==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEINASE INHIBITOR(TRYPSIN) 14-NOV-94 1AMC . COMPND 2 MOLECULE: AMYLOID BETA-PEPTIDE; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.TALAFOUS,K.J.MARCINOWSKI,G.KLOPMAN,M.G.ZAGORSKI . 28 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2955.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 26 92.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 22 78.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A D > 0 0 137 0, 0.0 4,-2.1 0, 0.0 5,-0.4 0.000 360.0 360.0 360.0 12.4 18.8 -4.8 -1.1 2 2 A A H > + 0 0 82 1,-0.2 4,-2.0 2,-0.2 5,-0.1 0.987 360.0 37.8 -56.7 -76.1 16.6 -6.0 1.8 3 3 A E H > S+ 0 0 157 1,-0.2 4,-2.1 2,-0.2 5,-0.5 0.809 113.3 67.0 -47.0 -26.3 15.4 -2.5 3.0 4 4 A F H > S+ 0 0 139 1,-0.2 4,-1.9 2,-0.2 -2,-0.2 0.995 111.2 26.0 -60.0 -73.6 15.4 -1.7 -0.7 5 5 A R H X S+ 0 0 194 -4,-2.1 4,-1.6 2,-0.2 -1,-0.2 0.658 120.3 67.2 -66.7 -9.3 12.5 -3.9 -1.8 6 6 A H H X S+ 0 0 121 -4,-2.0 4,-1.3 -5,-0.4 -2,-0.2 0.985 106.8 31.2 -73.8 -71.8 11.3 -3.7 1.7 7 7 A D H X S+ 0 0 82 -4,-2.1 4,-2.4 2,-0.2 5,-0.4 0.906 118.5 60.4 -54.5 -38.8 10.3 -0.0 2.0 8 8 A S H X S+ 0 0 70 -4,-1.9 4,-2.0 -5,-0.5 3,-0.3 0.986 115.2 30.7 -52.8 -65.2 9.4 -0.2 -1.7 9 9 A G H X S+ 0 0 41 -4,-1.6 4,-1.2 1,-0.2 -1,-0.3 0.599 113.4 72.9 -70.0 -5.7 6.7 -2.9 -1.3 10 10 A Y H X S+ 0 0 157 -4,-1.3 4,-1.8 2,-0.2 -2,-0.2 0.969 106.8 28.2 -73.5 -53.1 6.2 -1.3 2.2 11 11 A E H X S+ 0 0 95 -4,-2.4 4,-1.8 -3,-0.3 -2,-0.2 0.929 122.1 53.1 -75.0 -41.9 4.4 1.9 1.0 12 12 A V H X S+ 0 0 91 -4,-2.0 4,-2.1 -5,-0.4 5,-0.2 0.929 104.2 58.2 -59.4 -37.0 3.1 0.1 -2.1 13 13 A H H X S+ 0 0 107 -4,-1.2 4,-2.4 -5,-0.3 3,-0.4 0.986 103.8 50.2 -53.3 -56.4 1.7 -2.5 0.3 14 14 A H H X S+ 0 0 86 -4,-1.8 4,-1.7 1,-0.2 -1,-0.3 0.853 105.1 61.5 -50.5 -32.8 -0.2 0.3 2.0 15 15 A Q H X S+ 0 0 95 -4,-1.8 4,-2.2 2,-0.2 -1,-0.2 0.967 107.2 40.9 -61.1 -51.5 -1.4 1.2 -1.5 16 16 A K H X S+ 0 0 123 -4,-2.1 4,-2.4 -3,-0.4 5,-0.4 0.944 115.9 49.4 -63.8 -46.5 -3.1 -2.1 -2.0 17 17 A L H X S+ 0 0 69 -4,-2.4 4,-1.3 1,-0.2 -1,-0.2 0.801 111.8 51.2 -64.9 -23.8 -4.5 -2.2 1.6 18 18 A V H X S+ 0 0 68 -4,-1.7 4,-1.3 -5,-0.4 -1,-0.2 0.873 109.6 49.3 -80.5 -35.9 -5.8 1.4 1.0 19 19 A F H >X S+ 0 0 146 -4,-2.2 4,-2.4 2,-0.2 3,-0.6 0.986 115.8 40.9 -66.0 -56.5 -7.5 0.4 -2.3 20 20 A F H 3X>S+ 0 0 110 -4,-2.4 4,-1.8 1,-0.3 5,-1.3 0.912 114.3 53.8 -59.8 -39.1 -9.3 -2.6 -0.9 21 21 A A H 3<>S+ 0 0 44 -4,-1.3 5,-0.6 -5,-0.4 -1,-0.3 0.817 108.2 52.7 -66.5 -24.2 -10.0 -0.6 2.3 22 22 A E H 4