==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN/RNA 12-JUL-05 2A9X . COMPND 2 MOLECULE: BIV-2 CYCLIC PEPTIDE; . SOURCE 2 SYNTHETIC: YES; . AUTHOR T.C.LEEPER,Z.ATHANASSIOU,R.L.DIAS,J.A.ROBINSON,G.VARANI . 14 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1693.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 2 14.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 14.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 1 R 0 0 93 0, 0.0 11,-3.1 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 166.3 6.0 -3.3 3.9 2 2 1 V B -A 11 0A 52 12,-0.3 9,-0.2 9,-0.3 0, 0.0 -0.922 360.0-150.9-145.8 117.1 6.0 0.3 2.7 3 3 1 R - 0 0 133 7,-2.1 8,-0.1 -2,-0.4 5,-0.1 0.541 30.4-150.5 -64.9 1.2 5.0 1.5 -0.8 4 4 1 T - 0 0 83 6,-0.3 5,-0.2 2,-0.1 -1,-0.1 0.839 22.7-124.5 26.4 71.4 7.6 4.3 -0.1 5 5 1 R - 0 0 152 1,-0.2 -1,-0.1 2,-0.1 5,-0.0 0.031 28.3 -95.2 -38.0 149.5 5.6 6.6 -2.3 6 6 1 G S S- 0 0 89 1,-0.2 -1,-0.2 3,-0.0 -2,-0.1 0.750 120.5 -1.7 -45.2 -18.2 7.8 8.1 -5.1 7 7 1 K S S+ 0 0 196 0, 0.0 -1,-0.2 0, 0.0 -2,-0.1 0.500 134.2 46.0-141.2 -43.3 8.2 10.9 -2.6 8 8 1 R S S- 0 0 177 -5,-0.1 2,-0.4 -4,-0.0 0, 0.0 -0.047 81.1-109.3 -92.1-159.0 6.1 10.3 0.5 9 9 1 R - 0 0 172 -5,-0.2 2,-0.4 -3,-0.1 -3,-0.0 -0.995 22.5-174.7-137.8 142.5 5.8 7.1 2.6 10 10 1 I - 0 0 57 -2,-0.4 -7,-2.1 2,-0.0 -6,-0.3 -0.791 11.9-159.3-139.1 95.7 2.9 4.6 3.0 11 11 1 R B +A 2 0A 188 -2,-0.4 -9,-0.3 -9,-0.2 -2,-0.0 -0.540 12.2 177.2 -75.5 137.1 3.4 1.8 5.6 12 12 1 V - 0 0 53 -11,-3.1 -1,-0.1 -2,-0.2 -10,-0.0 -0.682 60.7 -62.9-141.4 83.0 1.2 -1.3 5.1 13 13 1 P 0 0 109 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.629 360.0 360.0 77.6-122.5 2.0 -4.0 7.6 14 14 1 P 0 0 139 0, 0.0 -12,-0.3 0, 0.0 -3,-0.0 0.027 360.0 360.0 -96.2 360.0 5.6 -5.2 7.2