==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER RIBOSOME BINDING 16-APR-97 1AH9 . COMPND 2 MOLECULE: INITIATION FACTOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR M.SETTE,P.VAN TILBORG,R.SPURIO,R.KAPTEIN,M.PACI, . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5000.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 45 63.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 5 7.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 19 26.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 2.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 13 18.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 7.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 2 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 148 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -54.2 17.4 12.3 5.2 2 2 A K + 0 0 174 0, 0.0 2,-1.2 0, 0.0 0, 0.0 0.455 360.0 20.7-123.7 -87.0 19.2 8.8 5.3 3 3 A E S S+ 0 0 137 54,-0.0 56,-0.1 2,-0.0 2,-0.1 -0.304 86.8 158.3 -87.2 56.4 17.0 5.6 5.9 4 4 A D - 0 0 113 -2,-1.2 2,-0.3 53,-0.1 0, 0.0 -0.380 47.0-100.4 -80.3 155.3 13.6 7.2 4.8 5 5 A N - 0 0 61 52,-0.1 2,-0.3 -2,-0.1 52,-0.2 -0.588 37.3-145.7 -76.9 128.9 10.4 5.4 3.6 6 6 A I E -A 56 0A 89 50,-1.0 50,-2.3 -2,-0.3 2,-0.5 -0.730 10.6-129.7 -96.7 141.1 9.9 5.4 -0.3 7 7 A E E +A 55 0A 63 -2,-0.3 48,-0.2 48,-0.2 2,-0.2 -0.818 46.3 150.3 -92.3 126.2 6.6 5.5 -2.2 8 8 A M - 0 0 36 46,-0.9 19,-0.1 -2,-0.5 18,-0.1 -0.738 25.7-173.7-168.5 83.0 6.8 2.7 -4.5 9 9 A Q - 0 0 39 -2,-0.2 17,-1.8 16,-0.1 18,-0.3 0.320 12.1-165.8 -98.5-153.0 3.5 1.2 -5.4 10 10 A G E -BC 25 52B 2 42,-0.9 42,-0.8 15,-0.3 2,-0.5 -0.935 33.2 -68.3-167.4-174.4 1.4 -1.6 -7.2 11 11 A T E -BC 24 51B 45 13,-2.1 13,-1.9 -2,-0.3 2,-0.4 -0.930 51.3-118.0-100.5 125.0 -1.6 -3.4 -8.7 12 12 A V E +B 23 0B 0 38,-1.5 11,-0.2 -2,-0.5 3,-0.1 -0.514 39.0 170.9 -60.7 117.5 -4.2 -4.6 -6.0 13 13 A L E S+ 0 0 103 9,-1.9 2,-0.3 -2,-0.4 10,-0.2 0.714 71.3 15.7-100.9 -26.4 -4.2 -8.5 -6.4 14 14 A E E -B 22 0B 98 8,-0.9 8,-2.7 33,-0.1 2,-0.7 -0.996 63.9-142.2-136.4 145.9 -6.4 -9.1 -3.2 15 15 A T E -B 21 0B 45 -2,-0.3 6,-0.3 6,-0.2 33,-0.1 -0.928 42.8-151.1 -96.6 110.3 -8.5 -6.7 -1.1 16 16 A L - 0 0 51 -2,-0.7 -1,-0.2 4,-0.5 18,-0.0 0.733 35.9 -42.7 -79.6-124.9 -7.5 -8.3 2.3 17 17 A P S S- 0 0 103 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 0.998 127.4 -2.3 -73.4 -70.5 -9.6 -8.6 5.7 18 18 A N S S- 0 0 147 1,-0.1 2,-0.0 0, 0.0 -3,-0.0 0.958 138.4 -38.8 -78.7 -70.3 -11.3 -5.1 6.4 19 19 A T S S+ 0 0 39 16,-0.0 16,-0.7 2,-0.0 2,-0.2 -0.517 93.2 134.9-159.3 75.9 -9.9 -3.0 3.4 20 20 A M E - D 0 34B 50 14,-0.2 -4,-0.5 -2,-0.0 2,-0.4 -0.558 45.4-125.9-118.6-175.4 -6.2 -4.0 2.7 21 21 A F E -BD 15 33B 0 12,-2.8 12,-2.2 -6,-0.3 2,-1.2 -0.935 5.8-157.7-144.3 109.9 -4.3 -4.8 -0.6 22 22 A R E -BD 14 32B 131 -8,-2.7 -9,-1.9 -2,-0.4 -8,-0.9 -0.801 43.8-166.1 -85.3 93.9 -2.2 -8.0 -1.4 23 23 A V E -BD 12 31B 0 8,-2.5 8,-2.9 -2,-1.2 2,-0.7 -0.728 32.8-141.6-100.9 135.2 -0.2 -5.9 -4.0 24 24 A E E -BD 11 30B 62 -13,-1.9 -13,-2.1 -2,-0.4 6,-0.2 -0.808 39.8-139.3 -85.9 116.2 2.1 -6.9 -6.9 25 25 A L E > -B 10 0B 13 4,-2.4 3,-0.9 -2,-0.7 -15,-0.3 -0.041 21.4-107.7 -70.5 174.9 4.8 -4.0 -6.7 26 26 A E T 3 S+ 0 0 126 -17,-1.8 -16,-0.1 1,-0.2 -1,-0.1 0.753 122.9 60.1 -70.1 -24.2 6.6 -2.0 -9.4 27 27 A N T 3 S- 0 0 85 -18,-0.3 -1,-0.2 2,-0.2 -17,-0.1 0.454 121.1-109.8 -75.6 -8.2 9.7 -4.1 -8.4 28 28 A G S < S+ 0 0 43 -3,-0.9 2,-0.3 1,-0.2 -2,-0.1 0.516 79.7 115.1 86.7 9.3 7.8 -7.4 -9.3 29 29 A H - 0 0 125 -6,-0.0 -4,-2.4 0, 0.0 2,-0.4 -0.829 67.7-112.6-114.4 147.5 7.3 -8.9 -5.7 30 30 A V E -D 24 0B 79 -2,-0.3 2,-0.3 -6,-0.2 -6,-0.2 -0.631 38.5-178.5 -82.3 126.9 4.0 -9.5 -3.7 31 31 A V E -D 23 0B 3 -8,-2.9 -8,-2.5 -2,-0.4 2,-0.5 -0.925 27.5-127.1-124.3 147.7 3.5 -7.2 -0.6 32 32 A T E +De 22 63B 50 30,-1.7 32,-1.4 -2,-0.3 2,-0.3 -0.826 41.9 170.6 -89.6 123.6 0.8 -7.0 2.2 33 33 A A E -De 21 64B 0 -12,-2.2 -12,-2.8 -2,-0.5 2,-0.3 -0.963 27.1-160.3-139.3 155.2 -0.5 -3.3 2.5 34 34 A H E -De 20 65B 64 30,-1.2 32,-0.8 -2,-0.3 -14,-0.2 -0.860 34.8-106.4-113.3 159.7 -3.2 -1.1 4.2 35 35 A I E - e 0 66B 6 -16,-0.7 2,-0.2 -2,-0.3 32,-0.2 -0.262 50.0 -86.5 -73.0 176.3 -4.3 2.4 3.0 36 36 A S - 0 0 18 30,-1.7 2,-2.1 31,-0.2 -1,-0.1 0.191 47.3-123.3 -79.9 25.2 -3.1 5.5 5.2 37 37 A G S S+ 0 0 45 -2,-0.2 4,-0.3 1,-0.2 -1,-0.1 -0.216 96.6 73.6 72.8 -52.4 -6.0 5.5 7.9 38 38 A K S > S+ 0 0 169 -2,-2.1 3,-0.8 1,-0.2 4,-0.3 0.934 96.8 41.1 -59.8 -58.2 -7.1 9.1 7.3 39 39 A M G > >S+ 0 0 24 1,-0.2 3,-1.2 2,-0.2 5,-0.8 0.698 89.4 91.1 -70.3 -21.5 -8.9 8.9 3.9 40 40 A R G 3 5S+ 0 0 51 1,-0.2 3,-0.3 3,-0.2 -1,-0.2 0.746 91.7 44.6 -38.4 -39.0 -10.7 5.6 4.8 41 41 A K G < 5S+ 0 0 189 -3,-0.8 -1,-0.2 -4,-0.3 -2,-0.2 0.542 105.1 54.5 -98.0 -4.5 -13.7 7.6 6.2 42 42 A N T < 5S- 0 0 137 -3,-1.2 -1,-0.2 -4,-0.3 -2,-0.1 -0.475 115.6-136.4 -93.5 53.2 -14.0 10.2 3.3 43 43 A Y T 5 - 0 0 91 -3,-0.3 2,-1.9 1,-0.2 -3,-0.2 0.282 30.3-172.8 -45.7 98.1 -14.2 6.6 1.7 44 44 A I < - 0 0 75 -5,-0.8 -1,-0.2 1,-0.0 -4,-0.1 -0.560 30.1-144.8 -82.1 74.5 -12.0 6.8 -1.4 45 45 A R + 0 0 192 -2,-1.9 2,-0.3 1,-0.0 -1,-0.0 -0.181 27.0 173.1 -65.0 138.0 -13.1 3.3 -2.5 46 46 A I - 0 0 22 4,-0.1 2,-0.2 -2,-0.0 -1,-0.0 -0.935 8.2-165.4-141.8 155.0 -11.0 0.7 -4.3 47 47 A L > - 0 0 122 -2,-0.3 2,-1.7 -35,-0.0 3,-1.4 -0.577 49.3 -50.5-131.4-174.4 -11.4 -3.0 -5.4 48 48 A T T 3 S+ 0 0 83 1,-0.2 -35,-0.1 -2,-0.2 -33,-0.1 -0.479 128.2 22.9 -72.9 84.9 -9.3 -6.1 -6.6 49 49 A G T 3 S+ 0 0 42 -2,-1.7 -1,-0.2 1,-0.1 2,-0.2 0.529 89.3 135.5 130.3 25.2 -7.3 -4.5 -9.5 50 50 A D < - 0 0 65 -3,-1.4 2,-1.7 1,-0.1 -38,-1.5 -0.481 65.4 -92.3 -94.6 165.6 -7.2 -0.7 -8.7 51 51 A K E +C 11 0B 108 -2,-0.2 20,-0.3 -40,-0.1 -40,-0.1 -0.518 56.7 176.4 -84.7 82.7 -4.3 1.9 -8.8 52 52 A V E -C 10 0B 0 -2,-1.7 -42,-0.9 -42,-0.8 2,-0.3 -0.410 28.9-136.1 -79.0 152.8 -3.0 1.8 -5.3 53 53 A T - 0 0 0 -44,-0.2 13,-0.3 -2,-0.1 2,-0.2 -0.717 20.1-172.2 -94.8 161.1 -0.0 3.7 -3.6 54 54 A V - 0 0 0 -2,-0.3 -46,-0.9 11,-0.2 2,-0.3 -0.601 3.1-166.5-157.3 86.4 2.1 1.4 -1.3 55 55 A E E +A 7 0A 40 10,-2.9 10,-0.3 -48,-0.2 -48,-0.2 -0.665 18.4 172.8 -78.2 138.6 4.8 3.2 0.7 56 56 A L E -A 6 0A 9 -50,-2.3 -50,-1.0 -2,-0.3 5,-0.1 -0.706 26.2 -98.1-136.0-179.3 7.4 0.9 2.4 57 57 A T - 0 0 48 3,-0.7 -52,-0.1 -52,-0.2 6,-0.1 -0.692 23.9-119.0-100.4 161.1 10.7 0.9 4.3 58 58 A P S S+ 0 0 61 0, 0.0 3,-0.2 0, 0.0 -1,-0.1 0.864 114.1 34.2 -53.9 -43.5 14.5 0.4 3.4 59 59 A Y S S+ 0 0 210 1,-0.2 2,-0.9 -56,-0.1 -56,-0.0 0.878 114.5 51.9 -82.9 -49.4 14.8 -2.8 5.7 60 60 A D > + 0 0 81 1,-0.2 3,-0.9 2,-0.0 -3,-0.7 -0.688 55.4 165.1-102.7 83.3 11.3 -4.5 5.5 61 61 A L T 3 + 0 0 94 -2,-0.9 -1,-0.2 1,-0.2 -2,-0.0 0.653 62.8 76.3 -73.7 -17.1 10.5 -5.0 1.7 62 62 A S T 3 S+ 0 0 78 -31,-0.1 -30,-1.7 2,-0.0 -1,-0.2 0.522 95.1 52.3 -69.0 -8.0 7.6 -7.6 2.3 63 63 A K E < +e 32 0B 86 -3,-0.9 2,-0.3 -32,-0.2 -30,-0.2 -0.591 58.2 164.1-122.7-177.7 5.0 -4.9 3.4 64 64 A G E -e 33 0B 8 -32,-1.4 -30,-1.2 -2,-0.2 2,-0.2 -0.996 19.6-138.1-177.3 177.0 3.5 -1.5 2.3 65 65 A R E -e 34 0B 97 -10,-0.3 -10,-2.9 -2,-0.3 2,-1.0 -0.774 26.9-116.8-162.7 115.9 0.7 1.3 2.6 66 66 A I E +e 35 0B 0 -32,-0.8 -30,-1.7 -12,-0.3 -12,-0.1 -0.324 43.6 167.3 -39.0 91.0 -1.4 3.6 0.2 67 67 A V - 0 0 14 -2,-1.0 2,-0.3 1,-0.3 -31,-0.2 0.963 61.2 -12.6 -77.2 -87.3 -0.1 7.1 1.3 68 68 A F S S- 0 0 131 -16,-0.0 2,-0.6 -32,-0.0 -1,-0.3 -0.939 88.0 -89.0-117.0 145.9 -1.3 9.7 -1.3 69 69 A R + 0 0 100 -2,-0.3 -17,-0.1 1,-0.2 -16,-0.0 -0.316 65.5 144.8 -60.6 99.9 -2.8 8.8 -4.8 70 70 A S 0 0 47 -2,-0.6 -1,-0.2 -19,-0.1 -17,-0.1 0.696 360.0 360.0-110.8 -29.8 0.3 8.5 -7.2 71 71 A R 0 0 133 -20,-0.3 -20,-0.1 -61,-0.1 -18,-0.0 -0.631 360.0 360.0 -82.9 360.0 -0.4 5.6 -9.7