==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN/RNA 02-AUG-99 484D . COMPND 2 MOLECULE: BASIC REV PEPTIDE; . SOURCE 2 SYNTHETIC: YES; . AUTHOR X.YE,A.A.GORIN,R.FREDERICK,W.HU,A.MAJUMDAR,W.XU,G.MCLENDON, . 17 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2897.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 4 23.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 17.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 5.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 34 A T 0 0 168 0, 0.0 2,-1.3 0, 0.0 3,-0.3 0.000 360.0 360.0 360.0 -80.3 45.6 4.2 -18.5 2 35 A R + 0 0 164 1,-0.2 4,-0.1 2,-0.1 5,-0.1 -0.644 360.0 134.9 -80.2 89.6 47.1 3.4 -15.0 3 36 A Q S > S+ 0 0 150 -2,-1.3 4,-2.1 3,-0.1 -1,-0.2 0.853 71.5 33.2-101.3 -66.2 46.4 6.8 -13.4 4 37 A A T 4 S+ 0 0 87 -3,-0.3 -2,-0.1 1,-0.2 0, 0.0 0.743 114.1 61.2 -65.8 -30.9 45.0 6.1 -9.9 5 38 A R T 4 S+ 0 0 184 1,-0.1 -1,-0.2 3,-0.1 -2,-0.1 0.912 115.8 30.4 -61.2 -50.7 47.1 2.8 -9.5 6 39 A R T 4 S+ 0 0 160 -3,-0.2 -2,-0.2 -4,-0.1 2,-0.2 0.957 107.7 75.4 -75.5 -58.6 50.5 4.7 -9.7 7 40 A N < - 0 0 126 -4,-2.1 2,-0.3 -5,-0.1 -4,-0.0 -0.404 69.0-163.7 -65.2 127.7 49.5 8.2 -8.2 8 41 A R - 0 0 193 1,-0.2 3,-0.1 -2,-0.2 -3,-0.1 -0.810 15.1-136.3-115.8 153.7 49.1 8.1 -4.4 9 42 A R - 0 0 208 -2,-0.3 2,-0.4 1,-0.2 -1,-0.2 0.828 64.8 -36.0 -74.1-113.5 47.5 10.5 -1.9 10 43 A R + 0 0 202 2,-0.0 2,-0.2 0, 0.0 -1,-0.2 -0.988 68.5 140.2-128.8 124.0 49.4 11.3 1.4 11 44 A R - 0 0 168 -2,-0.4 2,-0.4 -3,-0.1 -3,-0.0 -0.831 33.9-146.9-163.1 119.6 51.6 8.7 3.3 12 45 A W - 0 0 215 -2,-0.2 2,-0.8 2,-0.0 -2,-0.0 -0.765 10.9-138.8 -94.2 134.5 55.0 9.5 5.0 13 46 A R - 0 0 130 -2,-0.4 2,-1.8 1,-0.0 -2,-0.0 -0.853 11.9-152.6 -91.9 104.7 57.8 6.8 5.1 14 47 A E - 0 0 149 -2,-0.8 -1,-0.0 1,-0.1 -2,-0.0 -0.663 59.9 -80.4 -85.5 79.9 59.2 7.3 8.7 15 48 A R S S+ 0 0 232 -2,-1.8 -1,-0.1 1,-0.1 -2,-0.0 0.672 70.6 172.5 12.9 70.6 62.6 6.0 7.4 16 49 A Q 0 0 97 1,-0.3 -1,-0.1 0, 0.0 -2,-0.0 0.936 360.0 360.0 -59.9 -57.1 61.5 2.3 7.6 17 50 A R 0 0 264 0, 0.0 -1,-0.3 0, 0.0 -2,-0.1 -0.992 360.0 360.0-121.0 360.0 64.5 0.6 6.0