==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION/RNA 22-JAN-10 3ADL . COMPND 2 MOLECULE: RISC-LOADING COMPLEX SUBUNIT TARBP2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR Y.A.YUAN,H.Y.CHEN . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5507.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 48 63.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 22.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 31.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 152 A G 0 0 97 0, 0.0 2,-0.4 0, 0.0 64,-0.0 0.000 360.0 360.0 360.0-100.4 14.8 -7.5 1.5 2 153 A L - 0 0 176 63,-0.0 3,-0.0 3,-0.0 0, 0.0 -0.835 360.0-165.1-107.4 137.7 17.8 -5.3 2.2 3 154 A V - 0 0 21 -2,-0.4 3,-0.1 1,-0.1 62,-0.1 -0.796 47.0 -85.7-101.1 146.1 18.1 -1.9 4.0 4 155 A P > - 0 0 87 0, 0.0 3,-1.6 0, 0.0 5,-0.1 -0.340 56.5 -92.5 -57.9 136.1 21.4 0.1 3.5 5 156 A R T 3 S+ 0 0 243 1,-0.3 3,-0.1 3,-0.0 -3,-0.0 -0.245 106.9 3.7 -57.1 124.5 24.0 -0.9 6.1 6 157 A G T 3 S+ 0 0 61 1,-0.3 2,-0.3 -3,-0.1 -1,-0.3 0.783 96.7 134.9 70.4 30.1 23.9 1.3 9.2 7 158 A S < - 0 0 39 -3,-1.6 2,-0.8 -4,-0.0 -1,-0.3 -0.829 53.9-133.8-108.1 151.0 20.9 3.2 8.1 8 159 A H > + 0 0 154 -2,-0.3 4,-2.5 1,-0.2 5,-0.2 -0.776 27.4 173.3-110.3 87.1 18.0 4.0 10.5 9 160 A E H > S+ 0 0 25 -2,-0.8 4,-2.1 2,-0.2 5,-0.2 0.920 75.9 43.4 -64.4 -50.9 14.7 3.2 8.6 10 161 A V H > S+ 0 0 43 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.916 119.4 43.3 -62.4 -46.5 12.1 3.6 11.4 11 162 A G H > S+ 0 0 28 2,-0.2 4,-2.8 1,-0.2 5,-0.2 0.878 112.3 53.2 -69.4 -37.1 13.7 6.9 12.7 12 163 A A H X S+ 0 0 41 -4,-2.5 4,-2.4 2,-0.2 -1,-0.2 0.897 111.4 45.7 -65.6 -41.0 14.3 8.3 9.3 13 164 A L H X S+ 0 0 0 -4,-2.1 4,-2.7 -5,-0.2 5,-0.2 0.922 112.8 50.7 -66.1 -43.4 10.6 7.8 8.3 14 165 A Q H X S+ 0 0 90 -4,-2.1 4,-1.7 1,-0.2 -2,-0.2 0.936 113.7 44.6 -61.9 -45.1 9.4 9.3 11.6 15 166 A E H X S+ 0 0 134 -4,-2.8 4,-1.7 1,-0.2 -1,-0.2 0.864 113.1 51.4 -65.6 -40.9 11.6 12.3 11.2 16 167 A L H X S+ 0 0 36 -4,-2.4 4,-1.5 -5,-0.2 -2,-0.2 0.940 110.1 47.3 -61.1 -47.5 10.6 12.7 7.5 17 168 A V H <>S+ 0 0 0 -4,-2.7 5,-2.7 1,-0.2 4,-0.5 0.866 108.0 56.2 -69.8 -31.4 6.8 12.6 8.2 18 169 A V H ><5S+ 0 0 71 -4,-1.7 3,-1.1 -5,-0.2 -1,-0.2 0.919 108.3 48.7 -59.0 -44.4 7.2 15.1 11.1 19 170 A Q H 3<5S+ 0 0 170 -4,-1.7 -1,-0.2 1,-0.3 -2,-0.2 0.756 107.1 54.3 -71.9 -24.0 8.8 17.6 8.6 20 171 A K T 3<5S- 0 0 113 -4,-1.5 -1,-0.3 -5,-0.1 -2,-0.2 0.573 119.3-114.3 -79.5 -6.8 6.0 17.0 6.1 21 172 A G T < 5S+ 0 0 66 -3,-1.1 2,-0.3 -4,-0.5 -3,-0.2 0.783 71.3 134.9 78.7 30.4 3.6 18.0 8.9 22 173 A W < - 0 0 47 -5,-2.7 -1,-0.3 -6,-0.1 -2,-0.1 -0.722 60.7-101.7-104.9 155.4 2.0 14.5 9.1 23 174 A R - 0 0 224 -2,-0.3 25,-0.2 1,-0.1 3,-0.1 -0.374 55.8 -79.8 -67.8 159.4 1.1 12.4 12.2 24 175 A L - 0 0 92 1,-0.1 -1,-0.1 23,-0.1 24,-0.1 -0.226 53.7 -95.5 -63.5 148.3 3.5 9.6 13.1 25 176 A P - 0 0 18 0, 0.0 2,-0.5 0, 0.0 22,-0.2 -0.197 32.8-133.6 -61.9 155.5 3.2 6.3 11.2 26 177 A E E -A 46 0A 108 20,-2.7 20,-2.3 -3,-0.1 2,-0.5 -0.969 18.1-161.7-112.4 130.0 1.2 3.5 12.7 27 178 A Y E +A 45 0A 50 -2,-0.5 2,-0.4 18,-0.2 18,-0.2 -0.935 14.0 169.4-114.5 127.5 2.7 -0.0 12.8 28 179 A T E -A 44 0A 38 16,-2.2 16,-3.2 -2,-0.5 2,-0.6 -0.999 37.2-119.9-137.4 137.5 0.7 -3.1 13.2 29 180 A V E +A 43 0A 58 -2,-0.4 14,-0.2 14,-0.2 3,-0.1 -0.645 35.9 170.1 -72.5 118.2 1.6 -6.9 12.8 30 181 A T E + 0 0 73 12,-2.1 2,-0.3 -2,-0.6 13,-0.2 0.402 58.3 27.0-114.1 -1.6 -0.8 -8.1 10.1 31 182 A Q E +A 42 0A 115 11,-1.2 11,-2.7 2,-0.0 2,-0.3 -0.937 48.2 177.1-159.7 142.1 0.6 -11.6 9.4 32 183 A E E +A 41 0A 91 -2,-0.3 2,-0.2 9,-0.2 9,-0.2 -0.968 19.4 170.1-139.2 126.8 2.6 -14.4 11.2 33 184 A S E +A 40 0A 53 7,-2.5 7,-1.6 -2,-0.3 5,-0.1 -0.774 29.5 35.9-129.0 174.7 3.4 -17.7 9.4 34 185 A G S S- 0 0 49 -2,-0.2 5,-0.1 5,-0.2 6,-0.1 0.241 87.8 -42.6 74.7 166.4 5.5 -20.8 9.8 35 186 A P > - 0 0 71 0, 0.0 3,-1.8 0, 0.0 -2,-0.1 -0.202 59.7-103.0 -61.1 156.4 6.5 -22.9 12.8 36 187 A A T 3 S+ 0 0 102 1,-0.3 3,-0.3 2,-0.1 -2,-0.0 0.605 123.5 51.2 -57.3 -16.6 7.7 -21.4 16.1 37 188 A H T 3 S+ 0 0 149 1,-0.2 -1,-0.3 0, 0.0 -3,-0.0 0.531 121.1 30.0-100.9 -12.0 11.3 -22.2 15.1 38 189 A R S < S+ 0 0 197 -3,-1.8 -1,-0.2 -5,-0.1 -2,-0.1 -0.398 85.3 166.1-140.4 61.5 11.1 -20.7 11.6 39 190 A K - 0 0 70 -3,-0.3 2,-0.4 18,-0.2 -5,-0.2 -0.430 19.5-162.7 -80.1 148.7 8.6 -17.8 12.0 40 191 A E E -A 33 0A 99 -7,-1.6 -7,-2.5 -2,-0.1 2,-0.3 -0.998 8.5-159.3-130.1 136.7 8.1 -15.0 9.5 41 192 A F E -AB 32 56A 26 15,-3.3 15,-2.5 -2,-0.4 2,-0.4 -0.838 8.0-154.7-114.6 149.7 6.3 -11.8 10.4 42 193 A T E -AB 31 55A 19 -11,-2.7 -12,-2.1 -2,-0.3 -11,-1.2 -0.994 10.4-164.7-122.6 123.4 4.6 -9.1 8.3 43 194 A M E -AB 29 54A 16 11,-3.2 11,-2.7 -2,-0.4 2,-0.4 -0.910 9.1-147.3-102.8 134.7 4.3 -5.5 9.6 44 195 A T E -AB 28 53A 10 -16,-3.2 -16,-2.2 -2,-0.4 2,-0.5 -0.878 9.5-160.2 -95.8 132.4 1.9 -3.0 8.1 45 196 A C E -AB 27 52A 0 7,-3.1 7,-2.6 -2,-0.4 2,-0.4 -0.960 8.9-175.0-110.2 127.8 2.9 0.7 8.1 46 197 A R E +AB 26 51A 110 -20,-2.3 -20,-2.7 -2,-0.5 2,-0.3 -0.989 12.2 156.3-123.0 129.2 0.3 3.4 7.6 47 198 A V E > - B 0 50A 7 3,-1.6 3,-2.7 -2,-0.4 -23,-0.1 -0.961 64.0 -35.2-152.6 139.3 0.9 7.1 7.3 48 199 A E T 3 S- 0 0 109 -2,-0.3 -24,-0.0 1,-0.3 -31,-0.0 -0.298 127.8 -22.9 50.3-118.0 -1.2 9.9 5.7 49 200 A R T 3 S+ 0 0 177 -3,-0.1 -1,-0.3 2,-0.0 2,-0.2 0.394 117.9 99.9 -97.7 -0.2 -2.8 8.2 2.7 50 201 A F E < -B 47 0A 32 -3,-2.7 -3,-1.6 2,-0.0 2,-0.4 -0.593 44.2-175.1 -98.4 148.0 -0.2 5.3 2.3 51 202 A I E +B 46 0A 112 -2,-0.2 2,-0.4 -5,-0.2 -5,-0.2 -0.970 15.4 167.6-139.1 118.9 -0.2 1.7 3.4 52 203 A E E -B 45 0A 31 -7,-2.6 -7,-3.1 -2,-0.4 2,-0.3 -0.996 19.9-144.2-134.4 143.9 2.9 -0.4 2.9 53 204 A I E -B 44 0A 80 -2,-0.4 2,-0.3 -9,-0.2 -9,-0.2 -0.783 11.3-173.8-108.9 150.5 3.9 -3.8 4.2 54 205 A G E -B 43 0A 7 -11,-2.7 -11,-3.2 -2,-0.3 2,-0.3 -0.991 7.7-163.3-134.7 146.9 7.3 -5.2 5.3 55 206 A S E +B 42 0A 70 -2,-0.3 2,-0.3 -13,-0.3 -13,-0.2 -0.920 16.0 147.7-131.0 158.9 8.2 -8.8 6.3 56 207 A G E -B 41 0A 11 -15,-2.5 -15,-3.3 -2,-0.3 6,-0.1 -0.989 58.8 -87.5-171.9 173.7 11.0 -10.6 8.1 57 208 A T S S+ 0 0 94 -2,-0.3 2,-0.3 -17,-0.2 -18,-0.2 0.469 113.7 27.2 -74.0 -4.6 12.3 -13.4 10.3 58 209 A S S > S- 0 0 38 -17,-0.2 4,-2.7 1,-0.1 -17,-0.2 -0.971 85.0-111.9-148.7 163.0 11.5 -11.1 13.3 59 210 A K H > S+ 0 0 103 -2,-0.3 4,-2.8 2,-0.2 5,-0.2 0.870 118.2 53.5 -61.7 -42.3 9.1 -8.3 14.1 60 211 A K H > S+ 0 0 141 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.925 112.2 44.7 -59.1 -47.6 12.0 -5.8 14.3 61 212 A L H > S+ 0 0 54 2,-0.2 4,-2.2 1,-0.2 -2,-0.2 0.928 113.2 50.8 -62.0 -44.7 13.1 -6.8 10.8 62 213 A A H X S+ 0 0 0 -4,-2.7 4,-2.1 1,-0.2 -19,-0.2 0.922 112.2 47.0 -57.0 -47.1 9.5 -6.8 9.4 63 214 A K H X S+ 0 0 74 -4,-2.8 4,-2.5 1,-0.2 -1,-0.2 0.883 110.9 50.5 -65.1 -43.1 9.0 -3.3 10.8 64 215 A R H X S+ 0 0 95 -4,-2.2 4,-2.3 2,-0.2 -1,-0.2 0.861 111.7 48.9 -59.6 -40.3 12.3 -2.0 9.4 65 216 A N H X S+ 0 0 29 -4,-2.2 4,-2.1 2,-0.2 -2,-0.2 0.857 110.4 51.7 -71.8 -32.3 11.3 -3.4 6.0 66 217 A A H X S+ 0 0 0 -4,-2.1 4,-2.3 2,-0.2 -2,-0.2 0.909 111.0 47.1 -65.7 -45.0 7.9 -1.7 6.3 67 218 A A H X S+ 0 0 0 -4,-2.5 4,-2.8 2,-0.2 -2,-0.2 0.913 110.9 51.7 -61.8 -45.0 9.5 1.6 7.1 68 219 A A H X S+ 0 0 15 -4,-2.3 4,-2.3 2,-0.2 -2,-0.2 0.936 110.5 48.4 -56.0 -50.6 11.9 1.3 4.2 69 220 A K H X S+ 0 0 93 -4,-2.1 4,-2.5 1,-0.2 -1,-0.2 0.906 112.4 49.3 -57.4 -43.4 9.0 0.5 1.8 70 221 A M H X S+ 0 0 0 -4,-2.3 4,-3.2 2,-0.2 5,-0.3 0.911 107.9 53.2 -64.2 -42.3 7.1 3.5 3.1 71 222 A L H X S+ 0 0 18 -4,-2.8 4,-2.5 1,-0.2 -2,-0.2 0.914 110.6 47.8 -56.9 -44.3 10.2 5.8 2.7 72 223 A L H X S+ 0 0 115 -4,-2.3 4,-1.3 2,-0.2 -2,-0.2 0.927 113.0 49.2 -61.4 -44.1 10.4 4.6 -0.9 73 224 A R H >< S+ 0 0 124 -4,-2.5 3,-0.5 2,-0.2 -2,-0.2 0.963 115.4 41.6 -60.6 -53.9 6.7 5.3 -1.4 74 225 A V H 3< S+ 0 0 23 -4,-3.2 -2,-0.2 1,-0.2 -1,-0.2 0.875 116.6 47.7 -64.3 -41.8 6.8 8.8 0.2 75 226 A H H 3< 0 0 130 -4,-2.5 -1,-0.2 -5,-0.3 -2,-0.2 0.665 360.0 360.0 -74.3 -18.3 10.0 9.9 -1.5 76 227 A T << 0 0 145 -4,-1.3 -2,-0.2 -3,-0.5 -1,-0.2 0.544 360.0 360.0-109.9 360.0 8.9 8.7 -5.0