==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RNA BINDING PROTEIN 14-JUL-05 2AB3 . COMPND 2 MOLECULE: ZNF29; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR S.H.MISHRA,C.M.SHELLEY,M.K.DARBY,M.W.GERMANN . 29 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2918.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 20 69.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 13.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 13.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 13.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 24.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 174 0, 0.0 16,-0.4 0, 0.0 2,-0.3 0.000 360.0 360.0 360.0 148.9 -1.1 11.5 3.8 2 2 A V - 0 0 89 14,-0.2 2,-0.3 13,-0.1 13,-0.2 -0.698 360.0-174.1 -82.8 141.0 1.9 9.5 2.4 3 3 A Y E -A 14 0A 106 11,-2.5 11,-3.0 -2,-0.3 2,-0.5 -0.962 18.7-136.7-135.6 157.8 2.2 5.7 3.2 4 4 A V E -A 13 0A 87 -2,-0.3 2,-2.0 9,-0.2 9,-0.3 -0.928 1.3-156.5-120.4 109.6 4.8 3.0 2.6 5 5 A C E +A 12 0A 7 7,-0.7 7,-1.6 -2,-0.5 6,-0.8 -0.392 32.1 158.8 -77.1 58.4 3.7 -0.5 1.4 6 6 A H + 0 0 142 -2,-2.0 -1,-0.2 5,-0.3 7,-0.1 0.171 25.7 142.5 -68.9 15.0 6.9 -2.0 2.9 7 7 A F S >> S- 0 0 128 5,-0.1 3,-2.2 1,-0.1 2,-2.1 -0.255 70.1 -98.5 -66.9 155.8 5.1 -5.5 2.8 8 8 A E T 34 S+ 0 0 186 1,-0.3 -1,-0.1 2,-0.1 -2,-0.1 -0.047 121.8 42.1 -68.9 32.8 6.9 -8.8 2.0 9 9 A N T 34 S+ 0 0 126 -2,-2.1 -1,-0.3 -4,-0.2 -2,-0.1 0.164 124.8 23.0-158.9 11.1 5.6 -8.7 -1.6 10 10 A C T <4 - 0 0 41 -3,-2.2 -4,-0.2 -5,-0.1 -2,-0.1 0.411 55.8-164.8-148.2 -62.9 6.1 -5.0 -2.7 11 11 A G < + 0 0 46 -4,-1.1 -5,-0.3 -6,-0.8 2,-0.2 0.790 49.8 140.6 59.4 29.2 8.7 -2.8 -0.8 12 12 A R E -A 5 0A 146 -7,-1.6 -7,-0.7 -5,-0.1 2,-0.3 -0.562 44.4-146.0-101.3 166.9 7.0 0.3 -2.4 13 13 A S E -A 4 0A 66 -9,-0.3 2,-0.4 -2,-0.2 -9,-0.2 -0.977 8.5-164.6-132.0 141.9 6.1 3.8 -1.2 14 14 A F E -A 3 0A 39 -11,-3.0 -11,-2.5 -2,-0.3 2,-0.6 -0.953 17.5-149.1-137.6 116.6 3.1 5.9 -2.2 15 15 A N S S+ 0 0 132 -2,-0.4 2,-0.3 -13,-0.2 -13,-0.1 0.087 81.5 55.9 -72.6 25.5 2.8 9.7 -1.7 16 16 A D S > S- 0 0 59 -2,-0.6 4,-1.6 -13,-0.2 -13,-0.2 -0.953 71.7-136.9-157.3 142.1 -1.1 9.4 -1.3 17 17 A R H > S+ 0 0 137 -16,-0.4 4,-3.4 -2,-0.3 5,-0.3 0.881 109.1 56.7 -60.0 -42.6 -3.6 7.5 0.8 18 18 A R H > S+ 0 0 153 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.901 107.0 49.2 -61.6 -38.7 -5.7 6.8 -2.4 19 19 A K H > S+ 0 0 124 2,-0.2 4,-0.7 1,-0.2 -1,-0.2 0.817 116.7 41.4 -71.5 -31.6 -2.6 5.2 -4.0 20 20 A L H X S+ 0 0 29 -4,-1.6 4,-3.4 2,-0.2 3,-0.4 0.937 115.0 50.3 -77.3 -45.2 -2.0 3.0 -0.9 21 21 A N H X S+ 0 0 89 -4,-3.4 4,-0.9 1,-0.3 -2,-0.2 0.910 113.2 45.9 -58.7 -44.9 -5.7 2.2 -0.3 22 22 A R H < S+ 0 0 173 -4,-2.4 4,-0.3 -5,-0.3 -1,-0.3 0.780 118.0 44.3 -68.3 -27.7 -6.2 1.1 -4.0 23 23 A H H >< S+ 0 0 33 -4,-0.7 3,-1.5 -3,-0.4 -2,-0.2 0.862 100.0 66.8 -85.5 -38.8 -3.0 -0.9 -3.9 24 24 A K H >< S+ 0 0 75 -4,-3.4 3,-1.7 1,-0.3 -2,-0.2 0.757 88.8 69.5 -54.4 -29.4 -3.6 -2.6 -0.4 25 25 A K G >X S+ 0 0 153 -4,-0.9 4,-2.8 1,-0.3 3,-2.5 0.913 90.8 60.4 -51.4 -42.9 -6.6 -4.4 -2.1 26 26 A I G <4 S+ 0 0 111 -3,-1.5 -1,-0.3 -4,-0.3 -2,-0.2 0.398 105.1 49.4 -69.1 -1.2 -3.9 -6.4 -4.1 27 27 A H G <4 S+ 0 0 37 -3,-1.7 -1,-0.3 -4,-0.2 -2,-0.2 0.173 113.8 43.8-120.0 9.7 -2.6 -7.6 -0.7 28 28 A T T <4 0 0 120 -3,-2.5 -2,-0.2 1,-0.2 -3,-0.1 0.539 360.0 360.0-118.1 -29.5 -6.1 -8.7 0.6 29 29 A G < 0 0 110 -4,-2.8 -1,-0.2 -5,-0.1 -2,-0.2 -0.770 360.0 360.0-163.8 360.0 -7.1 -10.4 -2.8