==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 20-JAN-99 2ALC . COMPND 2 MOLECULE: PROTEIN (ETHANOL REGULON TRANSCRIPTIONAL . SOURCE 2 ORGANISM_SCIENTIFIC: EMERICELLA NIDULANS; . AUTHOR R.CERDAN,B.CAHUZAC,B.FELENBOK,E.GUITTET . 65 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5073.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 29 44.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 14 21.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 4 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -1 A G 0 0 97 0, 0.0 5,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 65.6 4.6 15.5 -8.2 2 0 A S + 0 0 80 5,-0.0 5,-0.1 0, 0.0 0, 0.0 0.114 360.0 34.3-159.8 -71.2 3.2 18.9 -7.3 3 1 A M S S+ 0 0 194 1,-0.2 3,-0.1 3,-0.1 0, 0.0 0.916 129.0 38.4 -66.9 -42.9 -0.2 19.9 -8.6 4 2 A A S S- 0 0 94 1,-0.3 2,-0.3 2,-0.0 -1,-0.2 0.934 138.2 -18.5 -73.2 -47.4 -1.5 16.4 -8.3 5 3 A D + 0 0 55 1,-0.1 -1,-0.3 3,-0.0 3,-0.1 -0.981 50.8 170.8-160.3 149.0 0.3 15.6 -5.1 6 4 A T S S+ 0 0 87 1,-0.4 2,-0.2 -2,-0.3 -1,-0.1 0.620 70.2 43.4-123.8 -65.1 3.2 16.9 -3.0 7 5 A R - 0 0 142 -5,-0.1 -1,-0.4 1,-0.0 2,-0.1 -0.614 57.8-165.1 -88.4 147.9 3.4 15.3 0.4 8 6 A R + 0 0 196 -2,-0.2 2,-0.5 -3,-0.1 -1,-0.0 -0.548 17.4 169.2-132.4 68.6 2.9 11.6 0.8 9 7 A R + 0 0 93 1,-0.2 3,-0.1 -2,-0.1 -2,-0.0 -0.695 18.4 132.7 -84.9 127.6 2.3 10.9 4.5 10 8 A Q + 0 0 148 -2,-0.5 2,-0.3 1,-0.4 -1,-0.2 0.491 52.4 64.3-135.3 -63.2 1.1 7.4 5.2 11 9 A N - 0 0 26 1,-0.2 -1,-0.4 2,-0.0 12,-0.0 -0.534 52.7-172.8 -72.6 131.1 3.0 5.8 8.1 12 10 A H + 0 0 66 -2,-0.3 -1,-0.2 12,-0.1 18,-0.1 0.597 44.7 122.4 -98.1 -14.8 2.4 7.6 11.4 13 11 A S S S- 0 0 6 1,-0.1 10,-0.1 4,-0.1 8,-0.1 -0.137 71.4 -99.8 -49.8 139.7 5.0 5.5 13.2 14 12 A C >> - 0 0 0 3,-0.1 4,-2.7 4,-0.1 3,-0.8 -0.017 45.6 -83.5 -58.4 165.0 7.7 7.6 14.9 15 13 A D H 3> S+ 0 0 11 37,-2.8 4,-1.8 1,-0.2 5,-0.2 0.836 125.0 47.5 -36.4 -60.8 11.2 8.0 13.3 16 14 A P H 3> S+ 0 0 20 0, 0.0 4,-1.3 0, 0.0 -1,-0.2 0.843 118.1 40.1 -60.3 -36.4 12.8 4.7 14.6 17 15 A C H <4>S+ 0 0 0 -3,-0.8 5,-3.1 2,-0.2 4,-0.4 0.933 110.3 55.1 -80.1 -48.3 9.9 2.5 13.6 18 16 A R H ><5S+ 0 0 88 -4,-2.7 3,-0.9 3,-0.3 -3,-0.2 0.899 112.1 47.0 -51.9 -39.9 9.0 4.0 10.3 19 17 A K H 3<5S+ 0 0 133 -4,-1.8 -1,-0.2 -5,-0.3 -2,-0.2 0.918 116.4 42.7 -66.8 -44.2 12.6 3.4 9.3 20 18 A G T 3<5S- 0 0 36 -4,-1.3 -1,-0.2 -5,-0.2 -2,-0.2 0.226 120.7-108.7 -87.5 15.7 12.6 -0.2 10.6 21 19 A K T < 5S+ 0 0 194 -3,-0.9 2,-0.4 -4,-0.4 -3,-0.3 0.901 71.5 143.8 59.2 45.1 9.1 -0.7 9.1 22 20 A R < - 0 0 83 -5,-3.1 2,-0.6 -8,-0.2 -1,-0.2 -0.946 41.7-148.1-117.5 135.2 7.4 -0.7 12.5 23 21 A R - 0 0 227 -2,-0.4 2,-0.2 -10,-0.1 -12,-0.0 -0.879 25.4-179.0-102.3 124.5 3.9 0.7 13.0 24 22 A C - 0 0 23 -2,-0.6 -12,-0.1 2,-0.2 -11,-0.1 -0.583 43.6-102.0-116.8-178.6 3.4 2.2 16.5 25 23 A D S S+ 0 0 101 -2,-0.2 -1,-0.1 15,-0.0 16,-0.0 0.867 82.7 116.0 -67.5 -38.8 0.7 3.8 18.6 26 24 A A - 0 0 1 2,-0.1 -2,-0.2 1,-0.1 4,-0.1 -0.067 54.2-163.5 -37.5 104.5 2.4 7.2 17.9 27 25 A P > - 0 0 49 0, 0.0 3,-0.8 0, 0.0 4,-0.1 0.068 41.2 -84.0 -78.6-164.1 -0.4 9.0 16.0 28 26 A E T 3 S+ 0 0 94 1,-0.3 3,-0.3 2,-0.1 2,-0.2 0.744 133.2 54.3 -74.9 -21.6 0.0 12.1 13.9 29 27 A N T 3> + 0 0 90 1,-0.2 4,-1.7 2,-0.1 -1,-0.3 -0.381 63.5 142.0-106.7 50.5 -0.4 13.9 17.1 30 28 A R H <> S+ 0 0 48 -3,-0.8 4,-1.5 2,-0.2 -1,-0.2 0.847 78.9 48.7 -61.4 -30.6 2.4 12.2 19.0 31 29 A N H > S+ 0 0 111 -3,-0.3 4,-1.4 2,-0.2 3,-0.4 0.951 112.3 46.1 -72.3 -46.8 3.1 15.5 20.7 32 30 A E H > S+ 0 0 85 1,-0.2 4,-1.4 2,-0.2 -2,-0.2 0.727 108.0 60.9 -65.2 -19.6 -0.6 16.0 21.5 33 31 A A H X>S+ 0 0 10 -4,-1.7 4,-2.5 2,-0.2 5,-2.0 0.889 98.1 55.4 -74.3 -38.9 -0.4 12.4 22.7 34 32 A N H <5S+ 0 0 66 -4,-1.5 -2,-0.2 -3,-0.4 -1,-0.2 0.899 107.3 50.2 -59.2 -41.3 2.2 13.4 25.3 35 33 A E H <5S+ 0 0 134 -4,-1.4 -1,-0.2 1,-0.2 -2,-0.2 0.882 111.4 48.2 -65.2 -39.0 -0.2 15.9 26.6 36 34 A N H <5S- 0 0 123 -4,-1.4 -2,-0.2 -5,-0.1 -1,-0.2 0.841 135.8 -81.0 -71.2 -34.4 -3.0 13.4 26.8 37 35 A G T <5S+ 0 0 62 -4,-2.5 -3,-0.2 1,-0.2 -4,-0.1 0.080 97.0 109.7 156.1 -28.0 -0.8 10.8 28.6 38 36 A W < + 0 0 51 -5,-2.0 -1,-0.2 1,-0.1 3,-0.1 0.067 29.1 165.6 -60.7-179.7 1.2 9.1 25.8 39 37 A V + 0 0 71 1,-0.2 2,-0.3 -3,-0.1 -5,-0.1 0.222 62.1 0.9-166.2 -44.7 4.9 9.8 25.6 40 38 A S S S- 0 0 23 -7,-0.1 -1,-0.2 -6,-0.0 -15,-0.0 -0.978 77.0 -97.1-159.5 146.2 6.6 7.3 23.3 41 39 A C > - 0 0 0 -2,-0.3 4,-2.6 1,-0.1 5,-0.3 -0.182 42.9-103.1 -62.9 157.6 5.5 4.4 21.2 42 40 A S H > S+ 0 0 62 1,-0.2 4,-1.6 2,-0.2 5,-0.2 0.815 121.6 58.4 -52.9 -31.8 5.8 0.9 22.5 43 41 A N H >>S+ 0 0 17 2,-0.2 4,-3.3 1,-0.2 5,-0.5 0.984 108.6 41.8 -63.3 -57.6 8.9 0.5 20.3 44 42 A C H >>S+ 0 0 6 1,-0.3 4,-1.8 2,-0.2 5,-0.9 0.924 118.1 46.8 -55.6 -47.5 10.8 3.4 21.8 45 43 A K H <5S+ 0 0 132 -4,-2.6 -1,-0.3 3,-0.2 -2,-0.2 0.777 116.7 46.9 -66.6 -25.1 9.7 2.4 25.3 46 44 A R H <5S+ 0 0 180 -4,-1.6 -2,-0.2 -3,-0.4 -3,-0.2 0.937 127.9 22.2 -80.6 -52.9 10.6 -1.2 24.6 47 45 A W H <5S- 0 0 143 -4,-3.3 -2,-0.2 -5,-0.2 -3,-0.2 0.485 105.2-121.5 -92.0 -7.5 14.0 -0.8 23.0 48 46 A N T << + 0 0 136 -4,-1.8 -3,-0.2 -5,-0.5 -4,-0.2 0.999 62.0 144.6 60.8 67.7 14.6 2.6 24.6 49 47 A K < - 0 0 75 -5,-0.9 2,-0.2 -6,-0.1 -5,-0.1 0.435 55.7 -73.0-104.7-119.9 15.0 4.4 21.3 50 48 A D - 0 0 96 2,-0.1 2,-0.9 -36,-0.0 -35,-0.1 -0.683 30.5-152.9-155.1 94.7 14.0 7.9 20.4 51 49 A C + 0 0 15 -2,-0.2 2,-0.3 -36,-0.1 -37,-0.0 -0.570 42.5 139.1 -72.0 105.3 10.3 8.8 19.8 52 50 A T - 0 0 20 -2,-0.9 -37,-2.8 -12,-0.0 3,-0.3 -0.990 55.8-138.7-147.3 156.1 10.5 11.8 17.4 53 51 A F > + 0 0 11 -2,-0.3 4,-1.3 1,-0.2 11,-0.2 -0.345 57.2 131.5-109.4 49.6 8.7 13.1 14.3 54 52 A N H > + 0 0 70 2,-0.2 4,-1.5 1,-0.2 -1,-0.2 0.830 69.2 61.5 -69.3 -31.1 11.9 14.1 12.6 55 53 A W H 4 S+ 0 0 17 -3,-0.3 3,-0.5 1,-0.3 -1,-0.2 0.929 106.0 47.2 -59.6 -40.7 10.6 12.4 9.5 56 54 A L H >4 S+ 0 0 6 1,-0.2 3,-0.9 2,-0.2 7,-0.6 0.812 109.0 54.5 -66.7 -32.8 7.8 14.8 9.7 57 55 A S H 3< S+ 0 0 2 -4,-1.3 -1,-0.2 1,-0.2 -2,-0.2 0.689 105.2 53.1 -75.9 -20.1 10.3 17.6 10.2 58 56 A S T 3< S+ 0 0 84 -4,-1.5 -1,-0.2 -3,-0.5 -2,-0.2 0.316 96.7 81.9 -97.1 7.6 12.2 16.7 7.1 59 57 A Q S < S- 0 0 59 -3,-0.9 -2,-0.1 2,-0.6 -3,-0.1 0.556 113.8 -21.8 -82.2-127.0 9.1 16.8 4.9 60 58 A R S S- 0 0 183 1,-0.1 2,-0.3 -4,-0.1 -3,-0.1 0.815 132.3 -25.3 -54.7 -30.0 7.6 20.0 3.4 61 59 A S S S- 0 0 86 -5,-0.5 2,-2.6 0, 0.0 -2,-0.6 -0.974 89.4 -60.8-169.9 174.3 9.5 21.8 6.2 62 60 A K + 0 0 136 -2,-0.3 3,-0.3 1,-0.2 -5,-0.2 -0.429 51.5 177.7 -70.6 76.7 10.9 21.5 9.7 63 61 A N S S+ 0 0 92 -2,-2.6 2,-0.8 -7,-0.6 -1,-0.2 0.895 77.8 39.0 -48.0 -45.8 7.6 20.7 11.3 64 62 A S 0 0 71 -11,-0.2 -1,-0.3 -3,-0.2 -7,-0.1 -0.811 360.0 360.0-111.5 91.8 9.4 20.4 14.6 65 63 A S 0 0 156 -2,-0.8 -1,-0.1 -3,-0.3 -2,-0.1 0.599 360.0 360.0-131.7 360.0 12.0 23.1 14.8