==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFREEZE PROTEIN 13-JUN-97 1AME . COMPND 2 MOLECULE: TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12; . SOURCE 2 ORGANISM_SCIENTIFIC: MACROZOARCES AMERICANUS; . AUTHOR Z.JIA,E.LEINALA,Q.YE . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3690.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 57.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 24.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 4 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A A 0 0 143 0, 0.0 2,-2.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-100.8 19.6 24.9 31.0 2 1 A N + 0 0 90 25,-0.1 2,-0.5 2,-0.0 25,-0.0 0.060 360.0 136.6 -83.3 40.9 18.3 25.6 27.4 3 2 A Q - 0 0 88 -2,-2.0 25,-0.5 25,-0.1 2,-0.3 -0.717 44.5-143.0 -92.1 127.6 20.7 23.4 25.4 4 3 A A - 0 0 20 -2,-0.5 31,-2.7 23,-0.2 32,-0.3 -0.698 13.1-160.1 -91.5 142.0 19.0 21.4 22.7 5 4 A S E -AB 26 34A 0 21,-2.8 21,-2.3 -2,-0.3 2,-0.4 -0.719 30.9 -94.3-115.6 164.1 19.9 17.9 21.7 6 5 A V E -A 25 0A 0 27,-2.5 50,-2.1 50,-0.3 2,-0.4 -0.623 45.1-169.4 -76.9 128.5 19.3 15.7 18.6 7 6 A V E -AC 24 55A 0 17,-2.8 17,-2.6 -2,-0.4 2,-0.5 -0.960 30.4-103.4-124.2 141.3 16.1 13.7 19.2 8 7 A A E -A 23 0A 0 46,-3.0 45,-2.4 -2,-0.4 15,-0.2 -0.487 27.1-168.7 -64.8 117.0 15.0 10.8 16.9 9 8 A N S S+ 0 0 75 13,-2.7 2,-0.3 -2,-0.5 14,-0.2 0.587 78.0 7.7 -84.9 -12.7 12.1 12.1 14.8 10 9 A Q S S- 0 0 75 12,-0.7 2,-0.3 41,-0.1 43,-0.2 -0.922 105.0 -71.7-152.7 166.6 11.3 8.5 13.7 11 10 A L - 0 0 100 -2,-0.3 38,-0.0 41,-0.1 41,-0.0 -0.602 49.7-147.0 -64.2 129.4 12.6 5.1 14.8 12 11 A I B -D 50 0B 0 38,-2.4 38,-3.0 -2,-0.3 3,-0.1 -0.937 13.9-138.2-102.0 114.2 16.1 4.9 13.4 13 12 A P > - 0 0 51 0, 0.0 3,-0.7 0, 0.0 33,-0.3 -0.362 28.5 -89.4 -71.1 153.9 17.0 1.3 12.4 14 13 A I T 3 S+ 0 0 86 1,-0.2 33,-0.2 33,-0.1 35,-0.1 -0.200 105.5 10.3 -58.7 147.8 20.4 -0.2 13.1 15 14 A N T 3 S+ 0 0 90 31,-1.8 2,-0.4 1,-0.2 -1,-0.2 0.870 95.0 130.2 51.5 41.4 23.2 0.1 10.5 16 15 A T < - 0 0 50 -3,-0.7 30,-0.8 30,-0.3 2,-0.2 -0.977 64.3-108.7-127.6 134.2 21.3 2.7 8.5 17 16 A A B -E 45 0C 47 -2,-0.4 28,-0.2 28,-0.2 2,-0.1 -0.477 37.9-114.5 -63.8 128.4 22.7 6.0 7.3 18 17 A L - 0 0 2 26,-2.8 25,-2.8 23,-0.4 2,-0.3 -0.403 34.0-171.5 -65.5 137.6 21.2 9.0 9.1 19 18 A T > - 0 0 60 23,-0.2 3,-1.6 -2,-0.1 4,-0.3 -0.889 36.8-105.0-125.9 163.4 19.1 11.4 7.0 20 19 A L G > S+ 0 0 112 -2,-0.3 3,-1.3 1,-0.3 -1,-0.1 0.823 115.7 61.2 -62.2 -30.2 17.7 14.8 7.9 21 20 A V G 3 S+ 0 0 96 1,-0.3 -1,-0.3 -12,-0.0 -3,-0.0 0.699 98.4 60.5 -68.8 -17.7 14.1 13.6 8.3 22 21 A M G < S+ 0 0 15 -3,-1.6 -13,-2.7 -13,-0.1 -12,-0.7 0.572 99.4 64.3 -81.7 -8.7 15.2 11.3 11.1 23 22 A M E < +A 8 0A 14 -3,-1.3 2,-0.2 -4,-0.3 -15,-0.2 -0.949 51.3 168.9-128.6 126.3 16.5 14.1 13.4 24 23 A R E -A 7 0A 85 -17,-2.6 -17,-2.8 -2,-0.5 2,-0.5 -0.760 32.5-115.7-121.7 175.4 14.8 17.0 15.2 25 24 A S E +A 6 0A 70 -2,-0.2 2,-0.3 -19,-0.2 -19,-0.2 -0.955 39.0 161.3-116.1 132.8 16.0 19.4 17.9 26 25 A E E -A 5 0A 77 -21,-2.3 -21,-2.8 -2,-0.5 2,-0.9 -0.997 43.5-117.4-150.1 143.8 14.6 19.4 21.3 27 26 A V + 0 0 91 -2,-0.3 2,-0.3 -23,-0.3 -23,-0.2 -0.767 55.4 156.5 -80.0 108.0 15.5 20.7 24.9 28 27 A V - 0 0 27 -2,-0.9 4,-0.1 -25,-0.5 -25,-0.1 -0.842 38.5 -95.8-130.9 165.3 15.6 17.4 26.8 29 28 A T S S+ 0 0 137 -2,-0.3 2,-0.2 2,-0.1 26,-0.0 -0.998 102.3 37.2-129.9 130.6 17.2 16.0 30.0 30 29 A P S S- 0 0 91 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 0.529 99.0-120.7 -64.2 163.9 19.8 14.4 30.1 31 30 A V + 0 0 84 -2,-0.2 -2,-0.1 1,-0.1 -27,-0.1 -0.585 37.3 178.3 -76.8 134.2 21.6 16.4 27.3 32 31 A G - 0 0 11 1,-0.3 25,-0.2 -2,-0.3 -1,-0.1 -0.036 50.7 -17.5-109.5-146.5 22.7 14.3 24.3 33 32 A I S S- 0 0 0 23,-3.2 -27,-2.5 -27,-0.2 -1,-0.3 -0.472 84.1-101.5 -62.1 127.2 24.5 15.2 21.0 34 33 A P B > -B 5 0A 34 0, 0.0 3,-2.4 0, 0.0 -29,-0.3 -0.261 21.5-125.9 -52.9 137.2 24.1 19.0 20.5 35 34 A A G > S+ 0 0 17 -31,-2.7 3,-1.9 1,-0.3 -30,-0.1 0.806 106.9 71.3 -56.5 -26.3 21.5 20.0 18.0 36 35 A E G 3 S+ 0 0 142 -32,-0.3 4,-0.3 1,-0.3 -1,-0.3 0.700 88.8 65.9 -61.8 -19.1 24.1 22.0 16.1 37 36 A D G <> + 0 0 20 -3,-2.4 4,-1.9 1,-0.2 -1,-0.3 0.485 66.2 104.1 -85.2 3.0 25.6 18.6 15.0 38 37 A I H <> S+ 0 0 28 -3,-1.9 4,-0.9 1,-0.2 3,-0.3 0.922 81.6 47.7 -51.2 -49.6 22.7 17.5 12.9 39 38 A P H >4 S+ 0 0 97 0, 0.0 3,-0.8 0, 0.0 -1,-0.2 0.925 110.4 52.4 -59.7 -38.2 24.5 18.3 9.5 40 39 A R H 34 S+ 0 0 101 -4,-0.3 -2,-0.2 1,-0.2 -3,-0.1 0.881 105.2 56.6 -63.0 -34.6 27.6 16.5 10.7 41 40 A L H >< S+ 0 0 0 -4,-1.9 3,-2.4 -3,-0.3 -23,-0.4 0.676 76.3 118.2 -72.1 -19.8 25.5 13.4 11.6 42 41 A V T << S+ 0 0 53 -4,-0.9 -23,-0.2 -3,-0.8 3,-0.1 -0.307 86.8 7.7 -55.8 129.1 24.0 13.0 8.1 43 42 A S T 3 S+ 0 0 90 -25,-2.8 -1,-0.3 1,-0.3 -24,-0.1 0.261 99.4 122.3 74.4 -0.5 25.1 9.6 6.6 44 43 A M < - 0 0 41 -3,-2.4 -26,-2.8 -27,-0.1 2,-0.4 -0.358 58.5-125.0 -75.8 163.1 26.6 8.4 9.9 45 44 A Q E -EF 17 62C 71 17,-0.6 17,-3.0 -28,-0.2 2,-0.3 -0.867 5.5-132.0-114.2 148.2 25.2 5.1 11.3 46 45 A V E - F 0 61C 0 -30,-0.8 -31,-1.8 -2,-0.4 -30,-0.3 -0.746 9.3-145.3 -92.2 147.0 23.8 4.2 14.6 47 46 A N S S+ 0 0 66 13,-2.5 2,-0.3 -2,-0.3 14,-0.1 0.412 84.5 29.9 -93.1 3.8 25.1 1.1 16.2 48 47 A R S S- 0 0 97 12,-0.4 2,-0.2 -35,-0.1 -33,-0.1 -0.962 97.0 -90.4-150.5 154.0 21.6 0.2 17.8 49 48 A A - 0 0 53 -2,-0.3 -2,-0.1 -35,-0.1 -38,-0.0 -0.554 40.3-147.7 -66.0 137.7 18.0 0.9 16.7 50 49 A V B -D 12 0B 1 -38,-3.0 -38,-2.4 -2,-0.2 -40,-0.1 -0.915 11.4-135.6-112.3 109.0 16.9 4.2 18.2 51 50 A P > - 0 0 72 0, 0.0 3,-1.7 0, 0.0 -43,-0.2 -0.198 38.9 -80.9 -53.5 151.9 13.1 4.4 19.1 52 51 A L T 3 S+ 0 0 113 1,-0.2 -43,-0.2 -43,-0.1 -41,-0.1 -0.299 117.9 22.8 -52.3 134.2 11.1 7.5 18.2 53 52 A G T 3 S+ 0 0 39 -45,-2.4 2,-0.3 1,-0.3 -1,-0.2 0.429 88.7 137.4 88.2 -1.3 11.6 10.3 20.7 54 53 A T < - 0 0 42 -3,-1.7 -46,-3.0 -46,-0.1 2,-0.5 -0.611 57.1-121.4 -81.2 140.6 15.0 9.0 22.0 55 54 A T B -C 7 0A 22 -2,-0.3 2,-0.5 -48,-0.2 -48,-0.2 -0.705 28.4-122.5 -76.8 125.0 17.8 11.5 22.6 56 55 A L - 0 0 0 -50,-2.1 -23,-3.2 -2,-0.5 -50,-0.3 -0.561 30.1-161.9 -71.6 122.8 20.8 10.6 20.4 57 56 A M > - 0 0 41 -2,-0.5 3,-1.9 -25,-0.2 4,-0.4 -0.733 29.9-109.9-103.1 152.6 23.8 10.1 22.6 58 57 A P G > S+ 0 0 64 0, 0.0 3,-1.2 0, 0.0 6,-0.3 0.846 115.4 57.9 -48.3 -40.5 27.5 10.2 21.5 59 58 A D G 3 S+ 0 0 97 1,-0.2 -12,-0.1 3,-0.0 -3,-0.0 0.665 96.0 63.3 -71.2 -16.7 27.9 6.4 22.1 60 59 A M G < S+ 0 0 20 -3,-1.9 -13,-2.5 -14,-0.1 2,-0.6 0.557 89.2 77.4 -82.2 -14.9 25.1 5.5 19.7 61 60 A V E X S-F 46 0C 6 -3,-1.2 3,-1.9 -4,-0.4 2,-0.3 -0.884 80.8-127.9-111.3 122.8 26.7 6.8 16.5 62 61 A K E 3 S+F 45 0C 76 -17,-3.0 -17,-0.6 -2,-0.6 -2,-0.1 -0.458 93.8 8.7 -64.1 125.3 29.4 4.9 14.9 63 62 A G T 3 S+ 0 0 75 1,-0.3 2,-0.3 -2,-0.3 -1,-0.3 0.440 91.0 147.0 86.5 -1.0 32.4 7.1 14.2 64 63 A Y < + 0 0 31 -3,-1.9 2,-0.3 -6,-0.3 -1,-0.3 -0.523 10.6 156.7 -76.5 132.9 31.1 10.0 16.3 65 64 A A 0 0 67 -2,-0.3 -6,-0.0 1,-0.1 0, 0.0 -0.948 360.0 360.0-142.4 125.7 33.6 12.1 18.2 66 65 A A 0 0 127 -2,-0.3 -1,-0.1 -33,-0.0 -33,-0.0 0.915 360.0 360.0 -75.6 360.0 32.7 15.8 19.1