==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 01-AUG-05 2AJE . COMPND 2 MOLECULE: TELOMERE REPEAT-BINDING PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR H.H.HSIAO,S.C.SUE,B.C.CHUNG,Y.H.CHENG,T.H.HUANG . 97 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8347.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 60.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 12.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 42 43.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 9 A Q 0 0 203 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -33.6 -29.5 2.1 -2.1 2 10 A R + 0 0 245 1,-0.2 2,-0.4 0, 0.0 0, 0.0 0.696 360.0 163.0 58.6 18.7 -27.0 1.7 0.7 3 11 A R - 0 0 205 1,-0.0 2,-0.5 2,-0.0 -1,-0.2 -0.557 27.6-149.2 -73.5 125.3 -24.4 2.9 -1.8 4 12 A I - 0 0 126 -2,-0.4 2,-0.9 -3,-0.1 -1,-0.0 -0.831 19.8-116.1-100.2 131.0 -21.2 4.1 -0.2 5 13 A R + 0 0 231 -2,-0.5 -1,-0.0 1,-0.1 -2,-0.0 -0.500 52.7 151.5 -66.9 103.2 -19.1 6.8 -1.8 6 14 A R + 0 0 146 -2,-0.9 -1,-0.1 1,-0.1 -2,-0.1 -0.737 13.1 162.9-139.0 87.7 -15.9 5.1 -2.7 7 15 A P S S+ 0 0 84 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.812 74.2 27.1 -73.3 -31.0 -14.0 6.6 -5.8 8 16 A F + 0 0 122 3,-0.0 2,-0.3 4,-0.0 26,-0.0 -0.825 65.9 169.4-128.4 167.4 -10.8 4.8 -4.9 9 17 A S >> - 0 0 27 -2,-0.3 4,-2.1 27,-0.0 3,-0.7 -0.939 56.0 -71.2-162.1 179.7 -9.7 1.7 -3.0 10 18 A V H 3> S+ 0 0 78 -2,-0.3 4,-1.4 1,-0.3 25,-0.1 0.823 125.8 63.4 -51.8 -33.0 -6.8 -0.7 -2.2 11 19 A A H >> S+ 0 0 56 1,-0.2 4,-0.7 2,-0.2 3,-0.5 0.938 105.9 41.8 -57.7 -49.6 -7.0 -1.8 -5.9 12 20 A E H <> S+ 0 0 81 -3,-0.7 4,-1.7 1,-0.2 3,-0.4 0.852 105.6 65.5 -66.1 -35.4 -6.2 1.7 -7.1 13 21 A V H 3X S+ 0 0 5 -4,-2.1 4,-2.0 21,-0.3 -1,-0.2 0.840 89.3 69.1 -55.4 -34.5 -3.5 2.0 -4.4 14 22 A E H XX S+ 0 0 105 -4,-1.4 4,-1.6 -3,-0.5 3,-0.8 0.948 102.7 41.3 -48.7 -58.4 -1.7 -0.8 -6.2 15 23 A A H 3X S+ 0 0 59 -4,-0.7 4,-1.2 -3,-0.4 -1,-0.2 0.897 111.3 57.6 -57.2 -41.1 -0.8 1.4 -9.1 16 24 A L H 3X S+ 0 0 53 -4,-1.7 4,-2.1 1,-0.2 -1,-0.3 0.809 103.4 54.9 -59.6 -29.8 -0.1 4.2 -6.6 17 25 A V H X S+ 0 0 47 -4,-1.2 4,-0.7 -5,-0.2 3,-0.6 0.829 116.5 40.9 -87.8 -37.6 4.4 5.1 -8.7 20 28 A V H 3X S+ 0 0 5 -4,-2.1 4,-1.3 1,-0.2 -2,-0.2 0.660 90.2 87.2 -85.7 -18.0 5.6 5.9 -5.1 21 29 A E H 3< S+ 0 0 113 -4,-2.1 -1,-0.2 1,-0.2 -3,-0.1 0.625 100.2 37.8 -57.4 -10.5 8.1 3.0 -5.0 22 30 A K H <4 S+ 0 0 117 -3,-0.6 -1,-0.2 -5,-0.1 -2,-0.2 0.801 130.9 23.7-106.5 -47.8 10.5 5.5 -6.6 23 31 A L H < S+ 0 0 59 -4,-0.7 -2,-0.2 74,-0.0 -3,-0.1 -0.075 91.2 142.6-111.3 32.4 9.8 8.8 -4.9 24 32 A G < + 0 0 9 -4,-1.3 66,-0.3 1,-0.1 -3,-0.1 -0.121 26.1 175.0 -68.7 168.8 8.2 7.4 -1.8 25 33 A T S S- 0 0 55 64,-0.1 -1,-0.1 63,-0.0 61,-0.1 0.454 76.5 -35.8-143.1 -36.1 8.6 8.9 1.7 26 34 A G S S- 0 0 6 59,-0.1 56,-0.1 60,-0.0 -2,-0.0 0.274 74.7-101.9 174.0 28.5 6.4 7.0 4.1 27 35 A R S > S+ 0 0 8 1,-0.1 4,-2.8 -7,-0.1 5,-0.2 0.754 75.6 142.1 42.9 30.5 3.2 6.0 2.3 28 36 A W H > S+ 0 0 159 1,-0.2 4,-1.5 2,-0.2 -1,-0.1 0.928 72.7 41.6 -63.8 -45.5 1.6 8.9 4.2 29 37 A R H > S+ 0 0 158 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.820 114.6 53.8 -71.5 -31.2 -0.5 9.8 1.2 30 38 A D H 4 S+ 0 0 5 2,-0.2 4,-0.4 1,-0.2 -2,-0.2 0.953 109.8 44.3 -68.1 -51.5 -1.3 6.2 0.5 31 39 A V H < S+ 0 0 2 -4,-2.8 7,-0.4 1,-0.2 3,-0.3 0.826 112.6 55.1 -63.1 -32.0 -2.5 5.3 4.0 32 40 A K H < S+ 0 0 109 -4,-1.5 4,-0.3 -5,-0.2 -1,-0.2 0.922 125.5 20.4 -68.0 -45.3 -4.5 8.6 4.0 33 41 A L S < S+ 0 0 93 -4,-1.9 -1,-0.2 1,-0.1 -2,-0.2 0.034 86.6 118.9-113.2 25.1 -6.4 7.8 0.8 34 42 A C S S- 0 0 22 -4,-0.4 -21,-0.3 -3,-0.3 -22,-0.1 0.927 108.5 -50.5 -54.4 -46.2 -5.9 4.0 0.8 35 43 A A S S- 0 0 6 -4,-0.3 -1,-0.1 -3,-0.2 -2,-0.1 0.183 79.5 -83.3 177.9 27.7 -9.6 3.5 0.9 36 44 A F S S+ 0 0 111 -4,-0.3 -3,-0.1 -5,-0.1 -4,-0.1 0.642 111.2 106.7 65.9 13.0 -10.8 5.7 3.8 37 45 A E S S+ 0 0 121 1,-0.1 3,-0.2 -6,-0.1 -5,-0.1 0.924 89.1 16.5 -86.0 -54.0 -9.8 2.7 5.8 38 46 A D S > S+ 0 0 3 -7,-0.4 3,-1.8 1,-0.2 -1,-0.1 -0.005 85.5 121.9-110.1 27.2 -6.6 3.9 7.5 39 47 A A T 3 S+ 0 0 48 1,-0.3 -1,-0.2 -7,-0.1 -7,-0.1 0.560 79.5 50.1 -65.7 -6.3 -7.3 7.6 6.8 40 48 A D T 3 S- 0 0 91 -3,-0.2 -1,-0.3 -9,-0.1 -2,-0.1 0.440 113.2-121.7-108.9 -5.5 -7.1 8.0 10.6 41 49 A H < - 0 0 84 -3,-1.8 3,-0.1 -10,-0.2 -2,-0.1 0.845 29.8-171.0 63.3 111.8 -3.8 6.1 11.0 42 50 A R - 0 0 163 1,-0.3 2,-0.3 -4,-0.1 3,-0.1 0.901 57.5 -26.1 -94.5 -69.2 -3.9 3.1 13.3 43 51 A T > - 0 0 64 1,-0.1 4,-2.7 0, 0.0 -1,-0.3 -0.992 48.5-119.6-150.7 153.0 -0.3 1.9 13.8 44 52 A Y H > S+ 0 0 193 -2,-0.3 4,-1.2 1,-0.2 -1,-0.1 0.917 117.9 34.7 -59.7 -45.7 3.1 1.9 12.1 45 53 A V H > S+ 0 0 70 2,-0.2 4,-1.9 3,-0.2 -1,-0.2 0.853 114.6 58.3 -78.2 -35.7 3.3 -1.9 11.9 46 54 A D H >> S+ 0 0 84 2,-0.2 4,-1.9 1,-0.2 3,-0.5 0.962 112.1 39.9 -56.8 -53.4 -0.5 -2.3 11.4 47 55 A L H 3X S+ 0 0 26 -4,-2.7 4,-2.1 1,-0.3 -1,-0.2 0.849 112.4 58.4 -62.8 -34.2 -0.4 -0.2 8.3 48 56 A K H 3X S+ 0 0 32 -4,-1.2 4,-2.5 -5,-0.3 -1,-0.3 0.802 105.1 50.8 -64.7 -29.9 2.8 -1.9 7.4 49 57 A D H X>S+ 0 0 22 -4,-1.6 3,-0.9 2,-0.2 4,-0.7 0.846 115.4 55.2 -90.2 -41.3 2.1 -5.7 -2.6 56 64 A H H 3<5S+ 0 0 52 -4,-1.9 5,-0.4 1,-0.3 4,-0.3 0.806 108.4 51.7 -61.8 -29.3 2.8 -9.4 -1.7 57 65 A T T 3<5S+ 0 0 97 -4,-2.3 -1,-0.3 2,-0.1 -2,-0.2 0.657 98.1 73.4 -81.2 -17.2 -0.7 -10.1 -3.0 58 66 A A T <45S- 0 0 31 -3,-0.9 -2,-0.2 -5,-0.2 -3,-0.1 0.975 126.4 -54.3 -59.2 -87.4 -0.0 -8.3 -6.3 59 67 A K T <5S+ 0 0 184 -4,-0.7 -3,-0.1 2,-0.0 -2,-0.1 0.101 96.9 117.8-148.2 22.6 2.3 -10.6 -8.2 60 68 A I < - 0 0 49 -5,-0.6 -3,-0.1 -4,-0.3 -4,-0.1 0.775 62.2-150.1 -64.6 -25.3 5.2 -11.3 -5.9 61 69 A S > - 0 0 74 -5,-0.4 3,-0.9 1,-0.1 -4,-0.1 0.978 19.6-176.5 51.0 72.8 4.2 -15.0 -6.0 62 70 A P T 3 S+ 0 0 47 0, 0.0 -1,-0.1 0, 0.0 8,-0.1 0.426 74.7 71.6 -78.2 2.1 5.4 -16.0 -2.5 63 71 A Q T >> S- 0 0 118 5,-0.1 4,-2.0 3,-0.1 3,-2.0 0.733 83.0-153.7 -87.6 -25.9 4.4 -19.6 -3.3 64 72 A Q T <4 - 0 0 108 -3,-0.9 4,-0.1 1,-0.3 -3,-0.0 0.657 56.3 -86.3 59.7 15.0 7.3 -20.1 -5.8 65 73 A R T 34 S+ 0 0 236 2,-0.2 -1,-0.3 1,-0.1 3,-0.1 0.610 125.1 82.1 62.1 10.8 5.0 -22.7 -7.4 66 74 A R T <4 S- 0 0 218 -3,-2.0 2,-0.3 1,-0.3 -2,-0.2 0.797 99.3 -85.3-107.9 -53.9 6.5 -25.1 -4.8 67 75 A G < - 0 0 32 -4,-2.0 -1,-0.3 -5,-0.1 -2,-0.2 -0.868 52.4 -56.0 178.1-143.3 4.6 -24.5 -1.6 68 76 A E + 0 0 189 -2,-0.3 -5,-0.1 1,-0.1 -4,-0.1 -0.611 62.2 143.7-132.2 73.0 4.5 -22.4 1.5 69 77 A P S S- 0 0 83 0, 0.0 -1,-0.1 0, 0.0 -6,-0.1 0.963 74.1 -32.4 -72.0 -87.2 7.9 -22.5 3.3 70 78 A V - 0 0 93 -8,-0.1 2,-2.0 0, 0.0 3,-0.3 -0.812 50.3-150.7-144.9 99.6 8.7 -19.2 4.8 71 79 A P + 0 0 71 0, 0.0 4,-0.2 0, 0.0 -8,-0.0 -0.473 47.0 136.3 -72.0 81.1 7.6 -15.9 3.1 72 80 A Q >> + 0 0 123 -2,-2.0 4,-2.3 2,-0.1 3,-1.0 0.705 54.3 75.4 -96.7 -27.2 10.4 -13.7 4.3 73 81 A E H 3> S+ 0 0 136 -3,-0.3 4,-2.7 1,-0.3 5,-0.3 0.901 91.4 55.4 -51.1 -47.9 11.0 -11.9 1.0 74 82 A L H 3> S+ 0 0 14 1,-0.2 4,-1.4 2,-0.2 -1,-0.3 0.811 110.7 46.8 -57.7 -30.0 7.8 -9.8 1.4 75 83 A L H <> S+ 0 0 91 -3,-1.0 4,-2.0 2,-0.2 5,-0.2 0.869 112.2 48.2 -79.6 -39.1 9.3 -8.6 4.7 76 84 A N H X S+ 0 0 106 -4,-2.3 4,-1.3 1,-0.2 -2,-0.2 0.856 115.9 44.4 -69.4 -35.5 12.7 -7.9 3.4 77 85 A R H X S+ 0 0 118 -4,-2.7 4,-2.4 -5,-0.2 -1,-0.2 0.838 112.7 50.7 -78.7 -34.9 11.3 -6.0 0.4 78 86 A V H X S+ 0 0 2 -4,-1.4 4,-2.1 -5,-0.3 5,-0.2 0.933 115.4 41.2 -68.9 -45.9 8.7 -4.0 2.4 79 87 A L H X S+ 0 0 107 -4,-2.0 4,-2.1 2,-0.2 -1,-0.2 0.837 116.6 50.5 -70.4 -33.2 11.3 -2.8 5.0 80 88 A N H X S+ 0 0 98 -4,-1.3 4,-2.0 -5,-0.2 -2,-0.2 0.914 110.2 50.0 -69.6 -43.9 13.9 -2.2 2.3 81 89 A A H X S+ 0 0 31 -4,-2.4 4,-2.0 2,-0.2 -2,-0.2 0.965 116.9 38.6 -58.7 -57.5 11.4 -0.1 0.3 82 90 A H H X S+ 0 0 49 -4,-2.1 4,-1.9 1,-0.2 5,-0.3 0.965 116.9 50.2 -59.2 -55.1 10.3 2.1 3.1 83 91 A G H X S+ 0 0 17 -4,-2.1 4,-2.7 -5,-0.2 -1,-0.2 0.829 108.4 56.2 -52.8 -33.6 13.7 2.4 4.6 84 92 A Y H X S+ 0 0 85 -4,-2.0 4,-1.4 2,-0.2 -1,-0.2 0.938 104.0 51.5 -65.4 -48.4 15.0 3.3 1.2 85 93 A W H >X>S+ 0 0 4 -4,-2.0 4,-1.4 2,-0.2 5,-0.8 0.967 117.3 37.9 -52.0 -60.6 12.6 6.2 0.8 86 94 A T H ><5S+ 0 0 73 -4,-1.9 3,-0.6 1,-0.3 -1,-0.2 0.925 120.1 46.6 -57.8 -48.3 13.6 7.8 4.1 87 95 A Q H 3<5S+ 0 0 152 -4,-2.7 -1,-0.3 -5,-0.3 -2,-0.2 0.617 107.5 61.2 -70.6 -11.6 17.2 6.9 3.7 88 96 A Q H X<5S- 0 0 58 -4,-1.4 3,-1.8 -3,-0.7 -1,-0.2 0.808 88.8-152.4 -82.9 -32.3 17.0 8.2 0.2 89 97 A Q T