==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 15-JUL-05 2ABO . COMPND 2 MOLECULE: BCL-2 HOMOLOG; . SOURCE 2 ORGANISM_SCIENTIFIC: MURID HERPESVIRUS 4; . AUTHOR J.LOH,Q.HUANG,A.M.PETROS,D.NETTESHEIM,L.F.VAN DYK,L.LABRADA, . 131 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8124.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 93 71.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 21 16.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 60 45.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 6 A S 0 0 154 0, 0.0 2,-0.7 0, 0.0 124,-0.0 0.000 360.0 360.0 360.0 163.6 135.8 155.3 -60.2 2 7 A G > + 0 0 31 1,-0.2 3,-0.7 120,-0.1 122,-0.1 -0.859 360.0 13.4 104.6-106.5 137.0 158.8 -59.7 3 8 A T T >> S+ 0 0 99 -2,-0.7 3,-3.1 1,-0.2 4,-0.9 0.501 99.9 97.9 -85.1 -4.3 135.5 160.6 -56.7 4 9 A Y H 3> S+ 0 0 88 1,-0.3 4,-1.2 2,-0.2 -1,-0.2 0.800 79.3 59.6 -52.4 -28.1 134.2 157.2 -55.4 5 10 A W H <> S+ 0 0 7 -3,-0.7 4,-1.8 2,-0.2 -1,-0.3 0.646 93.8 67.7 -75.6 -15.1 137.4 157.2 -53.2 6 11 A A H <> S+ 0 0 15 -3,-3.1 4,-2.4 2,-0.2 5,-0.3 0.989 101.9 41.0 -67.6 -61.0 136.2 160.5 -51.6 7 12 A T H X S+ 0 0 64 -4,-0.9 4,-1.1 1,-0.3 -2,-0.2 0.883 122.2 44.0 -53.9 -40.2 133.2 159.1 -49.8 8 13 A L H X S+ 0 0 0 -4,-1.2 4,-1.3 -5,-0.2 -1,-0.3 0.798 107.8 60.4 -74.8 -29.6 135.3 156.1 -48.9 9 14 A I H X S+ 0 0 0 -4,-1.8 4,-1.1 1,-0.2 -2,-0.2 0.913 105.9 45.7 -64.1 -43.6 138.3 158.4 -48.0 10 15 A T H X S+ 0 0 16 -4,-2.4 4,-3.7 2,-0.2 5,-0.4 0.816 101.0 71.7 -69.2 -30.0 136.3 160.2 -45.3 11 16 A A H X S+ 0 0 1 -4,-1.1 4,-4.1 -5,-0.3 5,-0.3 0.962 104.0 36.9 -48.4 -64.9 135.1 156.8 -44.0 12 17 A F H X S+ 0 0 0 -4,-1.3 4,-0.9 1,-0.2 -1,-0.3 0.816 116.3 59.6 -57.4 -30.0 138.5 155.8 -42.6 13 18 A L H X S+ 0 0 0 -4,-1.1 4,-0.6 -5,-0.2 -2,-0.2 0.938 118.5 25.0 -64.4 -50.8 138.8 159.5 -41.7 14 19 A K H >< S+ 0 0 41 -4,-3.7 3,-0.6 2,-0.2 4,-0.4 0.872 113.7 66.5 -82.2 -41.1 135.7 159.6 -39.5 15 20 A T H 3< S+ 0 0 58 -4,-4.1 3,-0.2 -5,-0.4 -3,-0.2 0.752 108.1 42.9 -52.0 -25.3 135.7 155.9 -38.6 16 21 A V H 3< S+ 0 0 15 -4,-0.9 -1,-0.3 -5,-0.3 -2,-0.2 0.719 111.3 52.9 -93.3 -25.5 138.9 156.6 -36.8 17 22 A S S << S- 0 0 0 -3,-0.6 84,-1.9 -4,-0.6 85,-0.6 0.185 111.4-119.6 -94.5 16.5 137.7 159.8 -35.1 18 23 A K + 0 0 154 -4,-0.4 83,-0.9 -3,-0.2 -3,-0.2 0.920 44.1 171.9 42.3 92.4 134.6 158.1 -33.8 19 24 A V - 0 0 39 -5,-0.2 -1,-0.2 82,-0.1 -4,-0.1 -0.468 65.1 -84.7-127.2 59.7 131.7 159.9 -35.3 20 25 A E S S- 0 0 171 1,-0.1 -5,-0.1 2,-0.1 -2,-0.0 0.755 92.6 -58.8 45.2 26.6 128.7 157.9 -34.4 21 26 A E - 0 0 155 -7,-0.2 -1,-0.1 1,-0.1 -6,-0.1 0.929 68.1-101.1 68.6 96.3 129.6 155.8 -37.4 22 27 A L - 0 0 22 -11,-0.2 2,-0.6 1,-0.1 3,-0.1 -0.217 29.8-155.1 -48.5 120.7 129.6 157.9 -40.6 23 28 A D S S+ 0 0 150 1,-0.2 -1,-0.1 -12,-0.0 -2,-0.0 -0.374 70.8 86.4 -98.4 53.8 126.3 157.2 -42.4 24 29 A C + 0 0 87 -2,-0.6 2,-0.3 -17,-0.1 -1,-0.2 -0.307 64.9 92.6-147.8 55.7 127.6 158.2 -45.9 25 30 A V S S- 0 0 35 -3,-0.1 5,-0.1 -15,-0.1 -17,-0.0 -0.995 70.4-104.4-150.2 151.1 129.2 155.1 -47.4 26 31 A D > - 0 0 105 -2,-0.3 4,-0.9 1,-0.1 -2,-0.1 -0.257 41.7-102.1 -71.3 161.5 128.2 152.1 -49.6 27 32 A S T 4 S+ 0 0 109 1,-0.3 4,-0.5 2,-0.2 -1,-0.1 0.789 128.4 37.6 -53.9 -28.5 127.7 148.6 -48.2 28 33 A A T > S+ 0 0 50 2,-0.2 4,-1.8 1,-0.2 -1,-0.3 0.729 100.3 73.0 -95.0 -26.9 131.2 147.8 -49.5 29 34 A V H > S+ 0 0 5 1,-0.2 4,-0.8 2,-0.2 -2,-0.2 0.683 94.5 59.6 -61.0 -15.5 132.8 151.2 -48.7 30 35 A L H X S+ 0 0 95 -4,-0.9 4,-1.0 2,-0.2 3,-0.5 0.930 101.2 49.2 -78.1 -48.9 132.6 150.0 -45.1 31 36 A V H >> S+ 0 0 68 -4,-0.5 4,-2.2 -3,-0.2 3,-0.9 0.895 104.3 60.7 -57.4 -42.1 134.8 146.9 -45.6 32 37 A D H 3X S+ 0 0 24 -4,-1.8 4,-2.8 1,-0.3 5,-0.3 0.887 101.0 54.2 -53.0 -40.8 137.4 149.0 -47.4 33 38 A V H 3X S+ 0 0 9 -4,-0.8 4,-1.6 -3,-0.5 -1,-0.3 0.815 107.4 52.0 -63.3 -30.6 137.8 151.0 -44.2 34 39 A S H S+ 0 0 104 -3,-0.4 3,-1.7 1,-0.2 4,-0.1 0.855 109.7 59.4 -71.5 -35.7 161.2 156.1 -35.8 50 55 A V G > S+ 0 0 97 1,-0.3 3,-1.9 2,-0.2 -1,-0.2 0.720 87.7 76.4 -65.3 -21.0 161.3 156.6 -39.5 51 56 A Y G 3> S+ 0 0 26 -3,-0.4 4,-1.2 1,-0.3 3,-0.5 0.682 70.0 85.6 -64.6 -15.7 158.5 159.2 -39.0 52 57 A R G <4 + 0 0 236 -3,-1.7 -1,-0.3 1,-0.2 -2,-0.2 0.741 68.2 89.1 -56.8 -21.2 161.2 161.5 -37.7 53 58 A A T <4 S- 0 0 69 -3,-1.9 -1,-0.2 1,-0.2 -2,-0.1 0.919 120.7 -41.9 -39.2 -76.0 161.7 162.4 -41.4 54 59 A D T 4 S+ 0 0 77 -3,-0.5 4,-0.3 2,-0.1 -1,-0.2 -0.152 94.3 124.6-157.7 49.7 159.2 165.2 -41.6 55 60 A Y S < S+ 0 0 50 -4,-1.2 -2,-0.1 3,-0.1 -4,-0.1 -0.296 75.9 42.8-107.9 46.7 156.1 164.3 -39.7 56 61 A G S S+ 0 0 32 -4,-0.1 3,-0.5 -3,-0.0 4,-0.4 0.346 101.0 51.5-147.7 -66.8 156.1 167.3 -37.4 57 62 A P S > S+ 0 0 112 0, 0.0 3,-0.8 0, 0.0 4,-0.4 0.858 116.7 45.9 -51.2 -39.9 156.8 170.8 -38.9 58 63 A A G > S+ 0 0 32 -4,-0.3 3,-0.7 1,-0.2 7,-0.1 0.790 107.5 57.3 -75.1 -28.9 154.2 170.2 -41.6 59 64 A L G 3 S+ 0 0 11 -3,-0.5 -1,-0.2 1,-0.2 3,-0.1 0.403 89.2 77.9 -82.7 4.2 151.7 168.9 -39.0 60 65 A K G < S+ 0 0 171 -3,-0.8 -1,-0.2 -4,-0.4 -2,-0.2 0.825 114.8 15.0 -79.7 -32.9 152.0 172.2 -37.1 61 66 A N S X> S+ 0 0 89 -3,-0.7 3,-1.7 -4,-0.4 4,-1.6 -0.115 80.8 135.7-131.5 34.1 149.8 174.0 -39.6 62 67 A W T 34 + 0 0 3 1,-0.3 6,-0.1 2,-0.2 5,-0.1 0.696 70.0 66.1 -56.7 -18.7 148.2 170.9 -41.4 63 68 A K T 34 S+ 0 0 87 2,-0.2 -1,-0.3 1,-0.2 3,-0.2 0.846 116.3 25.5 -72.7 -32.4 144.9 172.8 -41.1 64 69 A R T <4 S+ 0 0 206 -3,-1.7 -2,-0.2 1,-0.2 -1,-0.2 0.427 140.7 31.8-105.4 -5.9 146.3 175.4 -43.5 65 70 A D S < S+ 0 0 51 -4,-1.6 4,-0.3 -7,-0.1 -2,-0.2 -0.367 70.5 132.5-150.0 62.5 148.6 172.9 -45.0 66 71 A L S >> S+ 0 0 2 -3,-0.2 3,-1.2 2,-0.2 4,-0.5 0.936 81.9 41.6 -78.6 -51.1 147.1 169.4 -44.9 67 72 A S H >> S+ 0 0 23 1,-0.2 4,-0.8 2,-0.2 3,-0.7 0.736 96.8 80.3 -68.8 -22.9 147.8 168.4 -48.5 68 73 A K H 34 S+ 0 0 144 1,-0.3 3,-0.3 2,-0.2 -1,-0.2 0.804 95.2 47.4 -53.9 -29.5 151.3 170.0 -48.2 69 74 A L H X4 S+ 0 0 7 -3,-1.2 3,-1.1 -4,-0.3 4,-0.4 0.758 101.1 64.0 -83.0 -27.1 152.3 166.8 -46.5 70 75 A F H - 0 0 102 1,-0.1 4,-2.2 -6,-0.1 3,-0.5 -0.112 64.7-101.7 -57.2 157.9 154.2 152.7 -54.5 80 85 A S H > S+ 0 0 66 1,-0.2 4,-1.7 2,-0.2 -1,-0.1 0.897 123.3 56.3 -48.0 -47.2 151.4 151.2 -52.5 81 86 A G H 4 S+ 0 0 45 1,-0.2 4,-0.5 2,-0.2 3,-0.3 0.908 110.8 42.3 -53.2 -46.6 153.7 150.9 -49.5 82 87 A R H >4 S+ 0 0 137 -3,-0.5 3,-0.7 1,-0.2 4,-0.3 0.791 108.4 61.4 -71.4 -28.4 154.5 154.6 -49.6 83 88 A I H >X S+ 0 0 4 -4,-2.2 3,-2.3 1,-0.2 4,-0.7 0.817 85.9 75.9 -67.3 -31.2 150.9 155.5 -50.2 84 89 A V H 3X S+ 0 0 20 -4,-1.7 4,-3.4 -3,-0.3 3,-0.5 0.876 82.9 66.5 -47.4 -43.0 149.9 153.9 -46.9 85 90 A G H <> S+ 0 0 2 -3,-0.7 4,-3.0 -4,-0.5 -1,-0.3 0.820 91.2 65.7 -49.4 -32.9 151.3 157.0 -45.2 86 91 A F H <> S+ 0 0 2 -3,-2.3 4,-0.9 -4,-0.3 -1,-0.2 0.964 114.7 25.8 -54.2 -58.8 148.4 158.9 -46.8 87 92 A F H X S+ 0 0 1 -4,-0.7 4,-1.0 -3,-0.5 3,-0.3 0.884 119.8 59.2 -73.9 -40.0 145.7 157.0 -44.9 88 93 A D H >X S+ 0 0 0 -4,-3.4 4,-1.5 1,-0.2 3,-0.8 0.888 100.9 56.7 -55.7 -41.3 148.0 156.2 -42.0 89 94 A V H 3X S+ 0 0 3 -4,-3.0 4,-2.3 -5,-0.3 5,-0.3 0.896 98.3 60.6 -58.4 -41.8 148.6 160.0 -41.4 90 95 A G H 3X S+ 0 0 0 -4,-0.9 4,-1.3 -3,-0.3 -1,-0.3 0.817 106.9 46.6 -56.1 -31.3 144.8 160.5 -41.1 91 96 A R H X>S+ 0 0 0 -4,-2.3 5,-1.9 3,-0.2 4,-0.7 0.758 116.2 52.3 -85.7 -27.8 146.3 163.3 -36.7 94 99 A C H 3<5S+ 0 0 0 -4,-1.3 -2,-0.2 -5,-0.3 -3,-0.2 0.701 117.5 38.8 -80.2 -20.8 142.9 162.0 -35.7 95 100 A E T 3<5S+ 0 0 77 -4,-1.2 -1,-0.2 4,-0.1 4,-0.1 -0.385 132.0 18.1-126.3 54.4 144.3 160.2 -32.7 96 101 A E T <45S+ 0 0 129 -3,-0.6 -3,-0.2 2,-0.2 3,-0.1 0.078 132.9 29.5 177.9 -44.3 146.9 162.6 -31.4 97 102 A V T <5S+ 0 0 54 -4,-0.7 2,-0.5 -5,-0.4 -3,-0.2 0.646 120.2 48.3-107.3 -24.3 146.3 166.1 -32.8 98 103 A L S - 0 0 57 -2,-1.3 4,-1.3 -5,-0.3 3,-0.3 0.089 48.9 -86.7 -44.9 163.8 135.2 169.5 -35.8 105 110 A E H > S+ 0 0 155 1,-0.2 4,-1.0 2,-0.2 -1,-0.2 0.771 128.9 64.5 -47.0 -27.2 136.2 171.8 -38.6 106 111 A D H >> S+ 0 0 53 2,-0.2 3,-2.0 1,-0.2 4,-0.8 0.989 94.5 51.8 -61.9 -64.8 139.7 170.4 -38.2 107 112 A H H >> S+ 0 0 1 -3,-0.3 4,-1.3 1,-0.3 3,-0.9 0.829 104.4 61.4 -41.9 -38.9 139.0 166.7 -39.1 108 113 A E H 3X S+ 0 0 80 -4,-1.3 4,-4.1 1,-0.3 5,-0.3 0.890 91.0 66.1 -57.8 -40.7 137.4 168.1 -42.3 109 114 A L H < S+ 0 0 55 -4,-4.0 3,-2.2 1,-0.2 -1,-0.2 0.984 114.1 33.2 -55.6 -64.3 142.2 163.1 -56.9 120 125 A E H 3< S+ 0 0 140 -4,-1.0 -1,-0.2 1,-0.3 -2,-0.2 0.745 120.2 55.8 -63.6 -20.3 145.1 164.8 -58.7 121 126 A N T 3< S+ 0 0 20 -4,-3.0 2,-8.4 -6,-0.3 3,-0.4 0.037 73.9 168.4 -96.7 20.4 147.1 161.9 -57.3 122 127 A N X + 0 0 94 -3,-2.2 3,-2.5 1,-0.3 4,-0.1 0.399 35.1 123.5 -20.4 5.1 144.7 159.5 -59.0 123 128 A L G >> + 0 0 17 -2,-8.4 3,-3.8 1,-0.3 4,-1.0 0.758 44.9 93.2 -45.9 -26.3 147.3 156.8 -58.0 124 129 A M G 34 + 0 0 8 -3,-0.4 -1,-0.3 -6,-0.4 -2,-0.1 0.779 62.4 81.9 -38.9 -33.7 144.3 155.2 -56.2 125 130 A N G <4 S+ 0 0 138 -3,-2.5 -1,-0.3 1,-0.3 -2,-0.2 0.769 105.9 28.4 -46.0 -28.6 143.9 153.3 -59.4 126 131 A H T <4 S+ 0 0 133 -3,-3.8 3,-0.3 -4,-0.1 -1,-0.3 0.627 93.3 121.1-107.0 -21.3 146.6 151.0 -58.0 127 132 A F S < S- 0 0 6 -4,-1.0 2,-0.2 1,-0.2 -48,-0.0 -0.074 91.2 -69.5 -44.3 141.1 145.9 151.5 -54.3 128 133 A P S S+ 0 0 59 0, 0.0 -1,-0.2 0, 0.0 -92,-0.1 -0.081 86.2 133.4 -39.1 94.8 145.1 148.2 -52.5 129 134 A L + 0 0 80 -3,-0.3 -2,-0.1 -2,-0.2 -97,-0.0 -0.151 49.7 69.9-144.0 41.5 141.7 147.6 -54.1 130 135 A E 0 0 180 0, 0.0 -3,-0.0 0, 0.0 0, 0.0 0.619 360.0 360.0-125.8 -39.6 141.7 143.9 -55.1 131 136 A D 0 0 175 -96,-0.0 -2,-0.1 0, 0.0 0, 0.0 -0.216 360.0 360.0 74.9 360.0 141.7 141.9 -51.9