==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE(ENDORIBONUCLEASE) 15-SEP-92 2AAE . COMPND 2 MOLECULE: RIBONUCLEASE T1; . SOURCE 2 ORGANISM_SCIENTIFIC: ASPERGILLUS ORYZAE; . AUTHOR I.ZEGERS,P.VERHELST,C.W.CHOE,J.STEYAERT,U.HEINEMANN,L.WYNS, . 104 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5482.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 57.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 29 27.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 4.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 14.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 2 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 148 0, 0.0 2,-0.4 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 176.2 5.9 -4.6 15.2 2 2 A a - 0 0 44 1,-0.1 10,-0.2 10,-0.1 3,-0.1 -0.933 360.0-159.6-106.1 137.5 7.4 -1.6 13.5 3 3 A D S S+ 0 0 92 8,-2.3 2,-0.4 -2,-0.4 9,-0.2 0.737 90.4 18.8 -79.4 -31.0 5.9 1.8 14.0 4 4 A Y E S-A 11 0A 62 7,-2.0 7,-3.1 100,-0.1 2,-0.5 -0.999 70.2-163.1-133.8 135.8 7.6 2.9 10.8 5 5 A T E -A 10 0A 44 -2,-0.4 99,-2.4 5,-0.2 2,-0.7 -0.988 4.9-175.5-127.8 120.3 9.0 0.6 8.0 6 6 A b E > -A 9 0A 0 3,-2.4 3,-2.8 -2,-0.5 2,-0.4 -0.964 69.5 -56.8-116.2 102.3 11.5 2.0 5.5 7 7 A G T 3 S- 0 0 46 -2,-0.7 97,-0.1 1,-0.3 84,-0.0 -0.478 124.3 -19.0 62.1-114.4 12.2 -0.7 2.9 8 8 A S T 3 S+ 0 0 120 -2,-0.4 2,-0.4 -3,-0.1 -1,-0.3 0.437 115.0 108.0-104.0 5.4 13.4 -3.5 5.2 9 9 A N E < -A 6 0A 49 -3,-2.8 -3,-2.4 2,-0.0 2,-0.5 -0.655 55.2-153.1 -86.4 130.5 14.2 -1.2 8.1 10 10 A a E -A 5 0A 67 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -0.908 12.7-174.0-103.7 126.6 12.0 -1.3 11.2 11 11 A Y E -A 4 0A 3 -7,-3.1 -8,-2.3 -2,-0.5 -7,-2.0 -0.970 12.4-151.6-126.5 140.1 11.6 1.6 13.5 12 12 A S > - 0 0 34 -2,-0.4 4,-1.6 -10,-0.2 5,-0.2 -0.601 36.7-107.7 -95.6 164.3 9.8 2.1 16.8 13 13 A S H > S+ 0 0 58 -2,-0.2 4,-2.7 2,-0.2 5,-0.2 0.853 121.7 60.3 -55.7 -34.7 8.5 5.4 18.0 14 14 A S H > S+ 0 0 78 1,-0.2 4,-2.5 2,-0.2 -1,-0.2 0.939 103.6 50.5 -59.2 -47.6 11.4 5.5 20.6 15 15 A D H > S+ 0 0 53 1,-0.2 4,-1.8 2,-0.2 -1,-0.2 0.880 111.8 45.3 -59.9 -43.0 13.9 5.4 17.7 16 16 A V H X S+ 0 0 3 -4,-1.6 4,-3.1 2,-0.2 -1,-0.2 0.839 112.9 52.1 -70.8 -41.6 12.2 8.3 15.8 17 17 A S H X S+ 0 0 70 -4,-2.7 4,-2.3 1,-0.2 -2,-0.2 0.867 111.3 46.4 -55.7 -45.3 12.0 10.3 19.0 18 18 A T H X S+ 0 0 77 -4,-2.5 4,-1.5 -5,-0.2 -1,-0.2 0.946 114.6 46.4 -64.8 -48.7 15.7 9.8 19.8 19 19 A A H X S+ 0 0 6 -4,-1.8 4,-2.3 -5,-0.2 5,-0.2 0.908 112.8 50.1 -64.2 -44.9 16.8 10.7 16.2 20 20 A Q H X S+ 0 0 22 -4,-3.1 4,-2.9 1,-0.2 5,-0.3 0.919 107.5 53.7 -58.7 -46.6 14.5 13.7 16.1 21 21 A A H X S+ 0 0 60 -4,-2.3 4,-1.8 1,-0.2 -1,-0.2 0.864 111.0 47.0 -54.7 -44.0 15.9 15.0 19.5 22 22 A A H X S+ 0 0 24 -4,-1.5 4,-1.8 2,-0.2 -1,-0.2 0.913 114.3 45.9 -67.0 -42.3 19.4 14.8 18.2 23 23 A G H X S+ 0 0 0 -4,-2.3 4,-2.4 1,-0.2 -2,-0.2 0.865 111.8 51.1 -66.8 -41.3 18.6 16.5 14.9 24 24 A Y H X S+ 0 0 31 -4,-2.9 4,-2.3 -5,-0.2 -1,-0.2 0.901 108.0 52.0 -67.3 -39.9 16.7 19.3 16.5 25 25 A K H X S+ 0 0 112 -4,-1.8 4,-2.0 -5,-0.3 -1,-0.2 0.906 109.7 49.2 -62.1 -41.5 19.4 20.1 19.0 26 26 A L H X>S+ 0 0 28 -4,-1.8 5,-2.1 1,-0.2 4,-1.0 0.924 109.1 54.6 -62.0 -43.3 21.9 20.4 16.1 27 27 A H H ><5S+ 0 0 47 -4,-2.4 3,-0.6 1,-0.2 -2,-0.2 0.911 109.3 46.3 -55.5 -45.5 19.4 22.7 14.5 28 28 A E H 3<5S+ 0 0 129 -4,-2.3 -1,-0.2 1,-0.2 -2,-0.2 0.893 112.0 50.9 -64.8 -39.1 19.3 24.9 17.6 29 29 A D H 3<5S- 0 0 91 -4,-2.0 -1,-0.2 -5,-0.2 -2,-0.2 0.580 109.1-122.4 -75.2 -13.2 23.1 25.0 17.8 30 30 A G T <<5 + 0 0 74 -4,-1.0 2,-0.3 -3,-0.6 -3,-0.2 0.779 69.5 132.5 69.6 33.7 23.5 26.0 14.1 31 31 A E < - 0 0 109 -5,-2.1 2,-0.3 -6,-0.1 -1,-0.3 -0.777 39.1-167.9-119.1 161.2 25.6 22.9 13.6 32 32 A T - 0 0 62 -2,-0.3 2,-0.3 -3,-0.1 5,-0.1 -0.935 6.1-153.0-140.8 158.2 25.8 20.0 11.2 33 33 A V B > +B 38 0B 36 5,-2.1 5,-2.1 -2,-0.3 37,-0.2 -0.974 51.3 29.3-138.4 148.5 27.6 16.6 11.0 34 34 A G T > 5S- 0 0 28 -2,-0.3 3,-1.7 35,-0.3 38,-0.1 0.118 92.8 -72.9 87.1 162.0 28.8 14.4 8.1 35 35 A S T 3 5S+ 0 0 115 1,-0.3 -1,-0.2 36,-0.2 37,-0.1 0.729 132.7 49.2 -59.1 -32.3 30.0 15.1 4.7 36 36 A N T 3 5S- 0 0 93 -3,-0.1 -1,-0.3 4,-0.0 -2,-0.1 0.302 111.4-122.6 -91.6 5.2 26.5 16.0 3.5 37 37 A S T < 5 - 0 0 57 -3,-1.7 -3,-0.2 1,-0.1 -2,-0.1 0.989 34.5-133.3 56.3 76.0 25.9 18.3 6.4 38 38 A Y B + 0 0 46 -2,-0.5 3,-0.9 1,-0.2 -2,-0.0 -0.322 47.7 143.1 -86.4 59.9 8.5 18.9 -0.0 45 45 A Y T 3 + 0 0 139 -2,-1.6 -1,-0.2 1,-0.2 54,-0.0 0.636 69.7 60.5 -67.5 -24.9 8.6 18.5 -3.8 46 46 A E T 3 S- 0 0 61 -3,-0.4 -1,-0.2 2,-0.0 -2,-0.1 0.662 105.3-131.8 -76.9 -15.7 7.0 15.1 -3.5 47 47 A G < - 0 0 56 -3,-0.9 -2,-0.1 1,-0.1 -3,-0.1 0.865 33.6-177.3 69.5 36.4 4.0 16.7 -1.9 48 48 A F - 0 0 32 1,-0.1 2,-1.1 -4,-0.0 -1,-0.1 -0.457 33.4-114.3 -62.1 143.1 3.6 14.3 1.2 49 49 A D + 0 0 155 2,-0.0 2,-0.4 -2,-0.0 -1,-0.1 -0.739 45.9 168.6 -84.0 93.0 0.6 15.1 3.4 50 50 A F - 0 0 19 -2,-1.1 38,-0.1 2,-0.1 37,-0.1 -0.848 30.5-150.2-102.7 152.1 2.2 16.2 6.7 51 51 A S S S+ 0 0 130 -2,-0.4 2,-0.4 36,-0.3 -1,-0.1 0.150 76.0 82.3-105.1 20.5 -0.2 17.8 9.2 52 52 A V S S- 0 0 19 35,-0.1 2,-0.2 33,-0.0 -2,-0.1 -0.950 84.1-112.9-118.7 145.7 2.6 20.0 10.6 53 53 A S - 0 0 74 -2,-0.4 29,-0.2 1,-0.1 30,-0.2 -0.472 40.8 -84.3 -83.7 156.2 3.8 23.2 9.0 54 54 A S S S+ 0 0 73 -2,-0.2 2,-0.2 27,-0.1 -1,-0.1 -0.129 80.6 93.5 -74.4 170.2 7.1 24.0 7.3 55 55 A P - 0 0 45 0, 0.0 27,-1.4 0, 0.0 2,-0.3 0.603 66.6-168.0 -65.9 159.5 9.9 24.8 7.3 56 56 A Y E -CD 42 81C 24 -14,-0.6 -14,-2.9 25,-0.2 2,-0.3 -0.845 11.5-162.2-122.4 150.0 11.0 21.2 7.5 57 57 A Y E -CD 41 80C 32 23,-2.6 23,-2.8 -2,-0.3 2,-0.4 -0.968 9.5-143.2-135.3 139.4 14.4 19.7 8.2 58 58 A E E +CD 40 79C 19 -18,-2.7 -18,-1.6 -2,-0.3 21,-0.2 -0.871 17.9 175.9-110.5 143.4 15.7 16.2 7.5 59 59 A W E - D 0 78C 2 19,-2.1 19,-2.9 -2,-0.4 2,-0.1 -0.993 35.2-104.8-144.2 135.8 18.1 14.2 9.7 60 60 A P E - D 0 77C 0 0, 0.0 8,-0.5 0, 0.0 2,-0.5 -0.328 25.8-161.3 -66.3 141.7 19.2 10.6 9.2 61 61 A I E -ED 67 76C 8 15,-1.6 15,-0.5 12,-0.2 2,-0.4 -0.979 19.4-137.7-124.4 130.5 17.8 7.8 11.3 62 62 A L > - 0 0 31 4,-0.5 3,-1.4 -2,-0.5 12,-0.1 -0.758 14.1-136.4 -98.4 141.2 19.9 4.7 11.4 63 63 A S T 3 S+ 0 0 81 -2,-0.4 -53,-0.1 1,-0.3 -1,-0.1 0.814 104.4 63.5 -62.8 -29.8 18.8 1.1 11.2 64 64 A S T 3 S- 0 0 73 1,-0.1 -1,-0.3 2,-0.1 3,-0.1 0.712 108.2-121.3 -65.9 -27.6 21.3 0.3 14.0 65 65 A G S < S+ 0 0 42 -3,-1.4 -2,-0.1 1,-0.4 -1,-0.1 0.143 72.7 129.3 100.0 -15.2 19.5 2.5 16.5 66 66 A D - 0 0 110 1,-0.1 -4,-0.5 -5,-0.0 -1,-0.4 -0.435 68.5-109.4 -68.8 149.5 22.7 4.6 16.9 67 67 A V B -E 61 0C 61 1,-0.1 2,-0.1 -3,-0.1 -6,-0.1 -0.641 44.9 -98.8 -83.1 138.1 22.3 8.4 16.6 68 68 A Y + 0 0 7 -8,-0.5 -1,-0.1 -2,-0.4 3,-0.1 -0.272 50.2 164.9 -61.5 128.6 23.9 9.5 13.4 69 69 A S - 0 0 107 1,-0.5 -35,-0.3 -2,-0.1 2,-0.3 0.466 59.3 -61.8-125.4 1.5 27.4 10.9 14.0 70 70 A G S S+ 0 0 28 -37,-0.2 -1,-0.5 2,-0.1 2,-0.1 -0.797 93.6 77.6 136.2 179.2 29.1 11.1 10.6 71 71 A G S S- 0 0 59 -2,-0.3 -36,-0.2 -3,-0.1 -1,-0.0 -0.511 98.3 -2.5 80.6-162.4 30.0 8.4 8.1 72 72 A S - 0 0 99 1,-0.1 -2,-0.1 -2,-0.1 -38,-0.0 -0.437 56.3-159.6 -66.0 129.4 27.3 6.9 5.9 73 73 A P - 0 0 22 0, 0.0 3,-0.3 0, 0.0 -12,-0.2 0.522 25.8-148.1 -87.6 -7.7 23.8 8.3 6.5 74 74 A G - 0 0 44 1,-0.2 -12,-0.1 -14,-0.1 0, 0.0 -0.202 37.1 -67.8 71.4-164.8 21.9 5.4 4.9 75 75 A A S S+ 0 0 24 -69,-0.1 17,-2.2 -14,-0.1 2,-0.3 0.543 98.4 90.0-104.4 -6.1 18.6 6.0 3.3 76 76 A D E -DF 61 91C 2 -15,-0.5 -15,-1.6 -3,-0.3 2,-0.3 -0.773 46.7-177.9 -99.7 147.6 16.2 6.9 6.0 77 77 A R E -DF 60 90C 8 13,-3.0 13,-2.8 -2,-0.3 2,-0.4 -0.981 23.0-139.4-146.4 149.7 15.4 10.3 7.4 78 78 A V E -DF 59 89C 0 -19,-2.9 -19,-2.1 -2,-0.3 2,-0.5 -0.825 21.8-149.8-100.1 135.6 13.2 11.8 10.0 79 79 A V E +DF 58 88C 0 9,-2.9 8,-3.0 -2,-0.4 9,-1.7 -0.971 23.0 169.3-113.7 122.4 11.5 15.1 8.9 80 80 A F E -DF 57 86C 0 -23,-2.8 -23,-2.6 -2,-0.5 6,-0.2 -0.842 22.8-130.4-129.2 162.9 10.9 17.6 11.7 81 81 A N E > -D 56 0C 1 4,-1.7 3,-2.1 -2,-0.3 -25,-0.2 -0.539 38.2 -85.3-109.1 176.8 9.7 21.3 11.5 82 82 A E T 3 S+ 0 0 67 -27,-1.4 -26,-0.1 1,-0.3 -28,-0.1 0.753 126.6 53.3 -54.0 -22.1 11.0 24.5 13.1 83 83 A N T 3 S- 0 0 120 -30,-0.2 -1,-0.3 2,-0.1 3,-0.1 0.195 118.9-106.5-100.7 16.4 8.9 23.9 16.3 84 84 A N S < S+ 0 0 66 -3,-2.1 2,-0.4 1,-0.2 -2,-0.1 0.892 72.6 144.5 59.0 39.7 10.4 20.4 16.8 85 85 A Q - 0 0 89 -4,-0.2 -4,-1.7 -32,-0.1 2,-0.3 -0.908 55.3-113.0-107.2 138.1 7.1 18.7 15.7 86 86 A L E +F 80 0C 56 -2,-0.4 -6,-0.2 -6,-0.2 3,-0.1 -0.606 32.0 178.4 -76.9 129.4 7.5 15.4 13.8 87 87 A A E - 0 0 16 -8,-3.0 -36,-0.3 1,-0.4 2,-0.3 0.821 55.0 -79.5 -95.0 -42.7 6.4 15.7 10.2 88 88 A G E -F 79 0C 8 -9,-1.7 -9,-2.9 -38,-0.1 2,-0.5 -0.964 36.6 -80.6 165.7-173.8 7.3 12.1 9.3 89 89 A V E +F 78 0C 2 -2,-0.3 14,-3.0 14,-0.2 2,-0.3 -0.999 44.9 175.9-129.0 122.6 9.8 9.4 8.3 90 90 A I E -FG 77 102C 0 -13,-2.8 -13,-3.0 -2,-0.5 2,-0.3 -0.795 9.5-160.8-123.6 169.0 10.9 9.1 4.7 91 91 A T E -FG 76 101C 1 10,-2.6 10,-2.2 -2,-0.3 -15,-0.2 -0.995 31.3-146.7-151.3 152.9 13.4 7.1 2.6 92 92 A H > + 0 0 55 -17,-2.2 3,-2.1 -2,-0.3 -16,-0.1 0.657 69.4 118.3 -88.8 -14.1 15.3 7.0 -0.6 93 93 A T T 3 S+ 0 0 61 1,-0.3 -86,-0.2 -18,-0.2 -2,-0.1 -0.360 87.3 7.2 -56.4 126.5 14.9 3.1 -0.5 94 94 A G T 3 S+ 0 0 81 1,-0.2 2,-0.3 -2,-0.1 -1,-0.3 0.596 110.1 103.1 77.5 15.8 12.9 2.2 -3.6 95 95 A A S < S- 0 0 26 -3,-2.1 -1,-0.2 4,-0.2 2,-0.1 -0.965 72.5-111.8-128.1 142.2 13.0 5.7 -5.2 96 96 A S S > S- 0 0 96 -2,-0.3 3,-2.4 4,-0.1 -3,-0.0 -0.473 70.3 -40.9 -77.5 152.0 15.2 6.9 -8.1 97 97 A G T 3 S- 0 0 75 1,-0.3 -2,-0.1 -2,-0.1 0, 0.0 -0.069 128.5 -6.7 34.0-111.9 18.0 9.5 -7.5 98 98 A N T 3 S+ 0 0 58 2,-0.1 -1,-0.3 0, 0.0 -2,-0.1 0.187 101.4 116.8 -95.0 14.0 16.7 12.2 -5.1 99 99 A N < - 0 0 70 -3,-2.4 2,-0.3 -7,-0.1 -4,-0.2 -0.472 50.1-152.6 -77.3 162.9 13.1 11.2 -4.9 100 100 A F - 0 0 9 -6,-0.1 2,-0.3 -2,-0.1 -8,-0.2 -0.907 7.7-160.7-130.3 156.1 11.8 10.1 -1.5 101 101 A V E -G 91 0C 60 -10,-2.2 -10,-2.6 -2,-0.3 2,-0.2 -0.955 32.3-105.6-132.4 153.5 8.9 7.7 -0.6 102 102 A E E -G 90 0C 89 -2,-0.3 -12,-0.2 -12,-0.2 2,-0.2 -0.590 31.9-111.0 -85.8 149.0 7.3 7.7 2.8 103 103 A b 0 0 13 -14,-3.0 -14,-0.2 -2,-0.2 -97,-0.2 -0.589 360.0 360.0 -76.1 147.8 8.0 5.0 5.4 104 104 A T 0 0 140 -99,-2.4 -98,-0.1 -2,-0.2 -1,-0.1 0.539 360.0 360.0 -93.2 360.0 5.0 2.8 6.0