==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER LIM DOMAIN CONTAINING PROTEINS 15-MAR-98 1A7I . COMPND 2 MOLECULE: QCRP2 (LIM1); . SOURCE 2 ORGANISM_SCIENTIFIC: COTURNIX JAPONICA; . AUTHOR G.KONTAXIS,R.KONRAT,B.KRAEUTLER,R.WEISKIRCHEN,K.BISTER . 60 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4341.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 27 45.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 14 23.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 3 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 5.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 8 A N 0 0 163 0, 0.0 9,-1.4 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 -80.8 -1.1 -12.5 7.5 2 9 A K B -A 9 0A 162 7,-0.2 20,-0.4 4,-0.0 7,-0.1 -0.936 360.0-129.0-131.0 140.0 0.2 -9.1 8.7 3 10 A C - 0 0 13 5,-0.8 20,-0.2 -2,-0.4 25,-0.1 -0.272 18.7-125.7 -77.3 159.8 -0.1 -5.6 7.3 4 11 A G S S+ 0 0 42 18,-0.2 19,-0.1 -2,-0.1 -1,-0.1 0.708 106.8 37.9 -81.9 -24.2 2.8 -3.1 6.8 5 12 A A S S+ 0 0 51 22,-0.3 23,-0.1 3,-0.0 18,-0.0 0.914 136.2 4.2 -89.7 -80.7 1.1 -0.4 8.8 6 13 A C S S- 0 0 76 21,-0.2 -4,-0.0 1,-0.0 3,-0.0 0.986 77.3-136.7 -64.4 -84.0 -0.7 -2.0 11.7 7 14 A G + 0 0 29 -6,-0.1 -3,-0.1 1,-0.0 3,-0.0 0.372 55.9 137.4 119.8 16.3 0.2 -5.7 11.6 8 15 A R - 0 0 195 1,-0.1 2,-0.9 -6,-0.1 -5,-0.8 -0.004 68.1 -59.0 -70.8-171.7 -3.4 -6.7 12.4 9 16 A T B +A 2 0A 98 -7,-0.1 2,-0.3 -3,-0.0 -7,-0.2 -0.688 49.3 176.5 -92.7 105.9 -5.0 -9.6 10.4 10 17 A V + 0 0 2 -9,-1.4 5,-0.2 -2,-0.9 14,-0.1 -0.744 25.6 139.5 -88.1 140.8 -5.2 -9.3 6.6 11 18 A Y S S- 0 0 194 -2,-0.3 -1,-0.1 -9,-0.0 -9,-0.0 0.290 70.6 -45.5-149.7 -76.9 -6.6 -12.6 5.4 12 19 A H S > S+ 0 0 150 4,-0.0 3,-0.7 0, 0.0 -2,-0.0 0.474 129.8 32.5-138.4 -61.7 -9.2 -12.7 2.6 13 20 A A T 3 S+ 0 0 53 1,-0.2 2,-0.4 3,-0.0 -3,-0.1 0.948 121.4 45.8 -71.2 -53.6 -11.9 -10.1 3.1 14 21 A E T 3 S+ 0 0 70 -5,-0.2 11,-0.9 10,-0.1 2,-0.3 -0.164 104.0 78.0 -91.0 40.5 -9.8 -7.4 4.9 15 22 A E E < -B 24 0B 42 -3,-0.7 2,-0.4 -2,-0.4 9,-0.2 -0.983 51.8-165.2-144.9 155.2 -6.9 -7.5 2.4 16 23 A V E -B 23 0B 50 7,-1.4 7,-1.4 -2,-0.3 2,-0.3 -0.977 33.9-119.0-132.3 138.6 -6.0 -6.3 -1.0 17 24 A Q E +B 22 0B 154 -2,-0.4 2,-0.3 5,-0.2 5,-0.2 -0.646 32.1 176.3 -89.0 134.5 -3.0 -7.9 -2.6 18 25 A C E > -B 21 0B 8 3,-2.0 3,-1.0 -2,-0.3 2,-0.5 -0.787 59.7 -66.6-142.4 87.5 -0.2 -5.5 -3.4 19 26 A D T 3 S- 0 0 113 -2,-0.3 28,-0.0 1,-0.2 29,-0.0 -0.543 114.8 -10.5 69.8-112.4 2.8 -7.4 -4.8 20 27 A G T 3 S+ 0 0 71 -2,-0.5 -1,-0.2 -3,-0.1 2,-0.1 0.824 133.4 39.4 -91.0 -37.7 4.4 -9.7 -2.1 21 28 A R E < S-B 18 0B 77 -3,-1.0 -3,-2.0 -20,-0.0 2,-0.3 -0.348 70.6-142.0 -99.7-178.9 2.5 -8.4 0.9 22 29 A S E -B 17 0B 26 -20,-0.4 2,-0.3 -5,-0.2 -18,-0.2 -0.867 12.0-152.7-129.9 166.2 -1.1 -7.3 1.4 23 30 A F E -B 16 0B 2 -7,-1.4 -7,-1.4 -2,-0.3 5,-0.2 -0.891 37.4 -75.0-129.3 169.3 -2.3 -4.5 3.5 24 31 A H E -B 15 0B 15 3,-0.9 -9,-0.2 -2,-0.3 -14,-0.1 -0.341 40.0-117.8 -67.9 145.2 -5.5 -4.1 5.2 25 32 A R S S+ 0 0 126 -11,-0.9 3,-0.2 1,-0.2 -1,-0.1 0.842 112.7 20.1 -43.3 -52.0 -8.5 -3.2 3.2 26 33 A C S S+ 0 0 112 1,-0.2 2,-1.8 -12,-0.1 -1,-0.2 0.872 121.5 59.8 -88.4 -46.1 -9.1 0.2 4.9 27 34 A C S S+ 0 0 47 9,-0.1 -3,-0.9 2,-0.0 2,-0.4 -0.636 77.0 147.2 -89.4 77.1 -5.6 0.6 6.4 28 35 A F E +C 37 0C 6 -2,-1.8 9,-1.5 9,-0.8 2,-0.3 -0.961 22.8 169.7-123.0 128.7 -4.1 0.6 2.9 29 36 A L E -C 36 0C 11 -2,-0.4 2,-0.3 7,-0.2 7,-0.1 -0.902 42.2 -96.2-143.7 168.0 -1.0 2.7 2.4 30 37 A C - 0 0 0 5,-0.8 20,-0.2 -2,-0.3 7,-0.0 -0.691 28.7-147.8 -74.0 132.4 2.0 3.9 0.5 31 38 A M S S+ 0 0 69 18,-1.3 19,-0.2 -2,-0.3 -1,-0.1 0.625 93.8 45.6 -81.1 -11.9 5.1 2.0 1.7 32 39 A V S S+ 0 0 70 17,-0.8 18,-0.1 3,-0.0 -1,-0.0 0.899 133.2 1.5 -89.9 -83.7 7.1 5.2 1.0 33 40 A C S S- 0 0 70 2,-0.0 -2,-0.1 -4,-0.0 17,-0.1 0.879 89.6-130.0 -77.0 -43.3 5.4 8.3 2.2 34 41 A R + 0 0 111 1,-0.1 2,-0.2 0, 0.0 -3,-0.1 0.896 37.2 172.6 87.6 59.8 2.3 6.7 3.8 35 42 A K - 0 0 68 1,-0.1 2,-1.3 0, 0.0 -5,-0.8 -0.525 51.4 -87.3 -84.6 164.0 -0.6 8.7 2.3 36 43 A N E +C 29 0C 149 -2,-0.2 -7,-0.2 -7,-0.1 2,-0.2 -0.618 62.3 176.9 -76.1 95.6 -4.2 7.4 3.1 37 44 A L E +C 28 0C 4 -9,-1.5 -9,-0.8 -2,-1.3 2,-0.2 -0.474 9.8 146.6-100.1 166.6 -4.5 5.0 0.2 38 45 A D - 0 0 74 3,-0.3 2,-0.3 -2,-0.2 3,-0.1 -0.683 67.1 -30.8-167.4-145.2 -7.4 2.7 -0.4 39 46 A S S S+ 0 0 98 -2,-0.2 3,-0.1 1,-0.1 -13,-0.0 -0.309 103.7 98.6 -95.2 47.1 -9.3 1.2 -3.4 40 47 A T S S- 0 0 58 1,-0.5 2,-0.2 -2,-0.3 -1,-0.1 0.840 104.0 -64.5 -84.4 -83.6 -8.5 4.3 -5.5 41 48 A T - 0 0 83 -3,-0.1 -1,-0.5 2,-0.0 -3,-0.3 -0.262 52.0-153.9-130.3-135.0 -5.6 2.7 -7.4 42 49 A V - 0 0 55 9,-0.2 2,-0.3 -2,-0.2 9,-0.2 -0.725 8.6-154.6 162.6 160.3 -2.3 1.5 -6.0 43 50 A A E -D 50 0D 16 7,-1.2 7,-0.9 -2,-0.2 2,-0.4 -0.972 6.6-148.1-150.1 163.6 1.1 1.2 -7.7 44 51 A I E +D 49 0D 70 -2,-0.3 2,-0.3 5,-0.2 5,-0.2 -0.968 13.6 177.0-126.9 144.8 4.3 -0.8 -7.3 45 52 A H E > -D 48 0D 71 3,-2.1 3,-1.4 -2,-0.4 2,-0.3 -0.826 61.6 -49.3-150.1 113.8 7.7 0.4 -8.2 46 53 A D T 3 S- 0 0 138 -2,-0.3 0, 0.0 1,-0.2 0, 0.0 -0.475 119.1 -15.7 67.0-119.8 10.7 -1.8 -7.5 47 54 A A T 3 S+ 0 0 58 -2,-0.3 2,-0.3 -3,-0.1 -1,-0.2 0.550 125.8 54.6 -95.2 -12.3 10.7 -3.2 -4.0 48 55 A E E < S-D 45 0D 61 -3,-1.4 -3,-2.1 -29,-0.0 2,-0.4 -0.803 81.1-105.2-130.5 164.2 8.2 -0.9 -2.4 49 56 A V E -D 44 0D 0 -2,-0.3 -18,-1.3 -5,-0.2 -17,-0.8 -0.724 25.5-162.7 -89.7 131.7 4.6 0.4 -2.8 50 57 A Y E -D 43 0D 34 -7,-0.9 -7,-1.2 -2,-0.4 -21,-0.0 -0.876 17.2-138.1-108.3 150.7 4.1 3.8 -4.1 51 58 A C - 0 0 0 -2,-0.4 -9,-0.2 -9,-0.2 4,-0.2 0.309 35.0 -79.6 -88.1-148.9 0.6 5.3 -3.5 52 59 A K S > S+ 0 0 107 -11,-0.1 4,-1.4 3,-0.1 5,-0.1 0.914 123.8 40.0 -81.2 -50.7 -1.6 7.3 -5.8 53 60 A S H > S+ 0 0 62 1,-0.2 4,-0.9 2,-0.2 5,-0.2 0.963 117.5 41.5 -67.7 -61.2 0.1 10.6 -5.3 54 61 A C H > S+ 0 0 34 1,-0.2 4,-1.3 2,-0.2 5,-0.3 0.648 112.5 56.2 -72.1 -16.2 3.9 9.8 -5.2 55 62 A Y H > S+ 0 0 92 -4,-0.2 4,-1.6 2,-0.2 5,-0.4 0.935 112.7 39.1 -75.4 -48.6 3.6 7.3 -8.1 56 63 A G H < S+ 0 0 26 -4,-1.4 -2,-0.2 3,-0.2 -1,-0.2 0.546 122.2 42.7 -79.6 -10.4 2.1 9.8 -10.6 57 64 A K H < S+ 0 0 173 -4,-0.9 -1,-0.2 2,-0.1 -3,-0.2 0.739 115.8 44.0-108.2 -33.4 4.2 12.8 -9.4 58 65 A K H < S+ 0 0 156 -4,-1.3 -2,-0.2 -5,-0.2 -3,-0.2 0.923 134.0 20.5 -73.6 -46.6 7.7 11.2 -9.1 59 66 A Y < 0 0 93 -4,-1.6 -3,-0.2 -5,-0.3 -2,-0.1 0.638 360.0 360.0-102.0 -19.1 7.4 9.2 -12.3 60 67 A G 0 0 83 -5,-0.4 -1,-0.2 0, 0.0 -2,-0.1 -0.352 360.0 360.0 94.4 360.0 4.6 11.2 -14.1