==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=24-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIBIOTIC 08-DEC-87 1AMT . COMPND 2 MOLECULE: ALAMETHICIN F30; . SOURCE 2 SYNTHETIC: YES; . AUTHOR R.O.FOX,F.M.RICHARDS . 60 3 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4564.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 50 83.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 18.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 39 65.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A X >> 0 0 109 0, 0.0 4,-1.6 0, 0.0 3,-0.8 0.000 360.0 360.0 360.0 -45.9 46.9 3.3 -2.6 2 2 A P H 3> + 0 0 104 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.808 360.0 58.7 -61.0 -32.9 45.0 0.4 -4.4 3 3 A X H 3> S+ 0 0 91 2,-0.2 4,-2.4 1,-0.2 5,-0.1 0.865 107.8 47.1 -65.7 -50.1 43.8 -1.2 -1.1 4 4 A A H <> S+ 0 0 11 -3,-0.8 4,-2.1 2,-0.2 -1,-0.2 0.894 111.9 49.0 -56.6 -49.2 42.1 2.2 -0.2 5 5 A X H X S+ 0 0 76 -4,-1.6 4,-2.3 2,-0.2 -2,-0.2 0.945 114.3 45.7 -62.4 -44.2 40.4 2.6 -3.6 6 6 A A H X S+ 0 0 59 -4,-2.5 4,-2.3 1,-0.2 -1,-0.2 0.837 112.6 51.1 -71.9 -35.7 39.1 -1.1 -3.5 7 7 A Q H X S+ 0 0 135 -4,-2.4 4,-2.4 -5,-0.2 -1,-0.2 0.929 109.2 49.1 -66.8 -44.7 37.8 -0.7 0.0 8 8 A X H X S+ 0 0 12 -4,-2.1 4,-1.6 2,-0.2 -2,-0.2 0.910 114.6 45.8 -59.8 -49.3 35.9 2.6 -0.7 9 9 A V H X S+ 0 0 90 -4,-2.3 4,-2.4 1,-0.2 3,-0.3 0.915 110.8 51.0 -69.2 -41.4 34.2 1.0 -3.7 10 10 A X H < S+ 0 0 78 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.943 112.1 49.7 -62.4 -35.9 33.3 -2.3 -2.0 11 11 A G H < S+ 0 0 30 -4,-2.4 4,-0.3 1,-0.3 -1,-0.3 0.795 113.8 43.9 -79.1 -27.0 31.7 -0.3 0.9 12 12 A L H >X S+ 0 0 67 -4,-1.6 3,-1.5 -3,-0.3 4,-1.1 0.809 94.3 80.8 -84.2 -36.8 29.6 2.0 -1.5 13 13 A X H 3X S+ 0 0 56 -4,-2.4 4,-2.1 1,-0.3 3,-0.3 0.829 86.2 55.4 -53.9 -32.8 28.4 -0.8 -3.8 14 14 A P H 3> S+ 0 0 76 0, 0.0 4,-2.0 0, 0.0 -1,-0.3 0.803 103.7 55.4 -72.6 -30.4 25.5 -2.1 -1.6 15 15 A V H <4 S+ 0 0 23 -3,-1.5 -2,-0.2 -4,-0.3 4,-0.2 0.891 112.7 41.2 -64.8 -60.5 23.9 1.4 -1.4 16 16 A X H >< S+ 0 0 57 -4,-1.1 3,-2.0 -3,-0.3 4,-0.2 0.920 112.6 57.0 -47.3 -55.0 23.7 1.7 -5.2 17 17 A X H >< S+ 0 0 70 -4,-2.1 3,-2.3 1,-0.3 -2,-0.2 0.888 98.1 59.8 -49.8 -39.1 22.6 -2.0 -5.5 18 18 A E T 3< S+ 0 0 154 -4,-2.0 -1,-0.3 1,-0.3 -2,-0.1 0.478 96.4 60.6 -75.5 -4.2 19.6 -1.5 -3.3 19 19 A Q T < 0 0 79 -3,-2.0 -1,-0.3 -4,-0.2 -2,-0.2 0.471 360.0 360.0 -93.7 -7.2 18.0 1.2 -5.6 20 20 A X < 0 0 216 -3,-2.3 -3,-0.1 -4,-0.2 -2,-0.0 0.189 360.0 360.0-123.3 360.0 17.9 -1.4 -8.4 21 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 22 1 B X > 0 0 128 0, 0.0 4,-2.1 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 -48.7 35.7 8.9 16.1 23 2 B P H > + 0 0 101 0, 0.0 4,-2.5 0, 0.0 5,-0.2 0.894 360.0 54.8 -67.1 -35.8 33.8 10.9 13.3 24 3 B X H > S+ 0 0 19 1,-0.2 4,-1.8 2,-0.2 5,-0.1 0.923 110.6 46.4 -59.3 -49.7 32.7 7.7 11.5 25 4 B A H > S+ 0 0 60 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.885 110.4 52.9 -62.3 -46.4 31.1 6.5 14.7 26 5 B X H X S+ 0 0 78 -4,-2.1 4,-1.7 1,-0.2 3,-0.4 0.971 111.2 47.4 -53.8 -47.3 29.4 10.0 15.4 27 6 B A H X S+ 0 0 23 -4,-2.5 4,-2.4 1,-0.3 -1,-0.2 0.837 107.5 54.1 -66.3 -37.7 27.9 10.0 11.9 28 7 B Q H X S+ 0 0 87 -4,-1.8 4,-1.7 1,-0.3 -1,-0.3 0.875 107.0 53.3 -66.5 -48.1 26.5 6.4 12.2 29 8 B X H X S+ 0 0 68 -4,-1.9 4,-2.2 -3,-0.4 3,-0.3 0.921 109.8 47.1 -54.3 -49.1 24.7 7.3 15.4 30 9 B V H X S+ 0 0 90 -4,-1.7 4,-2.8 1,-0.3 -2,-0.2 0.897 107.4 56.9 -63.0 -49.0 23.0 10.3 13.6 31 10 B X H < S+ 0 0 13 -4,-2.4 -1,-0.3 1,-0.2 -2,-0.2 0.880 112.0 42.8 -51.0 -40.9 22.0 8.1 10.7 32 11 B G H < S+ 0 0 42 -4,-1.7 4,-0.5 -3,-0.3 -2,-0.3 0.782 115.4 48.6 -82.7 -29.7 20.2 5.8 13.1 33 12 B L H >X S+ 0 0 113 -4,-2.2 4,-1.4 1,-0.2 3,-0.9 0.854 97.8 68.3 -75.2 -46.7 18.6 8.7 15.2 34 13 B X H 3X S+ 0 0 60 -4,-2.8 4,-1.0 1,-0.3 3,-0.3 0.851 98.6 47.8 -48.9 -46.6 17.2 10.8 12.3 35 14 B P H 3> S+ 0 0 46 0, 0.0 4,-0.8 0, 0.0 -1,-0.3 0.610 105.0 61.7 -69.3 -29.0 14.5 8.3 11.1 36 15 B V H X> S+ 0 0 96 -3,-0.9 3,-1.4 -4,-0.5 4,-0.6 0.960 101.7 52.0 -63.6 -41.8 13.4 7.9 14.7 37 16 B X H >X S+ 0 0 61 -4,-1.4 3,-1.5 -3,-0.3 4,-1.3 0.872 101.3 61.0 -55.8 -51.0 12.5 11.7 14.8 38 17 B X H 3< S+ 0 0 70 -4,-1.0 -1,-0.3 1,-0.3 -2,-0.2 0.792 95.7 62.3 -57.2 -26.3 10.4 11.3 11.5 39 18 B E H << S+ 0 0 171 -3,-1.4 -1,-0.3 -4,-0.8 -2,-0.2 0.668 104.4 47.7 -76.4 -24.3 8.0 8.8 13.4 40 19 B Q H << 0 0 141 -3,-1.5 -1,-0.2 -4,-0.6 -2,-0.2 0.825 360.0 360.0 -74.7 -49.6 7.0 11.6 16.0 41 20 B X < 0 0 200 -4,-1.3 -3,-0.1 0, 0.0 -4,-0.0 0.381 360.0 360.0-123.1 360.0 6.3 14.2 13.3 42 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 43 1 C X > 0 0 131 0, 0.0 4,-1.6 0, 0.0 3,-0.4 0.000 360.0 360.0 360.0 -41.2 46.7 8.1 5.8 44 2 C P H > + 0 0 64 0, 0.0 4,-2.8 0, 0.0 5,-0.2 0.800 360.0 60.6 -74.7 -30.1 44.7 6.3 3.0 45 3 C X H > S+ 0 0 86 2,-0.2 4,-1.8 1,-0.2 5,-0.1 0.865 108.1 47.1 -55.3 -50.7 43.2 3.8 5.5 46 4 C A H > S+ 0 0 54 -3,-0.4 4,-1.9 2,-0.2 -1,-0.2 0.870 110.5 50.8 -61.0 -40.8 41.7 6.9 7.2 47 5 C X H X S+ 0 0 76 -4,-1.6 4,-1.6 1,-0.2 -2,-0.2 0.941 111.9 47.5 -72.1 -44.5 40.4 8.4 3.9 48 6 C A H X S+ 0 0 8 -4,-2.8 4,-2.5 1,-0.2 5,-0.3 0.844 108.7 54.7 -65.6 -34.9 38.7 5.1 2.9 49 7 C Q H X S+ 0 0 126 -4,-1.8 4,-2.9 1,-0.2 -1,-0.2 0.852 103.7 55.5 -68.0 -43.5 37.1 4.8 6.4 50 8 C X H X S+ 0 0 47 -4,-1.9 4,-0.7 -3,-0.2 -1,-0.2 0.925 113.1 42.5 -56.9 -42.7 35.5 8.4 6.1 51 9 C V H >< S+ 0 0 62 -4,-1.6 3,-1.5 2,-0.2 4,-0.5 0.955 118.4 42.8 -69.0 -61.5 33.8 7.2 2.8 52 10 C X H >< S+ 0 0 37 -4,-2.5 3,-1.3 1,-0.3 -1,-0.2 0.857 110.7 56.8 -42.0 -52.6 32.7 3.9 4.0 53 11 C G H 3< S+ 0 0 7 -4,-2.9 -1,-0.3 -5,-0.3 -2,-0.2 0.610 105.5 49.3 -63.3 -31.1 31.6 5.2 7.4 54 12 C L T XX S+ 0 0 82 -3,-1.5 3,-1.1 -4,-0.7 4,-1.1 0.342 83.3 94.8 -88.4 -1.7 29.1 7.7 5.8 55 13 C X H <> S+ 0 0 21 -3,-1.3 4,-2.1 -4,-0.5 3,-0.5 0.852 79.0 60.2 -58.4 -36.6 27.5 5.0 3.5 56 14 C P H 3> S+ 0 0 44 0, 0.0 4,-1.9 0, 0.0 -1,-0.3 0.773 97.3 58.5 -68.5 -25.6 24.8 4.4 6.1 57 15 C V H <> S+ 0 0 52 -3,-1.1 4,-1.1 2,-0.2 -2,-0.2 0.930 109.4 44.8 -58.3 -53.1 23.7 8.2 5.8 58 16 C X H >X S+ 0 0 32 -4,-1.1 4,-1.8 -3,-0.5 3,-0.8 0.959 112.9 50.7 -54.7 -52.6 23.0 7.5 2.0 59 17 C X H 3< S+ 0 0 49 -4,-2.1 -2,-0.2 1,-0.3 -1,-0.2 0.887 107.3 53.1 -63.0 -33.1 21.2 4.2 2.8 60 18 C E H 3< S+ 0 0 62 -4,-1.9 -1,-0.3 -5,-0.2 -2,-0.2 0.796 109.6 50.6 -78.9 -29.7 18.9 5.9 5.4 61 19 C Q H << 0 0 131 -4,-1.1 -2,-0.2 -3,-0.8 -1,-0.2 0.878 360.0 360.0 -72.5 -39.5 17.9 8.6 2.7 62 20 C X < 0 0 133 -4,-1.8 -3,-0.0 -47,-0.0 -4,-0.0 -0.090 360.0 360.0-148.1 360.0 16.9 6.1 -0.1