==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HISTONE 18-MAR-98 1A7W . COMPND 2 MOLECULE: HISTONE HMFB; . SOURCE 2 ORGANISM_SCIENTIFIC: METHANOTHERMUS FERVIDUS; . AUTHOR K.DECANNIERE,K.SANDMAN,J.N.REEVE,U.HEINEMANN . 68 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5461.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 75.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 10.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 41 60.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 125 0, 0.0 29,-0.0 0, 0.0 28,-0.0 0.000 360.0 360.0 360.0 127.6 -7.7 6.3 2.9 2 2 A E + 0 0 161 2,-0.1 0, 0.0 1,-0.0 0, 0.0 0.891 360.0 81.9 -88.0 -44.4 -4.1 6.1 1.9 3 3 A L S S- 0 0 61 26,-0.2 2,-0.1 1,-0.1 30,-0.1 -0.509 77.2-128.4 -69.2 133.7 -3.3 2.4 2.5 4 4 A P > - 0 0 84 0, 0.0 4,-0.7 0, 0.0 -1,-0.1 -0.450 12.2-137.4 -72.0 148.1 -4.2 -0.1 -0.2 5 5 A I H > S+ 0 0 37 1,-0.2 4,-2.0 2,-0.2 3,-0.3 0.819 89.6 68.6 -74.9 -37.3 -6.2 -3.1 1.0 6 6 A A H > S+ 0 0 46 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.911 98.8 47.8 -53.7 -54.9 -4.5 -5.9 -1.0 7 7 A P H > S+ 0 0 49 0, 0.0 4,-2.0 0, 0.0 -1,-0.2 0.844 109.9 54.9 -55.1 -36.0 -1.2 -5.8 0.8 8 8 A I H X S+ 0 0 11 -4,-0.7 4,-1.7 -3,-0.3 -2,-0.2 0.909 106.4 51.9 -66.6 -35.3 -3.1 -5.8 4.2 9 9 A G H X S+ 0 0 8 -4,-2.0 4,-2.3 1,-0.2 -1,-0.2 0.931 107.7 52.0 -65.6 -38.5 -4.9 -9.0 3.1 10 10 A R H X S+ 0 0 148 -4,-2.1 4,-3.7 1,-0.2 5,-0.2 0.898 104.7 55.9 -66.3 -38.5 -1.5 -10.6 2.3 11 11 A I H X S+ 0 0 89 -4,-2.0 4,-1.7 2,-0.2 -1,-0.2 0.925 109.3 46.2 -54.4 -48.9 -0.2 -9.8 5.8 12 12 A I H <>S+ 0 0 37 -4,-1.7 5,-1.5 2,-0.2 4,-0.3 0.927 115.5 46.0 -68.2 -37.7 -3.1 -11.6 7.4 13 13 A K H ><5S+ 0 0 109 -4,-2.3 3,-2.2 1,-0.2 -2,-0.2 0.958 110.7 54.1 -66.1 -44.4 -2.7 -14.6 5.0 14 14 A D H 3<5S+ 0 0 141 -4,-3.7 -1,-0.2 1,-0.3 -2,-0.2 0.813 101.0 59.3 -55.9 -36.7 1.1 -14.5 5.6 15 15 A A T 3<5S- 0 0 90 -4,-1.7 -1,-0.3 -5,-0.2 -2,-0.2 0.609 131.8 -88.8 -72.1 -9.4 0.4 -14.8 9.4 16 16 A G T < 5S+ 0 0 62 -3,-2.2 -3,-0.2 -4,-0.3 2,-0.2 0.559 72.2 149.8 119.3 11.1 -1.4 -18.1 8.8 17 17 A A < - 0 0 33 -5,-1.5 -1,-0.3 1,-0.1 3,-0.1 -0.515 33.9-155.5 -78.3 141.7 -5.1 -17.4 8.1 18 18 A E S S+ 0 0 162 1,-0.3 2,-0.3 -2,-0.2 -1,-0.1 0.830 80.8 5.7 -80.1 -41.8 -6.9 -19.9 5.8 19 19 A R - 0 0 219 2,-0.0 2,-0.4 -6,-0.0 -1,-0.3 -0.981 66.3-160.2-143.8 145.6 -9.6 -17.5 4.6 20 20 A V - 0 0 38 -2,-0.3 2,-0.0 -3,-0.1 -7,-0.0 -0.997 18.0-130.8-129.0 126.9 -10.0 -13.7 5.3 21 21 A S > - 0 0 75 -2,-0.4 4,-1.5 1,-0.1 3,-0.4 -0.348 22.9-120.4 -72.4 156.3 -13.3 -11.8 5.0 22 22 A D H > S+ 0 0 103 1,-0.2 4,-2.2 2,-0.2 3,-0.3 0.912 115.7 57.1 -63.8 -37.4 -13.2 -8.6 3.0 23 23 A D H > S+ 0 0 123 1,-0.3 4,-2.2 2,-0.2 -1,-0.2 0.823 102.5 54.6 -63.1 -31.0 -14.5 -6.8 6.2 24 24 A A H > S+ 0 0 38 -3,-0.4 4,-2.2 2,-0.2 -1,-0.3 0.864 108.5 48.6 -66.5 -47.1 -11.4 -8.1 8.2 25 25 A R H X S+ 0 0 75 -4,-1.5 4,-2.1 -3,-0.3 -2,-0.2 0.886 113.4 46.5 -58.8 -45.4 -9.0 -6.7 5.6 26 26 A I H X S+ 0 0 56 -4,-2.2 4,-2.4 1,-0.2 5,-0.2 0.933 110.8 52.5 -66.2 -38.4 -10.7 -3.3 5.6 27 27 A T H X S+ 0 0 79 -4,-2.2 4,-2.1 1,-0.2 -2,-0.2 0.903 111.6 45.6 -64.6 -47.3 -10.8 -3.1 9.4 28 28 A L H X S+ 0 0 51 -4,-2.2 4,-2.6 2,-0.2 5,-0.2 0.893 110.6 53.6 -67.9 -36.0 -7.1 -3.8 9.8 29 29 A A H X S+ 0 0 0 -4,-2.1 4,-2.4 -5,-0.2 -2,-0.2 0.950 110.6 47.2 -60.2 -40.6 -6.2 -1.3 7.1 30 30 A K H X S+ 0 0 121 -4,-2.4 4,-2.0 1,-0.2 5,-0.2 0.895 111.4 50.6 -70.2 -33.4 -8.2 1.4 8.9 31 31 A I H X S+ 0 0 94 -4,-2.1 4,-2.5 -5,-0.2 -1,-0.2 0.942 112.9 45.4 -68.2 -40.1 -6.6 0.6 12.3 32 32 A L H X S+ 0 0 73 -4,-2.6 4,-2.2 1,-0.2 -2,-0.2 0.877 111.2 53.4 -72.3 -30.6 -3.1 0.7 10.9 33 33 A E H X S+ 0 0 14 -4,-2.4 4,-2.4 -5,-0.2 -1,-0.2 0.884 110.0 47.0 -66.2 -42.3 -3.8 3.9 9.0 34 34 A E H X S+ 0 0 99 -4,-2.0 4,-2.3 1,-0.2 5,-0.2 0.902 112.6 50.3 -67.6 -39.3 -5.1 5.6 12.3 35 35 A M H X S+ 0 0 66 -4,-2.5 4,-2.4 -5,-0.2 5,-0.2 0.909 109.0 51.9 -63.0 -43.0 -2.0 4.3 14.1 36 36 A G H X S+ 0 0 38 -4,-2.2 4,-2.5 1,-0.2 -2,-0.2 0.896 110.8 48.6 -60.9 -43.5 0.2 5.7 11.3 37 37 A R H X S+ 0 0 128 -4,-2.4 4,-2.5 2,-0.2 -1,-0.2 0.886 111.2 47.1 -66.0 -39.6 -1.4 9.1 11.7 38 38 A D H X S+ 0 0 55 -4,-2.3 4,-2.0 2,-0.2 -2,-0.2 0.869 114.7 47.6 -68.7 -40.8 -1.2 9.3 15.5 39 39 A I H X S+ 0 0 29 -4,-2.4 4,-2.5 -5,-0.2 -1,-0.2 0.922 113.0 49.1 -62.0 -47.5 2.5 8.2 15.3 40 40 A A H X S+ 0 0 40 -4,-2.5 4,-2.2 -5,-0.2 -2,-0.2 0.927 108.9 52.7 -59.8 -41.5 3.2 10.7 12.6 41 41 A S H X S+ 0 0 56 -4,-2.5 4,-1.6 1,-0.2 -1,-0.2 0.909 112.3 44.2 -61.7 -41.4 1.5 13.5 14.5 42 42 A E H X S+ 0 0 48 -4,-2.0 4,-1.9 1,-0.2 -1,-0.2 0.878 110.7 55.4 -69.6 -33.7 3.7 12.8 17.6 43 43 A A H X S+ 0 0 0 -4,-2.5 4,-2.5 1,-0.2 -1,-0.2 0.841 104.8 54.2 -68.7 -36.7 6.8 12.5 15.4 44 44 A I H X S+ 0 0 80 -4,-2.2 4,-2.2 2,-0.2 -1,-0.2 0.898 107.0 49.5 -61.8 -44.9 6.1 16.0 14.0 45 45 A K H X S+ 0 0 86 -4,-1.6 4,-2.4 2,-0.2 -2,-0.2 0.909 110.1 52.3 -63.2 -36.7 5.9 17.6 17.4 46 46 A L H X S+ 0 0 55 -4,-1.9 4,-0.9 2,-0.2 -2,-0.2 0.886 109.4 48.8 -61.3 -46.6 9.3 15.9 18.4 47 47 A A H ><>S+ 0 0 1 -4,-2.5 5,-2.9 2,-0.2 3,-0.8 0.910 110.9 51.0 -61.3 -41.9 11.0 17.2 15.3 48 48 A R H ><5S+ 0 0 156 -4,-2.2 3,-1.8 1,-0.3 -2,-0.2 0.937 108.5 50.2 -65.4 -35.3 9.7 20.7 16.1 49 49 A H H 3<5S+ 0 0 154 -4,-2.4 -1,-0.3 1,-0.3 -2,-0.2 0.674 108.9 54.6 -73.9 -13.5 10.9 20.6 19.7 50 50 A A T <<5S- 0 0 58 -4,-0.9 -1,-0.3 -3,-0.8 -2,-0.2 0.245 121.2-110.5 -95.5 -0.4 14.3 19.5 18.2 51 51 A G T < 5S+ 0 0 72 -3,-1.8 2,-0.3 1,-0.2 -3,-0.2 0.679 76.1 125.6 86.1 18.1 14.3 22.6 16.0 52 52 A R < - 0 0 59 -5,-2.9 -1,-0.2 -6,-0.1 -2,-0.2 -0.858 49.9-166.2-113.3 156.3 13.8 20.8 12.7 53 53 A K S S+ 0 0 197 -2,-0.3 2,-0.5 -3,-0.1 -1,-0.1 0.593 75.1 82.6 -99.7 -25.5 11.4 20.8 9.8 54 54 A T S S- 0 0 98 -7,-0.1 2,-0.5 -6,-0.0 -2,-0.0 -0.789 76.2-137.4 -87.1 125.4 12.5 17.4 8.4 55 55 A I - 0 0 74 -2,-0.5 2,-0.2 3,-0.0 -11,-0.1 -0.753 29.2-168.8 -82.4 126.7 11.0 14.4 10.0 56 56 A K >> - 0 0 98 -2,-0.5 4,-1.4 -13,-0.2 3,-1.0 -0.674 37.2-100.7-112.9 169.3 13.6 11.8 10.5 57 57 A A H 3> S+ 0 0 70 1,-0.3 4,-2.5 -2,-0.2 3,-0.2 0.913 119.8 58.9 -57.3 -38.5 13.7 8.0 11.5 58 58 A E H 3> S+ 0 0 106 1,-0.2 4,-2.2 2,-0.2 -1,-0.3 0.835 102.4 54.0 -62.7 -32.0 14.7 8.9 15.1 59 59 A D H <> S+ 0 0 3 -3,-1.0 4,-2.3 2,-0.2 -1,-0.2 0.901 109.9 46.6 -63.4 -42.2 11.5 11.0 15.5 60 60 A I H X S+ 0 0 69 -4,-1.4 4,-2.2 -3,-0.2 -2,-0.2 0.905 112.7 50.5 -62.1 -49.0 9.3 8.0 14.4 61 61 A E H X S+ 0 0 128 -4,-2.5 4,-0.9 1,-0.2 -2,-0.2 0.917 113.6 43.8 -62.3 -35.1 11.2 5.7 16.7 62 62 A L H X S+ 0 0 74 -4,-2.2 4,-0.5 -5,-0.2 3,-0.4 0.886 112.0 53.5 -77.0 -36.9 10.8 8.0 19.7 63 63 A A H >< S+ 0 0 0 -4,-2.3 3,-1.1 1,-0.2 4,-0.3 0.880 101.1 59.3 -65.2 -36.1 7.1 8.7 18.9 64 64 A V H >< S+ 0 0 47 -4,-2.2 3,-2.2 1,-0.2 4,-0.3 0.877 92.9 69.0 -65.3 -28.7 6.2 5.0 18.7 65 65 A R H >< S+ 0 0 160 -4,-0.9 3,-0.9 -3,-0.4 -1,-0.2 0.763 89.6 61.7 -59.3 -25.0 7.3 4.5 22.4 66 66 A R T << S+ 0 0 170 -3,-1.1 -1,-0.3 -4,-0.5 -2,-0.2 0.610 107.0 46.3 -71.4 -20.2 4.4 6.7 23.6 67 67 A F T < 0 0 85 -3,-2.2 -1,-0.2 -4,-0.3 -2,-0.2 0.319 360.0 360.0-101.9 1.5 2.0 4.0 22.2 68 68 A K < 0 0 190 -3,-0.9 -3,-0.0 -4,-0.3 -4,-0.0 -0.433 360.0 360.0 -88.0 360.0 3.7 0.8 23.5