==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN TRANSPORT 01-OCT-09 3A7P . COMPND 2 MOLECULE: AUTOPHAGY PROTEIN 16; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR Y.FUJIOKA,N.N.NODA,F.INAGAKI . 164 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 12447.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 159 97.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 149 90.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 55 A G > 0 0 86 0, 0.0 4,-0.9 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -46.8 -26.3 101.6 -81.9 2 56 A N H > + 0 0 87 2,-0.2 4,-1.7 3,-0.2 5,-0.1 0.968 360.0 27.4 -73.9 -57.7 -27.7 105.1 -81.9 3 57 A I H > S+ 0 0 96 2,-0.2 4,-3.3 1,-0.2 5,-0.2 0.863 123.8 52.2 -72.1 -39.4 -24.6 107.0 -80.7 4 58 A V H > S+ 0 0 82 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.849 108.5 50.9 -66.0 -34.7 -22.3 104.4 -82.2 5 59 A S H X S+ 0 0 83 -4,-0.9 4,-1.2 2,-0.2 -1,-0.2 0.935 114.1 46.2 -67.0 -43.6 -24.0 104.7 -85.5 6 60 A H H >X S+ 0 0 98 -4,-1.7 4,-2.3 2,-0.2 3,-0.8 0.956 112.0 47.6 -62.1 -55.8 -23.5 108.4 -85.2 7 61 A D H 3X S+ 0 0 25 -4,-3.3 4,-3.4 1,-0.3 5,-0.3 0.892 108.0 56.3 -54.9 -43.0 -19.9 108.4 -84.2 8 62 A D H 3X S+ 0 0 86 -4,-2.1 4,-1.3 1,-0.2 -1,-0.3 0.828 107.7 49.8 -60.0 -30.6 -19.1 105.9 -87.0 9 63 A A H X S+ 0 0 57 -4,-3.1 4,-2.5 2,-0.2 3,-0.8 0.990 112.2 46.8 -66.6 -62.6 19.8 170.7 -149.7 76 130 A R H 3X S+ 0 0 162 -4,-2.8 4,-2.4 1,-0.3 -2,-0.2 0.820 108.4 57.1 -47.6 -40.3 23.4 171.9 -149.8 77 131 A W H 3X S+ 0 0 31 -4,-3.0 4,-2.8 2,-0.2 -1,-0.3 0.920 109.1 46.0 -60.0 -44.6 23.9 169.8 -152.9 78 132 A L H S+ 0 0 28 -2,-0.4 4,-1.2 1,-0.1 -1,-0.2 0.515 94.5 111.8 66.4 7.3 -17.6 113.5 -79.1 94 62 B D H >> S+ 0 0 96 -3,-0.2 4,-3.0 2,-0.2 3,-0.8 0.987 77.1 43.8 -72.9 -59.9 -16.4 117.1 -78.5 95 63 B A H 3> S+ 0 0 75 -4,-0.3 4,-2.6 1,-0.3 5,-0.3 0.889 113.9 54.0 -50.9 -40.6 -12.9 116.7 -79.7 96 64 B L H 3> S+ 0 0 30 1,-0.2 4,-1.6 2,-0.2 -1,-0.3 0.860 112.4 43.7 -63.7 -34.4 -14.3 114.8 -82.7 97 65 B L H X S+ 0 0 84 -4,-2.4 4,-2.6 1,-0.2 3,-0.7 0.966 116.3 49.7 -53.6 -60.0 -11.6 123.1 -88.2 103 71 B L H 3X S+ 0 0 32 -4,-2.8 4,-2.3 1,-0.3 -1,-0.2 0.864 109.9 53.0 -50.1 -37.7 -10.7 120.5 -90.9 104 72 B Q H 3X S+ 0 0 71 -4,-2.2 4,-1.4 -5,-0.3 -1,-0.3 0.882 108.8 47.8 -67.3 -37.6 -14.0 121.4 -92.6 105 73 B K H X S+ 0 0 138 -4,-1.4 4,-2.3 1,-0.2 3,-0.6 0.981 110.2 54.1 -65.7 -54.2 -13.4 125.2 -97.9 109 77 B S H 3X S+ 0 0 76 -4,-2.6 4,-1.6 1,-0.3 -2,-0.2 0.831 111.2 45.7 -45.7 -42.0 -10.5 127.6 -97.6 110 78 B K H 3X S+ 0 0 54 -4,-2.3 4,-2.4 2,-0.2 -1,-0.3 0.812 107.8 55.1 -76.5 -30.9 -8.4 125.4 -99.9 111 79 B E H X S+ 0 0 99 -4,-2.5 4,-2.9 1,-0.2 3,-0.8 0.941 110.7 54.7 -63.0 -50.6 -4.6 135.9 -116.4 124 92 B K H 3X S+ 0 0 58 -4,-3.1 4,-2.8 1,-0.3 -1,-0.2 0.901 106.8 53.7 -52.1 -41.2 -0.9 135.2 -116.6 125 93 B N H 3X S+ 0 0 57 -4,-2.4 4,-1.7 -5,-0.2 -1,-0.3 0.833 109.5 47.4 -62.0 -34.1 -1.5 133.3 -119.8 126 94 B K H < S+ 0 0 17 -4,-2.1 3,-1.8 -5,-0.2 4,-0.4 0.942 109.5 50.8 -66.7 -44.3 25.5 161.7 -152.1 160 128 B V H >< S+ 0 0 69 -4,-2.4 3,-2.2 1,-0.3 4,-0.2 0.937 101.8 62.5 -56.4 -44.9 28.7 162.9 -150.5 161 129 B A G >< S+ 0 0 52 -4,-2.5 3,-1.2 1,-0.3 4,-0.3 0.624 87.0 74.7 -55.9 -14.4 30.6 161.2 -153.3 162 130 B R G X S+ 0 0 135 -3,-1.8 3,-1.5 -4,-0.4 -1,-0.3 0.792 80.0 69.2 -71.4 -27.3 28.9 163.5 -155.8 163 131 B W G < S+ 0 0 73 -3,-2.2 -1,-0.3 -4,-0.4 -2,-0.2 0.616 86.0 73.5 -65.3 -8.9 31.2 166.4 -154.7 164 132 B L G < 0 0 155 -3,-1.2 -1,-0.3 -4,-0.2 -2,-0.2 0.801 360.0 360.0 -75.1 -28.3 33.9 164.4 -156.4 165 133 B K < 0 0 124 -3,-1.5 0, 0.0 -4,-0.3 0, 0.0 -0.385 360.0 360.0 -81.2 360.0 32.7 165.2 -159.9