==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 19-JUL-05 2ACM . COMPND 2 MOLECULE: MUCIN-1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR B.MACAO,D.G.A.JOHANSSON,G.C.HANSSON,T.HARD . 104 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6046.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 77 74.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 28 26.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 8.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 33 31.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1041 A S 0 0 65 0, 0.0 67,-2.3 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 159.6 83.9 -3.3 -6.9 2 1042 A F E -A 67 0A 127 65,-0.2 2,-0.3 102,-0.1 65,-0.2 -0.897 360.0-166.3-117.4 145.8 87.4 -1.9 -6.8 3 1043 A F E -A 66 0A 23 63,-3.4 63,-3.0 -2,-0.4 2,-0.7 -0.905 22.7-122.0-125.6 154.5 88.8 1.4 -5.5 4 1044 A F E -AB 65 103A 95 99,-2.4 99,-1.7 -2,-0.3 2,-0.4 -0.862 30.8-172.0 -99.9 116.3 92.1 3.2 -6.0 5 1045 A L E +AB 64 102A 0 59,-1.6 59,-2.4 -2,-0.7 2,-0.4 -0.920 7.2 174.1-113.1 132.8 93.8 3.9 -2.7 6 1046 A S E +AB 63 101A 30 95,-1.9 95,-2.0 -2,-0.4 2,-0.3 -0.997 7.3 153.1-136.7 140.6 96.9 6.0 -2.3 7 1047 A F E -AB 62 100A 0 55,-1.8 55,-2.6 -2,-0.4 2,-0.4 -0.988 32.1-123.6-160.5 164.2 98.8 7.2 0.8 8 1048 A H E -AB 61 99A 72 91,-1.0 90,-3.3 -2,-0.3 91,-0.5 -0.923 18.1-157.3-118.1 142.0 102.2 8.3 2.2 9 1049 A I E -AB 60 97A 3 51,-1.9 51,-1.6 -2,-0.4 88,-0.2 -0.941 17.0-178.4-120.5 140.3 104.1 6.9 5.1 10 1050 A S S S+ 0 0 72 86,-1.2 87,-0.1 -2,-0.4 -1,-0.1 0.596 77.9 76.0-105.1 -19.4 106.8 8.5 7.2 11 1051 A N S S+ 0 0 72 85,-0.8 2,-0.3 49,-0.1 -1,-0.1 0.785 103.2 38.9 -62.8 -28.3 107.4 5.5 9.4 12 1052 A L S S- 0 0 9 84,-0.3 2,-0.2 48,-0.1 48,-0.2 -0.934 75.6-139.5-126.8 150.3 109.4 4.0 6.6 13 1053 A Q - 0 0 157 -2,-0.3 2,-0.2 46,-0.1 47,-0.1 -0.683 37.4 -90.0-103.5 158.2 111.8 5.3 4.0 14 1054 A F - 0 0 56 45,-0.5 2,-0.3 -2,-0.2 -1,-0.1 -0.482 48.5-171.6 -70.2 134.0 111.9 4.3 0.3 15 1055 A N >> - 0 0 76 -2,-0.2 4,-0.8 1,-0.1 3,-0.7 -0.928 37.0-121.8-127.3 152.9 114.2 1.4 -0.3 16 1056 A S G >4 S+ 0 0 76 -2,-0.3 3,-1.0 1,-0.3 -1,-0.1 0.875 116.6 59.7 -57.1 -35.8 115.5 -0.3 -3.5 17 1057 A S G >4 S+ 0 0 33 1,-0.3 3,-1.0 2,-0.2 6,-0.5 0.881 104.1 48.8 -59.8 -37.6 113.9 -3.5 -2.1 18 1058 A L G <4 S+ 0 0 3 -3,-0.7 36,-0.3 1,-0.3 -1,-0.3 0.611 99.5 68.1 -77.5 -10.1 110.6 -1.7 -2.2 19 1059 A E G << S+ 0 0 120 -3,-1.0 -1,-0.3 -4,-0.8 -2,-0.2 0.128 111.6 33.2 -91.6 18.5 111.5 -0.7 -5.7 20 1060 A D X - 0 0 87 -3,-1.0 3,-1.0 -5,-0.2 6,-0.3 -0.767 69.9-142.2-172.8 122.8 111.1 -4.3 -6.6 21 1061 A P T 3 S+ 0 0 72 0, 0.0 6,-0.1 0, 0.0 -3,-0.1 0.406 87.3 94.3 -72.0 6.5 108.7 -7.1 -5.2 22 1062 A S T 3 S+ 0 0 101 -5,-0.2 2,-0.3 4,-0.1 -4,-0.1 0.413 75.1 78.4 -77.6 3.0 111.7 -9.4 -5.6 23 1063 A T S <> S- 0 0 31 -3,-1.0 4,-1.9 -6,-0.5 3,-0.2 -0.886 79.2-134.7-117.0 147.0 112.5 -8.6 -1.9 24 1064 A D H > S+ 0 0 107 -2,-0.3 4,-3.4 1,-0.2 5,-0.3 0.792 104.4 63.6 -65.5 -30.7 110.9 -10.0 1.2 25 1065 A Y H > S+ 0 0 109 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.934 107.0 43.3 -60.6 -44.2 110.7 -6.5 2.7 26 1066 A Y H > S+ 0 0 18 -6,-0.3 4,-2.4 2,-0.2 -2,-0.2 0.933 115.9 47.2 -65.0 -49.3 108.4 -5.5 -0.0 27 1067 A Q H X S+ 0 0 87 -4,-1.9 4,-1.7 2,-0.2 -2,-0.2 0.911 116.8 43.3 -61.6 -43.8 106.3 -8.7 0.2 28 1068 A E H X S+ 0 0 111 -4,-3.4 4,-3.7 2,-0.2 5,-0.3 0.923 108.9 57.9 -68.8 -43.6 106.0 -8.5 3.9 29 1069 A L H X S+ 0 0 15 -4,-2.7 4,-3.0 -5,-0.3 5,-0.3 0.944 106.5 49.5 -51.6 -49.3 105.3 -4.8 3.9 30 1070 A Q H X S+ 0 0 26 -4,-2.4 4,-3.5 1,-0.2 -1,-0.2 0.917 112.9 47.9 -52.8 -46.4 102.3 -5.5 1.7 31 1071 A R H X S+ 0 0 153 -4,-1.7 4,-3.7 2,-0.2 -2,-0.2 0.915 109.9 51.0 -62.5 -45.1 101.2 -8.1 4.1 32 1072 A D H X S+ 0 0 77 -4,-3.7 4,-3.0 2,-0.2 -2,-0.2 0.927 115.0 43.5 -60.2 -43.0 101.7 -5.9 7.1 33 1073 A I H X S+ 0 0 5 -4,-3.0 4,-3.0 -5,-0.3 -2,-0.2 0.923 114.6 49.7 -66.8 -43.3 99.6 -3.2 5.4 34 1074 A S H X S+ 0 0 24 -4,-3.5 4,-2.1 -5,-0.3 -2,-0.2 0.898 112.9 48.0 -61.5 -39.5 97.1 -5.9 4.3 35 1075 A E H X S+ 0 0 104 -4,-3.7 4,-0.7 2,-0.2 -2,-0.2 0.937 113.2 47.0 -65.4 -47.1 97.1 -7.1 7.9 36 1076 A M H >X S+ 0 0 2 -4,-3.0 4,-1.1 1,-0.2 3,-0.7 0.873 110.3 53.4 -61.8 -39.9 96.6 -3.6 9.2 37 1077 A F H >X S+ 0 0 0 -4,-3.0 4,-2.7 1,-0.2 3,-0.7 0.915 99.1 61.5 -63.0 -44.1 93.9 -2.9 6.7 38 1078 A L H 3< S+ 0 0 62 -4,-2.1 -1,-0.2 1,-0.3 -2,-0.2 0.772 103.6 52.9 -53.7 -26.2 91.9 -5.9 7.7 39 1079 A Q H << S+ 0 0 51 -3,-0.7 3,-0.3 -4,-0.7 -1,-0.3 0.847 110.9 44.9 -77.2 -37.3 91.7 -4.3 11.2 40 1080 A I H << S+ 0 0 5 -4,-1.1 3,-0.3 -3,-0.7 -2,-0.2 0.865 120.6 37.6 -73.2 -42.3 90.3 -1.0 9.8 41 1081 A Y ><> + 0 0 1 -4,-2.7 3,-2.4 1,-0.2 5,-0.8 0.195 68.9 133.6 -96.9 12.8 87.8 -2.6 7.4 42 1082 A K T 3 5 + 0 0 128 -3,-0.3 -1,-0.2 1,-0.3 -2,-0.1 0.676 47.1 100.0 -38.9 -15.1 86.8 -5.5 9.7 43 1083 A Q T 3 5S- 0 0 121 -3,-0.3 -1,-0.3 1,-0.2 -2,-0.1 0.777 101.3-118.4 -45.1 -25.9 83.3 -4.3 8.7 44 1084 A G T < 5S+ 0 0 38 -3,-2.4 -1,-0.2 -6,-0.1 -2,-0.1 0.048 93.0 105.9 107.9 -23.7 83.6 -7.3 6.3 45 1085 A G T 5 + 0 0 5 -4,-0.3 24,-1.8 23,-0.1 28,-0.1 0.782 59.1 101.2 -57.2 -26.3 83.4 -5.2 3.1 46 1086 A F E < +C 68 0A 15 -5,-0.8 22,-0.2 22,-0.2 3,-0.1 -0.319 40.1 166.0 -62.7 141.2 87.1 -5.9 2.7 47 1087 A L E - 0 0 91 20,-1.5 2,-0.3 1,-0.3 -1,-0.1 0.650 53.4 -64.1-123.6 -43.1 88.1 -8.7 0.3 48 1088 A G E -C 67 0A 27 19,-0.7 19,-1.4 2,-0.0 2,-0.4 -0.944 45.6 -82.5 167.4 173.5 91.9 -8.3 -0.3 49 1089 A L E +C 66 0A 36 -2,-0.3 2,-0.3 17,-0.2 17,-0.2 -0.872 45.6 170.1-104.6 132.4 94.8 -6.2 -1.6 50 1090 A S E +C 65 0A 40 15,-2.0 15,-2.0 -2,-0.4 -2,-0.0 -0.993 51.2 17.9-143.5 152.1 95.7 -6.2 -5.3 51 1091 A N E S- 0 0 106 -2,-0.3 2,-0.2 13,-0.2 -1,-0.2 0.939 74.0-173.1 58.5 52.0 97.9 -4.4 -7.8 52 1092 A I E + 0 0 26 12,-0.2 2,-0.3 -3,-0.1 12,-0.2 -0.546 8.0 178.6 -79.9 142.8 100.1 -2.8 -5.2 53 1093 A K E -C 63 0A 110 10,-1.0 10,-3.3 -2,-0.2 2,-0.3 -0.995 10.1-158.8-146.4 135.5 102.7 -0.2 -6.3 54 1094 A F E +C 62 0A 21 -2,-0.3 8,-0.2 -36,-0.3 6,-0.0 -0.808 11.3 175.6-115.2 155.4 105.2 1.8 -4.2 55 1095 A R E -C 61 0A 125 6,-1.5 6,-3.4 -2,-0.3 -2,-0.0 -0.991 37.3 -88.6-155.5 151.3 107.1 5.0 -5.0 56 1096 A P E C 60 0A 90 0, 0.0 4,-0.2 0, 0.0 -43,-0.0 -0.277 360.0 360.0 -61.9 146.8 109.5 7.4 -3.3 57 1097 A G 0 0 79 2,-2.1 -43,-0.2 -48,-0.1 -49,-0.0 -0.958 360.0 360.0-132.5 360.0 107.9 10.2 -1.3 58 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 59 1098 B S 0 0 55 0, 0.0 -2,-2.1 0, 0.0 -45,-0.5 0.000 360.0 360.0 360.0 180.0 108.7 8.5 3.1 60 1099 B V E -AC 9 56A 0 -51,-1.6 -51,-1.9 -4,-0.2 2,-0.6 -0.991 360.0-150.9-132.6 133.4 107.0 6.3 0.6 61 1100 B V E -AC 8 55A 21 -6,-3.4 -6,-1.5 -2,-0.4 2,-0.5 -0.878 21.5-167.3-100.8 117.3 104.0 6.9 -1.7 62 1101 B V E -AC 7 54A 2 -55,-2.6 -55,-1.8 -2,-0.6 2,-0.5 -0.915 9.7-172.0-112.8 134.4 102.1 3.8 -2.3 63 1102 B Q E +AC 6 53A 73 -10,-3.3 -10,-1.0 -2,-0.5 2,-0.2 -0.980 23.4 141.8-126.5 119.3 99.4 3.3 -4.9 64 1103 B L E -A 5 0A 7 -59,-2.4 -59,-1.6 -2,-0.5 2,-0.5 -0.776 48.1 -97.0-140.7-173.7 97.3 0.2 -5.0 65 1104 B T E -AC 4 50A 18 -15,-2.0 -15,-2.0 -2,-0.2 2,-0.5 -0.962 28.0-159.6-118.2 124.0 93.9 -1.2 -5.6 66 1105 B L E -AC 3 49A 0 -63,-3.0 -63,-3.4 -2,-0.5 2,-0.5 -0.888 9.1-150.9-105.3 126.9 91.5 -1.8 -2.7 67 1106 B A E +AC 2 48A 7 -19,-1.4 -20,-1.5 -2,-0.5 -19,-0.7 -0.863 18.7 173.0-104.2 128.9 88.6 -4.2 -3.3 68 1107 B F E - C 0 46A 1 -67,-2.3 -22,-0.2 -2,-0.5 -23,-0.1 -0.936 38.4 -94.0-130.4 154.5 85.3 -4.0 -1.4 69 1108 B R >> - 0 0 135 -24,-1.8 3,-0.9 -2,-0.3 4,-0.9 -0.307 46.6-110.5 -63.7 146.5 82.0 -5.7 -1.7 70 1109 B E T 34 S+ 0 0 163 1,-0.2 -1,-0.1 2,-0.1 4,-0.1 -0.661 98.8 16.2 -84.6 134.3 79.4 -3.9 -3.8 71 1110 B G T 34 S+ 0 0 81 -2,-0.4 -1,-0.2 2,-0.2 3,-0.1 0.673 115.1 78.9 81.0 17.8 76.4 -2.3 -2.1 72 1111 B T T <4 S+ 0 0 74 -3,-0.9 2,-0.4 1,-0.4 -2,-0.1 0.709 93.4 19.0-115.3 -68.8 78.2 -2.6 1.3 73 1112 B I < - 0 0 10 -4,-0.9 -1,-0.4 -28,-0.1 -2,-0.2 -0.932 65.2-149.8-116.8 136.3 80.8 0.1 1.8 74 1113 B N >> - 0 0 95 -2,-0.4 4,-2.0 -3,-0.1 3,-0.5 -0.623 31.5-110.1 -99.9 160.1 81.0 3.4 -0.1 75 1114 B V H 3> S+ 0 0 39 1,-0.3 4,-2.0 -2,-0.2 5,-0.2 0.859 120.7 58.2 -56.5 -34.4 84.2 5.4 -0.8 76 1115 B H H 3> S+ 0 0 124 1,-0.2 4,-1.4 2,-0.2 -1,-0.3 0.891 105.5 48.0 -62.7 -41.0 82.9 7.9 1.7 77 1116 B D H <> S+ 0 0 48 -3,-0.5 4,-2.2 2,-0.2 5,-0.2 0.862 107.4 56.2 -69.0 -35.9 82.8 5.3 4.5 78 1117 B V H X S+ 0 0 1 -4,-2.0 4,-2.7 1,-0.2 5,-0.3 0.939 106.6 49.0 -62.0 -46.4 86.3 4.1 3.6 79 1118 B E H X S+ 0 0 73 -4,-2.0 4,-2.2 1,-0.2 5,-0.3 0.863 109.5 55.4 -60.0 -36.3 87.8 7.5 4.1 80 1119 B T H X S+ 0 0 45 -4,-1.4 4,-1.8 2,-0.2 -2,-0.2 0.941 113.3 37.2 -63.9 -50.3 85.9 7.8 7.4 81 1120 B Q H X S+ 0 0 24 -4,-2.2 4,-2.6 2,-0.2 -2,-0.2 0.925 117.6 50.1 -69.7 -45.7 87.4 4.6 8.9 82 1121 B F H X S+ 0 0 1 -4,-2.7 4,-1.4 2,-0.2 -2,-0.2 0.935 114.2 43.8 -60.4 -47.1 90.9 5.0 7.5 83 1122 B N H < S+ 0 0 65 -4,-2.2 4,-0.5 -5,-0.3 -1,-0.2 0.905 117.6 46.7 -64.3 -39.0 91.2 8.6 8.7 84 1123 B Q H X S+ 0 0 128 -4,-1.8 4,-0.6 -5,-0.3 3,-0.3 0.808 117.4 43.7 -70.2 -30.9 89.8 7.5 12.0 85 1124 B Y H X>S+ 0 0 43 -4,-2.6 4,-3.6 1,-0.2 5,-0.8 0.547 86.3 92.4 -91.3 -9.5 92.1 4.5 12.1 86 1125 B K H X5S+ 0 0 47 -4,-1.4 4,-0.7 1,-0.2 -1,-0.2 0.910 97.8 34.9 -51.3 -43.4 95.2 6.4 10.9 87 1126 B T H >5S+ 0 0 115 -4,-0.5 4,-2.1 -3,-0.3 -1,-0.2 0.920 126.5 38.1 -76.0 -47.3 96.1 7.0 14.6 88 1127 B E H X5S+ 0 0 59 -4,-0.6 4,-2.7 2,-0.3 5,-0.2 0.937 117.0 48.5 -72.6 -46.5 94.8 3.7 16.0 89 1128 B A H X5S+ 0 0 0 -4,-3.6 4,-2.0 1,-0.2 6,-0.3 0.889 115.6 49.3 -59.5 -32.8 95.9 1.5 13.1 90 1129 B A H X