==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOMAL PROTEIN 27-JAN-98 1A32 . COMPND 2 MOLECULE: RIBOSOMAL PROTEIN S15; . SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; . AUTHOR W.M.CLEMONS JUNIOR,C.DAVIES,S.W.WHITE,V.RAMAKRISHNAN . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7308.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 72.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 57 67.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A L 0 0 167 0, 0.0 2,-0.1 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 114.5 -9.7 -13.3 53.4 2 3 A T > - 0 0 86 1,-0.1 4,-2.6 4,-0.0 5,-0.2 -0.415 360.0-117.7 -77.1 157.1 -10.4 -9.6 52.8 3 4 A Q H > S+ 0 0 139 2,-0.2 4,-3.2 1,-0.2 5,-0.3 0.890 115.4 56.2 -58.8 -42.8 -10.6 -8.2 49.3 4 5 A E H > S+ 0 0 111 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.965 113.1 38.1 -53.2 -59.3 -7.6 -6.0 50.1 5 6 A R H > S+ 0 0 99 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.833 116.3 53.6 -64.1 -32.7 -5.4 -9.0 51.0 6 7 A K H X S+ 0 0 120 -4,-2.6 4,-1.7 1,-0.2 -1,-0.2 0.901 113.7 41.6 -69.0 -40.3 -6.9 -11.1 48.3 7 8 A R H X S+ 0 0 138 -4,-3.2 4,-1.7 2,-0.2 5,-0.2 0.770 114.0 52.8 -76.3 -30.8 -6.1 -8.5 45.6 8 9 A E H X S+ 0 0 73 -4,-2.2 4,-2.8 -5,-0.3 5,-0.2 0.943 109.3 48.2 -69.5 -47.6 -2.7 -7.8 47.1 9 10 A I H X S+ 0 0 61 -4,-2.6 4,-2.4 1,-0.2 -2,-0.2 0.912 107.6 59.5 -58.2 -40.7 -1.8 -11.5 47.1 10 11 A I H < S+ 0 0 92 -4,-1.7 4,-0.4 2,-0.2 -1,-0.2 0.940 115.0 30.5 -53.8 -57.4 -3.0 -11.6 43.4 11 12 A E H >< S+ 0 0 124 -4,-1.7 3,-1.6 1,-0.2 -2,-0.2 0.954 116.1 59.9 -69.7 -44.3 -0.6 -9.0 42.1 12 13 A Q H 3< S+ 0 0 100 -4,-2.8 -2,-0.2 1,-0.3 -1,-0.2 0.823 116.6 33.5 -50.7 -37.4 2.2 -9.8 44.6 13 14 A F T 3< S+ 0 0 155 -4,-2.4 2,-0.7 -5,-0.2 -1,-0.3 0.272 85.4 109.5-108.7 11.8 2.3 -13.4 43.3 14 15 A K < - 0 0 126 -3,-1.6 2,-0.4 -4,-0.4 -4,-0.0 -0.800 68.8-131.8 -87.4 118.9 1.5 -13.0 39.5 15 16 A V + 0 0 127 -2,-0.7 2,-0.3 0, 0.0 -2,-0.1 -0.641 58.3 58.4 -77.8 127.6 4.8 -13.8 37.8 16 17 A H S S- 0 0 164 -2,-0.4 -2,-0.0 1,-0.1 0, 0.0 -0.911 76.5 -44.6 151.9-170.9 6.0 -11.3 35.1 17 18 A E + 0 0 149 -2,-0.3 -1,-0.1 1,-0.1 0, 0.0 0.645 64.7 109.1 -64.1-144.8 6.9 -7.7 34.0 18 19 A N + 0 0 126 2,-0.0 -1,-0.1 1,-0.0 0, 0.0 0.558 59.7 111.5 75.2 10.9 5.3 -4.3 34.8 19 20 A D + 0 0 123 1,-0.1 -2,-0.1 2,-0.0 -1,-0.0 0.980 21.3 136.2 -72.3 -77.9 8.3 -3.6 37.0 20 21 A T + 0 0 55 1,-0.2 -1,-0.1 5,-0.0 -3,-0.0 0.714 24.2 130.7 31.3 37.5 10.1 -0.8 35.1 21 22 A G + 0 0 62 4,-0.0 -1,-0.2 5,-0.0 3,-0.1 0.292 46.1 97.8 -93.5 7.4 10.7 1.1 38.3 22 23 A S S > S- 0 0 34 1,-0.1 4,-2.5 0, 0.0 5,-0.2 -0.803 73.6-138.7-100.9 139.9 14.4 1.4 37.4 23 24 A P H > S+ 0 0 22 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.910 107.9 49.7 -57.9 -44.3 15.9 4.6 35.8 24 25 A E H > S+ 0 0 39 2,-0.2 4,-2.3 1,-0.2 5,-0.1 0.889 111.2 47.3 -63.1 -44.5 17.9 2.3 33.5 25 26 A V H > S+ 0 0 56 2,-0.2 4,-2.7 1,-0.2 -1,-0.2 0.881 113.1 48.9 -67.4 -38.5 15.0 0.2 32.4 26 27 A Q H X S+ 0 0 64 -4,-2.5 4,-2.2 2,-0.2 -2,-0.2 0.932 113.0 47.7 -66.1 -42.4 12.8 3.3 31.7 27 28 A I H X S+ 0 0 0 -4,-2.5 4,-2.1 -5,-0.2 -2,-0.2 0.882 114.9 46.6 -65.3 -38.3 15.7 4.8 29.7 28 29 A A H X S+ 0 0 33 -4,-2.3 4,-2.6 2,-0.2 -2,-0.2 0.897 110.3 50.8 -71.5 -43.0 16.1 1.5 27.8 29 30 A I H X S+ 0 0 72 -4,-2.7 4,-1.6 2,-0.2 -2,-0.2 0.911 113.6 46.6 -61.5 -43.1 12.4 0.9 27.1 30 31 A L H X S+ 0 0 11 -4,-2.2 4,-3.1 -5,-0.2 5,-0.2 0.938 110.4 52.3 -63.6 -46.3 12.2 4.5 25.7 31 32 A T H X S+ 0 0 7 -4,-2.1 4,-2.8 1,-0.2 5,-0.2 0.924 108.4 51.4 -55.7 -46.1 15.4 4.0 23.7 32 33 A E H X S+ 0 0 119 -4,-2.6 4,-1.8 1,-0.2 -1,-0.2 0.849 113.7 44.0 -60.3 -38.3 13.9 0.9 22.1 33 34 A Q H X S+ 0 0 87 -4,-1.6 4,-2.8 2,-0.2 -1,-0.2 0.888 113.6 50.0 -75.5 -37.2 10.7 2.7 21.2 34 35 A I H X S+ 0 0 4 -4,-3.1 4,-1.6 1,-0.2 -2,-0.2 0.878 113.7 46.6 -67.4 -36.8 12.6 5.8 19.9 35 36 A N H X S+ 0 0 82 -4,-2.8 4,-1.5 -5,-0.2 -1,-0.2 0.863 113.8 47.5 -72.3 -40.2 14.8 3.4 17.8 36 37 A N H X S+ 0 0 71 -4,-1.8 4,-1.5 -5,-0.2 -2,-0.2 0.936 112.8 48.3 -66.8 -46.4 11.8 1.5 16.5 37 38 A L H X S+ 0 0 33 -4,-2.8 4,-2.2 1,-0.2 -2,-0.2 0.832 111.3 50.7 -64.0 -33.8 9.9 4.6 15.6 38 39 A N H X S+ 0 0 74 -4,-1.6 4,-0.8 2,-0.2 -1,-0.2 0.823 109.2 49.6 -73.7 -32.5 12.9 6.1 13.9 39 40 A E H X S+ 0 0 109 -4,-1.5 4,-0.7 2,-0.2 -2,-0.2 0.759 112.1 51.9 -74.6 -25.4 13.4 3.0 11.8 40 41 A H H >X S+ 0 0 71 -4,-1.5 3,-0.6 2,-0.2 4,-0.6 0.910 109.3 45.8 -74.6 -46.4 9.7 3.2 11.0 41 42 A L H 3< S+ 0 0 15 -4,-2.2 -2,-0.2 1,-0.2 -1,-0.2 0.700 101.3 71.7 -68.2 -20.3 9.8 6.9 9.9 42 43 A R H 3< S+ 0 0 187 -4,-0.8 3,-0.3 1,-0.2 -1,-0.2 0.901 110.8 28.3 -62.6 -39.7 12.9 5.9 7.8 43 44 A V H << S+ 0 0 97 -4,-0.7 -1,-0.2 -3,-0.6 -2,-0.2 0.396 121.4 55.9-103.0 1.0 10.6 4.0 5.4 44 45 A H >< + 0 0 67 -4,-0.6 3,-2.1 1,-0.1 -1,-0.2 -0.441 58.5 158.8-129.0 57.9 7.5 6.2 6.0 45 46 A K T 3 S+ 0 0 162 -3,-0.3 -1,-0.1 1,-0.3 -4,-0.1 0.694 70.3 63.7 -54.0 -25.3 8.9 9.7 5.1 46 47 A K T 3 S+ 0 0 148 -3,-0.1 -1,-0.3 2,-0.0 -5,-0.1 0.608 77.7 117.7 -77.1 -13.9 5.3 10.9 4.5 47 48 A D < + 0 0 10 -3,-2.1 -3,-0.0 1,-0.1 -6,-0.0 -0.090 28.0 164.3 -53.7 152.9 4.2 10.3 8.1 48 49 A H > + 0 0 138 3,-0.0 4,-0.5 0, 0.0 3,-0.5 0.452 67.4 63.0-140.6 -32.5 3.0 13.3 10.2 49 50 A H H > S+ 0 0 135 1,-0.2 4,-0.7 2,-0.2 3,-0.4 0.836 99.4 52.8 -70.7 -37.4 1.2 11.7 13.2 50 51 A S H > S+ 0 0 25 1,-0.2 4,-1.7 2,-0.2 -1,-0.2 0.548 92.0 79.0 -76.6 -9.3 4.2 9.8 14.7 51 52 A R H > S+ 0 0 89 -3,-0.5 4,-1.9 2,-0.2 -1,-0.2 0.937 92.8 45.8 -65.1 -48.7 6.3 13.0 14.7 52 53 A R H X S+ 0 0 154 -4,-0.5 4,-1.9 -3,-0.4 -1,-0.2 0.919 111.9 52.7 -60.9 -44.9 4.8 14.5 17.9 53 54 A G H X S+ 0 0 33 -4,-0.7 4,-1.8 1,-0.2 -1,-0.2 0.867 107.5 51.0 -59.5 -41.0 5.0 11.1 19.7 54 55 A L H X S+ 0 0 21 -4,-1.7 4,-2.3 1,-0.2 -1,-0.2 0.905 108.1 52.7 -64.7 -41.2 8.7 10.7 19.0 55 56 A L H X S+ 0 0 119 -4,-1.9 4,-2.1 1,-0.2 -1,-0.2 0.878 107.7 51.6 -63.8 -38.0 9.5 14.2 20.3 56 57 A K H X S+ 0 0 161 -4,-1.9 4,-2.5 2,-0.2 -1,-0.2 0.901 110.5 48.1 -64.9 -42.6 7.7 13.5 23.5 57 58 A M H X S+ 0 0 35 -4,-1.8 4,-1.7 2,-0.2 -2,-0.2 0.875 110.5 51.2 -66.3 -39.4 9.6 10.2 24.1 58 59 A V H X S+ 0 0 27 -4,-2.3 4,-1.6 2,-0.2 -2,-0.2 0.920 113.0 46.1 -63.8 -42.1 12.9 12.0 23.3 59 60 A G H X S+ 0 0 19 -4,-2.1 4,-1.8 1,-0.2 -2,-0.2 0.890 110.5 51.4 -67.3 -42.7 12.1 14.7 25.8 60 61 A K H X S+ 0 0 99 -4,-2.5 4,-2.0 1,-0.2 -1,-0.2 0.837 110.8 50.6 -63.4 -30.8 11.0 12.2 28.5 61 62 A R H X S+ 0 0 36 -4,-1.7 4,-2.4 2,-0.2 -1,-0.2 0.828 106.2 53.2 -76.7 -33.1 14.3 10.4 28.0 62 63 A R H X S+ 0 0 173 -4,-1.6 4,-2.3 2,-0.2 -2,-0.2 0.878 110.7 49.6 -64.2 -41.1 16.4 13.6 28.4 63 64 A R H X S+ 0 0 171 -4,-1.8 4,-1.9 2,-0.2 -2,-0.2 0.932 112.1 45.6 -63.6 -49.7 14.6 14.2 31.6 64 65 A L H X S+ 0 0 30 -4,-2.0 4,-2.4 1,-0.2 -2,-0.2 0.897 114.4 49.0 -62.4 -41.0 15.2 10.6 32.9 65 66 A L H X S+ 0 0 27 -4,-2.4 4,-2.5 2,-0.2 -1,-0.2 0.879 109.6 51.5 -64.3 -41.5 18.9 10.8 31.8 66 67 A A H X S+ 0 0 53 -4,-2.3 4,-1.6 2,-0.2 -1,-0.2 0.846 109.1 52.6 -65.4 -34.5 19.3 14.2 33.5 67 68 A Y H X S+ 0 0 125 -4,-1.9 4,-2.2 2,-0.2 -2,-0.2 0.961 111.6 43.5 -65.1 -51.2 17.8 12.6 36.6 68 69 A L H X S+ 0 0 0 -4,-2.4 4,-2.9 1,-0.2 8,-0.4 0.848 109.0 58.6 -62.9 -39.3 20.3 9.7 36.6 69 70 A R H < S+ 0 0 141 -4,-2.5 -1,-0.2 1,-0.2 -2,-0.2 0.912 112.1 40.1 -57.3 -44.3 23.3 11.9 35.8 70 71 A N H < S+ 0 0 126 -4,-1.6 3,-0.2 -5,-0.2 -2,-0.2 0.867 117.8 47.4 -74.8 -37.6 22.6 14.0 39.0 71 72 A K H < S- 0 0 124 -4,-2.2 2,-0.3 1,-0.3 -2,-0.2 0.915 134.0 -5.4 -71.7 -44.3 21.8 11.0 41.2 72 73 A D X - 0 0 63 -4,-2.9 4,-2.1 -5,-0.2 -1,-0.3 -0.777 53.1-165.6-158.9 105.7 24.7 8.8 40.3 73 74 A V H > S+ 0 0 74 -2,-0.3 4,-2.4 -3,-0.2 5,-0.2 0.792 92.3 56.7 -62.7 -31.3 27.2 9.6 37.5 74 75 A A H > S+ 0 0 59 2,-0.2 4,-2.0 1,-0.2 -1,-0.2 0.966 111.8 40.5 -64.6 -54.0 28.5 6.0 37.5 75 76 A R H > S+ 0 0 88 1,-0.2 4,-1.8 2,-0.2 -2,-0.2 0.843 114.2 56.6 -63.4 -33.7 25.1 4.5 36.8 76 77 A Y H X S+ 0 0 59 -4,-2.1 4,-1.6 -8,-0.4 -2,-0.2 0.926 112.1 38.2 -63.5 -50.7 24.4 7.4 34.3 77 78 A R H X S+ 0 0 170 -4,-2.4 4,-1.8 2,-0.2 -2,-0.2 0.786 111.7 59.3 -73.6 -28.7 27.5 6.7 32.1 78 79 A E H X S+ 0 0 101 -4,-2.0 4,-1.9 -5,-0.2 -2,-0.2 0.927 111.2 40.9 -65.5 -44.2 27.2 2.9 32.4 79 80 A I H X S+ 0 0 16 -4,-1.8 4,-1.9 2,-0.2 -2,-0.2 0.847 113.2 52.6 -73.0 -35.8 23.6 3.0 30.9 80 81 A V H X>S+ 0 0 36 -4,-1.6 5,-2.2 2,-0.2 4,-0.6 0.871 112.2 48.0 -66.2 -35.4 24.5 5.7 28.2 81 82 A E H <5S+ 0 0 145 -4,-1.8 3,-0.4 3,-0.2 -2,-0.2 0.904 111.1 49.2 -71.3 -42.8 27.4 3.4 27.2 82 83 A K H <5S+ 0 0 157 -4,-1.9 -2,-0.2 1,-0.2 -1,-0.2 0.792 114.0 44.7 -69.1 -30.7 25.3 0.3 27.0 83 84 A L H <5S- 0 0 50 -4,-1.9 -1,-0.2 -5,-0.1 -2,-0.2 0.556 109.0-122.1 -91.2 -7.2 22.5 1.9 24.9 84 85 A G T <5 0 0 67 -4,-0.6 -3,-0.2 -3,-0.4 -4,-0.1 0.844 360.0 360.0 69.5 37.2 25.0 3.6 22.6 85 86 A L < 0 0 91 -5,-2.2 -4,-0.1 -6,-0.2 -5,-0.1 0.987 360.0 360.0 -80.0 360.0 23.7 7.1 23.3