==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA/ANTIBIOTIC 21-JUL-05 2ADW . COMPND 2 MOLECULE: 5'-D(*AP*CP*GP*TP*AP*CP*GP*T)-3'; . SOURCE 2 SYNTHETIC: YES; . AUTHOR J.A.CUESTA-SEIJO,G.M.SHELDRICK . 32 8 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3235.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 2 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 H X 0 0 104 0, 0.0 2,-0.1 0, 0.0 7,-0.0 0.000 360.0 360.0 360.0 -23.0 -10.1 24.0 -2.1 2 2 H A - 0 0 58 1,-0.1 7,-0.5 7,-0.0 2,-0.2 -0.449 360.0-154.1 -76.9 157.0 -9.6 22.1 1.2 3 3 H X 0 0 95 5,-0.2 5,-0.2 6,-0.1 -1,-0.1 -0.484 360.0 360.0-126.8 63.4 -10.2 23.8 4.5 4 4 H X 0 0 138 3,-0.5 3,-0.2 -2,-0.2 4,-0.1 -0.056 360.0 360.0-106.4 360.0 -8.1 22.1 7.1 5 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 6 5 H X 0 0 100 0, 0.0 2,-0.1 0, 0.0 -3,-0.0 0.000 360.0 360.0 360.0 -25.5 -5.7 26.1 7.8 7 6 H A - 0 0 57 -3,-0.2 -3,-0.5 1,-0.1 2,-0.1 -0.515 360.0-154.4 -76.2 154.1 -6.7 28.2 4.9 8 7 H X 0 0 103 -5,-0.2 -5,-0.2 -2,-0.1 -1,-0.1 -0.504 360.0 360.0-126.5 64.6 -9.9 27.2 3.0 9 8 H X 0 0 139 -7,-0.5 -1,-0.1 -2,-0.1 -6,-0.1 0.865 360.0 360.0 -81.8 360.0 -9.6 28.4 -0.5 10 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 11 1 I X 0 0 103 0, 0.0 2,-0.1 0, 0.0 7,-0.0 0.000 360.0 360.0 360.0 -22.1 -17.7 33.1 -18.8 12 2 I A - 0 0 63 1,-0.1 7,-0.5 7,-0.0 2,-0.1 -0.445 360.0-152.1 -72.2 158.8 -16.9 33.0 -15.1 13 3 I X 0 0 90 5,-0.2 5,-0.2 1,-0.1 -1,-0.1 -0.489 360.0 360.0-130.9 64.0 -13.3 33.8 -14.0 14 4 I X 0 0 149 3,-0.4 -1,-0.1 -2,-0.1 4,-0.1 0.920 360.0 360.0 -74.6 360.0 -12.6 32.0 -10.8 15 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 16 5 I X 0 0 101 0, 0.0 2,-0.1 0, 0.0 -3,-0.0 0.000 360.0 360.0 360.0 -20.1 -9.0 29.7 -12.8 17 6 I A - 0 0 56 1,-0.1 -3,-0.4 -3,-0.0 2,-0.2 -0.460 360.0-153.3 -74.7 155.2 -9.5 30.4 -16.5 18 7 I X 0 0 114 -5,-0.2 -5,-0.2 -2,-0.1 -1,-0.1 -0.483 360.0 360.0-126.9 63.2 -11.8 33.4 -17.3 19 8 I X 0 0 147 -7,-0.5 -1,-0.1 -2,-0.2 -6,-0.1 0.916 360.0 360.0 -77.6 360.0 -13.3 32.7 -20.7 20 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 21 1 J X 0 0 104 0, 0.0 2,-0.1 0, 0.0 7,-0.0 0.000 360.0 360.0 360.0 -25.5 7.5 21.2 35.5 22 2 J A - 0 0 65 7,-0.2 7,-0.5 1,-0.1 2,-0.1 -0.528 360.0-149.9 -79.0 154.0 7.0 20.6 39.2 23 3 J X 0 0 85 5,-0.2 5,-0.2 -2,-0.1 -1,-0.1 -0.532 360.0 360.0-133.5 67.7 8.9 22.8 41.7 24 4 J X 0 0 141 3,-0.5 3,-0.2 -2,-0.1 4,-0.1 -0.203 360.0 360.0-117.5 360.0 9.8 21.1 44.9 25 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 26 5 J X 0 0 107 0, 0.0 2,-0.2 0, 0.0 -3,-0.0 0.000 360.0 360.0 360.0 -20.7 14.5 21.5 44.2 27 6 J A - 0 0 56 -3,-0.2 -3,-0.5 1,-0.0 2,-0.2 -0.517 360.0-152.7 -80.3 152.1 14.5 22.7 40.6 28 7 J X 0 0 111 -5,-0.2 -5,-0.2 -2,-0.2 -1,-0.0 -0.546 360.0 360.0-124.0 66.9 11.4 24.3 39.2 29 8 J X 0 0 135 -7,-0.5 -7,-0.2 -2,-0.2 -6,-0.1 -0.220 360.0 360.0-115.6 360.0 11.4 23.8 35.4 30 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 31 1 K X 0 0 105 0, 0.0 2,-0.0 0, 0.0 7,-0.0 0.000 360.0 360.0 360.0 -30.7 4.4 26.2 15.7 32 2 K A - 0 0 60 7,-0.2 7,-0.5 1,-0.1 2,-0.2 -0.364 360.0-149.1 -69.9 156.6 5.0 27.3 19.3 33 3 K X 0 0 96 5,-0.2 5,-0.2 6,-0.1 -1,-0.1 -0.508 360.0 360.0-123.0 68.6 8.1 26.0 21.0 34 4 K X 0 0 139 3,-0.5 3,-0.2 -2,-0.2 4,-0.1 -0.191 360.0 360.0-113.1 360.0 7.4 25.5 24.7 35 ! 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 36 5 K X 0 0 106 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -27.2 8.3 21.0 24.6 37 6 K A - 0 0 56 -3,-0.2 -3,-0.5 1,-0.1 2,-0.3 -0.438 360.0-150.1 -76.2 154.6 8.4 20.3 20.9 38 7 K X 0 0 112 -5,-0.2 -5,-0.2 1,-0.1 -1,-0.1 -0.673 360.0 360.0-125.4 75.5 9.0 23.2 18.4 39 8 K X 0 0 140 -7,-0.5 -7,-0.2 -2,-0.3 -6,-0.1 -0.121 360.0 360.0-122.0 360.0 7.2 22.5 15.1