==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-DEC-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 12-OCT-11 4A4E . COMPND 2 MOLECULE: SURVIVAL MOTOR NEURON PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR K.TRIPSIANES,T.MADL,M.MACHYNA,D.FESSAS,C.ENGLBRECHT,U.FISCHE . 65 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4645.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 63.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 33.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 4.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 10.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 84 A N 0 0 157 0, 0.0 2,-0.8 0, 0.0 58,-0.0 0.000 360.0 360.0 360.0 154.3 -2.1 -12.4 -3.1 2 85 A T + 0 0 84 1,-0.2 3,-0.3 3,-0.1 0, 0.0 -0.856 360.0 177.2-104.9 92.2 -5.8 -12.0 -2.2 3 86 A A S > S+ 0 0 73 -2,-0.8 3,-1.1 1,-0.2 -1,-0.2 0.861 72.8 54.8 -66.9 -38.2 -7.3 -11.0 -5.6 4 87 A A T 3 S+ 0 0 97 1,-0.3 -1,-0.2 2,-0.1 3,-0.2 0.798 115.6 37.4 -69.7 -29.6 -10.9 -10.9 -4.5 5 88 A S T > S+ 0 0 57 -3,-0.3 3,-0.9 1,-0.2 -1,-0.3 0.150 82.1 115.3-110.2 21.6 -10.3 -8.5 -1.7 6 89 A L T < S+ 0 0 35 -3,-1.1 52,-0.2 1,-0.3 -1,-0.2 0.218 75.0 49.6 -82.4 16.5 -7.8 -6.5 -3.6 7 90 A Q T 3 S+ 0 0 135 -3,-0.2 2,-0.5 1,-0.2 -1,-0.3 0.511 101.5 66.2-121.8 -16.3 -9.9 -3.4 -3.6 8 91 A Q < + 0 0 151 -3,-0.9 2,-0.3 47,-0.1 -1,-0.2 -0.927 55.8 157.9-116.6 130.1 -10.9 -3.1 0.0 9 92 A W - 0 0 29 -2,-0.5 2,-0.3 -3,-0.1 46,-0.1 -0.895 25.3-140.0-139.1 163.9 -8.5 -2.5 2.8 10 93 A K > - 0 0 131 -2,-0.3 3,-1.4 4,-0.1 2,-0.3 -0.927 34.5 -90.9-128.5 154.8 -8.8 -1.2 6.3 11 94 A V T 3 S+ 0 0 81 -2,-0.3 20,-0.2 1,-0.3 3,-0.1 -0.476 113.8 31.5 -64.2 127.1 -6.6 1.2 8.3 12 95 A G T 3 S+ 0 0 56 18,-1.6 2,-0.3 1,-0.4 -1,-0.3 0.534 89.8 126.5 100.8 9.0 -4.0 -0.8 10.3 13 96 A D < - 0 0 47 -3,-1.4 17,-3.0 17,-0.1 -1,-0.4 -0.725 57.5-125.1 -97.5 148.9 -3.8 -3.6 7.7 14 97 A K E +A 29 0A 122 -2,-0.3 2,-0.3 15,-0.2 15,-0.2 -0.687 41.8 147.0 -91.5 151.3 -0.5 -4.6 6.3 15 98 A C E -A 28 0A 2 13,-3.1 13,-2.8 -2,-0.3 47,-0.4 -0.832 43.3 -99.5-158.2-169.6 0.1 -4.7 2.6 16 99 A S E -AB 27 59A 4 43,-2.8 43,-2.8 11,-0.3 2,-0.3 -0.966 34.5-170.5-127.1 144.1 2.6 -4.2 -0.1 17 100 A A E -A 26 0A 1 9,-3.0 9,-2.8 -2,-0.4 2,-0.8 -0.919 28.5-110.6-135.2 160.1 2.9 -1.1 -2.2 18 101 A I E -A 25 0A 51 -2,-0.3 2,-0.4 7,-0.2 7,-0.2 -0.848 33.7-135.7 -93.8 109.6 4.7 0.1 -5.2 19 102 A W > - 0 0 20 5,-2.5 4,-3.0 -2,-0.8 3,-0.5 -0.538 5.4-144.9 -68.6 123.7 7.3 2.5 -4.2 20 103 A S T 4 S+ 0 0 76 -2,-0.4 -1,-0.2 1,-0.2 -2,-0.0 0.691 95.6 57.7 -63.2 -20.0 7.2 5.4 -6.6 21 104 A E T 4 S+ 0 0 143 1,-0.1 -1,-0.2 3,-0.1 -2,-0.0 0.861 124.6 15.4 -83.9 -39.5 10.9 5.8 -6.4 22 105 A D T 4 S- 0 0 70 -3,-0.5 -2,-0.2 2,-0.2 -1,-0.1 0.549 90.8-132.4-108.0 -15.4 12.0 2.3 -7.5 23 106 A G < + 0 0 46 -4,-3.0 -3,-0.2 1,-0.3 2,-0.1 0.505 67.8 126.7 76.3 1.3 8.7 1.1 -9.0 24 107 A C - 0 0 61 -5,-0.3 -5,-2.5 1,-0.1 2,-0.5 -0.436 67.8-100.5 -90.5 164.2 9.3 -2.0 -7.0 25 108 A I E +A 18 0A 101 -7,-0.2 -7,-0.2 -2,-0.1 -1,-0.1 -0.731 44.6 169.4 -89.5 129.3 7.1 -3.8 -4.5 26 109 A Y E -A 17 0A 39 -9,-2.8 -9,-3.0 -2,-0.5 2,-0.2 -0.953 39.5 -95.4-137.6 152.6 7.8 -3.2 -0.9 27 110 A P E +A 16 0A 40 0, 0.0 18,-1.8 0, 0.0 2,-0.3 -0.511 49.9 167.6 -71.0 133.3 6.0 -4.1 2.4 28 111 A A E -AC 15 44A 0 -13,-2.8 -13,-3.1 16,-0.3 2,-0.4 -0.984 27.8-136.5-145.8 153.8 3.9 -1.2 3.8 29 112 A T E -AC 14 43A 43 14,-2.8 14,-3.1 -2,-0.3 2,-0.4 -0.940 28.2-112.6-118.2 135.9 1.3 -0.8 6.4 30 113 A I E + C 0 42A 4 -17,-3.0 -18,-1.6 -2,-0.4 12,-0.3 -0.502 34.9 172.8 -68.8 120.5 -1.9 1.2 5.9 31 114 A A E - 0 0 42 10,-3.1 2,-0.3 1,-0.4 11,-0.2 0.795 66.8 -9.0 -96.7 -38.4 -1.8 4.3 8.1 32 115 A S E - C 0 41A 73 9,-1.5 9,-2.6 -22,-0.1 -1,-0.4 -0.974 61.0-146.0-159.3 152.2 -4.9 6.0 6.9 33 116 A I E - C 0 40A 26 -2,-0.3 2,-0.7 7,-0.3 7,-0.3 -0.981 6.2-158.3-128.9 136.4 -7.4 5.6 4.0 34 117 A D E >> - C 0 39A 74 5,-3.5 5,-2.0 -2,-0.4 4,-0.9 -0.931 11.7-173.9-109.3 99.5 -9.4 8.2 2.0 35 118 A F T 45S+ 0 0 131 -2,-0.7 -1,-0.1 3,-0.2 5,-0.1 0.690 78.8 63.4 -71.3 -18.5 -12.2 6.2 0.7 36 119 A K T 45S+ 0 0 186 1,-0.2 -1,-0.2 3,-0.1 -2,-0.0 0.916 114.9 30.4 -73.5 -40.6 -13.5 9.0 -1.4 37 120 A R T 45S- 0 0 193 -3,-0.3 -2,-0.2 2,-0.2 -1,-0.2 0.531 108.1-128.6 -90.8 -7.3 -10.3 9.1 -3.5 38 121 A E T <5S+ 0 0 132 -4,-0.9 17,-3.0 1,-0.3 18,-0.5 0.776 70.6 119.2 61.9 32.8 -10.0 5.3 -2.9 39 122 A T E < -CD 34 54A 13 -5,-2.0 -5,-3.5 15,-0.3 2,-0.3 -0.774 43.7-167.1-122.7 164.0 -6.5 5.9 -1.8 40 123 A C E -CD 33 53A 1 13,-3.4 13,-3.2 -7,-0.3 2,-0.5 -0.988 23.3-118.7-148.4 155.9 -4.6 5.4 1.4 41 124 A V E -CD 32 52A 28 -9,-2.6 -10,-3.1 -2,-0.3 -9,-1.5 -0.853 32.8-170.5 -97.8 130.2 -1.3 6.3 2.9 42 125 A V E -CD 30 51A 0 9,-3.3 9,-2.7 -2,-0.5 2,-0.6 -0.912 17.5-135.9-123.3 147.2 0.9 3.4 3.7 43 126 A V E -CD 29 50A 54 -14,-3.1 -14,-2.8 -2,-0.4 2,-0.6 -0.920 23.9-124.3-104.7 122.6 4.1 3.3 5.6 44 127 A Y E >> -C 28 0A 1 5,-2.9 4,-3.1 -2,-0.6 3,-1.5 -0.561 29.7-127.8 -70.3 115.0 6.9 1.3 4.2 45 128 A T T 34 S+ 0 0 66 -18,-1.8 -1,-0.1 -2,-0.6 4,-0.0 -0.372 89.0 17.1 -67.8 131.8 7.9 -1.1 6.8 46 129 A G T 34 S+ 0 0 80 1,-0.1 -1,-0.3 -2,-0.1 -18,-0.1 0.217 127.2 54.4 93.1 -15.4 11.6 -1.2 7.6 47 130 A Y T <4 S- 0 0 115 -3,-1.5 -2,-0.2 2,-0.1 -1,-0.1 0.740 91.0-135.4-116.7 -47.9 12.1 2.1 6.0 48 131 A G < + 0 0 57 -4,-3.1 2,-0.2 1,-0.3 -3,-0.1 0.629 55.3 130.6 98.3 14.4 9.7 4.5 7.6 49 132 A N - 0 0 80 -5,-0.5 -5,-2.9 -4,-0.0 2,-0.4 -0.648 43.1-147.3 -94.6 162.6 8.5 6.4 4.6 50 133 A R E +D 43 0A 177 -7,-0.3 2,-0.3 -2,-0.2 -7,-0.3 -0.990 18.0 175.0-133.8 136.4 4.9 6.9 3.9 51 134 A E E -D 42 0A 38 -9,-2.7 -9,-3.3 -2,-0.4 2,-0.6 -0.968 30.4-118.4-142.0 151.8 3.3 7.1 0.5 52 135 A E E +D 41 0A 123 -2,-0.3 2,-0.3 -11,-0.3 -11,-0.3 -0.853 39.2 169.0-101.8 120.5 -0.2 7.4 -0.8 53 136 A Q E -D 40 0A 12 -13,-3.2 -13,-3.4 -2,-0.6 2,-0.3 -0.781 37.3 -97.9-125.7 163.5 -1.4 4.5 -2.9 54 137 A N E >> -D 39 0A 83 -2,-0.3 3,-1.2 -15,-0.3 4,-0.9 -0.656 23.7-131.2 -85.9 143.3 -4.7 3.4 -4.3 55 138 A L G >4 S+ 0 0 10 -17,-3.0 3,-0.6 -2,-0.3 -16,-0.1 0.890 113.1 47.2 -58.6 -39.8 -6.6 0.8 -2.5 56 139 A S G 34 S+ 0 0 74 -18,-0.5 -1,-0.3 1,-0.2 -48,-0.1 0.547 112.0 52.2 -80.9 -5.5 -7.1 -1.1 -5.7 57 140 A D G <4 S+ 0 0 76 -3,-1.2 -1,-0.2 -50,-0.1 -2,-0.2 0.493 87.7 105.7-107.0 -8.5 -3.4 -0.6 -6.5 58 141 A L << - 0 0 1 -4,-0.9 2,-0.3 -3,-0.6 -41,-0.2 -0.226 61.3-141.4 -66.6 162.6 -2.2 -2.0 -3.1 59 142 A L B -B 16 0A 50 -43,-2.8 -43,-2.8 1,-0.0 3,-0.1 -0.874 26.5 -83.4-128.5 159.9 -0.8 -5.4 -3.0 60 143 A S - 0 0 20 -2,-0.3 -45,-0.2 -45,-0.2 -1,-0.0 -0.293 55.2 -94.9 -67.4 144.4 -1.1 -8.3 -0.6 61 144 A P - 0 0 58 0, 0.0 2,-0.3 0, 0.0 -45,-0.2 -0.175 40.0-110.1 -60.7 150.4 1.2 -8.2 2.5 62 145 A I + 0 0 78 -47,-0.4 -47,-0.0 1,-0.1 -48,-0.0 -0.611 39.4 165.6 -85.4 140.8 4.5 -10.1 2.5 63 146 A C 0 0 135 -2,-0.3 -1,-0.1 1,-0.1 0, 0.0 0.191 360.0 360.0-135.1 6.5 4.8 -13.1 4.6 64 147 A E 0 0 247 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 -0.864 360.0 360.0-123.2 360.0 7.9 -14.5 3.0 65 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 66 1148 A X 0 0 155 0, 0.0 -44,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 16.4 3.0 -2.4