 0, 0.0 4,-0.2 0.000 360.0 360.0 360.0 127.0 4.1 20.0 10.0 2 2 C X B -A 8 0A 53 6,-1.9 6,-1.8 1,-0.3 2,-0.2 -0.530 360.0 -59.2 96.3-134.8 5.3 17.0 11.6 3 3 C P S S+ 0 0 121 0, 0.0 -1,-0.3 0, 0.0 2,-0.0 0.219 134.8 41.5 -58.2 128.9 8.1 16.3 12.5 4 4 C X 0 0 63 -3,-0.4 -2,-0.1 -2,-0.2 4,-0.0 0.639 360.0 360.0-124.7-174.8 8.5 16.8 9.5 5 5 C X 0 0 182 -4,-0.2 -3,-0.2 -3,-0.1 0, 0.0 0.582 360.0 360.0 47.2 360.0 7.4 19.1 6.6 6 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 7 7 C T > 0 0 100 0, 0.0 3,-0.6 0, 0.0 4,-0.1 0.000 360.0 360.0 360.0 152.6 2.8 19.5 15.2 8 8 C X B 3 -A 2 0A 72 -6,-1.8 -6,-1.9 1,-0.3 2,-0.2 -0.757 360.0 -72.2 89.4-104.0 0.9 17.2 12.9 9 9 C P T 3 S+ 0 0 102 0, 0.0 -1,-0.3 0, 0.0 2,-0.0 0.459 133.4 34.8 -65.9 142.9 -1.2 19.2 11.9 10 10 C X < 0 0 77 -3,-0.6 -2,-0.1 -2,-0.2 -8,-0.0 0.711 360.0 360.0-111.2 172.6 -2.6 19.1 14.7 11 11 C X 0 0 171 -4,-0.1 -3,-0.1 -3,-0.1 -9,-0.1 0.950 360.0 360.0 58.7 360.0 -0.7 18.7 18.1