==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=10-MAR-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFREEZE PROTEIN 18-JAN-99 2AME . COMPND 2 MOLECULE: PROTEIN (ANTIFREEZE PROTEIN TYPE III); . SOURCE 2 ORGANISM_SCIENTIFIC: MACROZOARCES AMERICANUS; . AUTHOR S.P.GRAETHER,C.I.DELUCA,J.BAARDSNES,G.A.HILL,P.L.DAVIES, . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3693.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 57.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 22.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 19.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 5 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A A 0 0 126 0, 0.0 26,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-174.1 19.1 24.5 30.4 2 1 A N + 0 0 98 2,-0.1 2,-0.6 25,-0.0 25,-0.0 0.133 360.0 122.7-106.6 5.1 18.5 26.3 27.2 3 2 A Q - 0 0 78 24,-0.0 25,-0.4 31,-0.0 2,-0.3 -0.616 49.0-158.0 -79.2 115.3 20.8 23.7 25.6 4 3 A A - 0 0 15 -2,-0.6 31,-2.1 23,-0.2 32,-0.3 -0.621 3.8-157.0 -87.5 148.0 19.1 21.8 22.8 5 4 A S E -AB 26 34A 0 21,-3.3 21,-2.3 29,-0.3 2,-0.5 -0.767 30.4 -94.0-115.6 167.1 20.1 18.4 21.4 6 5 A V E -A 25 0A 0 27,-2.3 50,-2.9 50,-0.3 2,-0.3 -0.724 45.2-175.2 -79.0 126.9 19.5 16.5 18.2 7 6 A V E -AC 24 55A 0 17,-2.1 17,-2.9 -2,-0.5 2,-0.3 -0.953 32.4-102.9-126.5 138.7 16.4 14.3 18.6 8 7 A A E -A 23 0A 0 46,-2.6 45,-3.0 -2,-0.3 15,-0.2 -0.507 23.6-164.2 -71.3 130.1 15.2 11.8 15.8 9 8 A N S S+ 0 0 71 13,-2.7 2,-0.3 -2,-0.3 14,-0.2 0.423 77.5 9.7 -94.9 -3.8 12.3 13.2 13.9 10 9 A Q S S- 0 0 80 12,-0.6 2,-0.3 41,-0.1 43,-0.1 -0.949 103.1 -71.7-159.5 166.1 11.5 9.8 12.5 11 10 A L - 0 0 98 -2,-0.3 -2,-0.0 41,-0.1 38,-0.0 -0.562 47.3-154.2 -63.1 128.4 12.7 6.2 13.1 12 11 A I B -D 50 0B 0 38,-3.0 38,-2.6 -2,-0.3 3,-0.1 -0.944 13.9-135.4-106.6 110.9 16.2 6.1 11.7 13 12 A P > - 0 0 63 0, 0.0 3,-2.1 0, 0.0 33,-0.3 -0.328 35.0 -82.7 -60.3 149.6 17.0 2.4 10.7 14 13 A I T 3 S+ 0 0 96 1,-0.3 33,-0.2 33,-0.1 35,-0.1 -0.184 117.0 16.4 -53.9 140.6 20.5 1.0 11.7 15 14 A Q T 3 S+ 0 0 85 31,-1.8 -1,-0.3 1,-0.2 2,-0.3 0.558 89.3 143.7 63.0 14.7 23.1 1.9 9.2 16 15 A T < - 0 0 35 -3,-2.1 30,-2.0 32,-0.2 2,-0.4 -0.648 52.0-125.5 -78.6 140.4 21.1 4.8 7.6 17 16 A A B -E 45 0C 43 -2,-0.3 28,-0.3 28,-0.2 25,-0.1 -0.735 36.2-110.1 -82.0 126.9 23.0 7.9 6.6 18 17 A L - 0 0 1 26,-3.0 25,-2.9 -2,-0.4 2,-0.3 -0.353 34.9-174.6 -65.6 137.2 21.4 11.0 8.2 19 18 A T > - 0 0 57 23,-0.2 3,-1.3 24,-0.1 4,-0.3 -0.865 40.5-104.5-121.9 163.2 19.5 13.6 6.2 20 19 A L G > S+ 0 0 113 -2,-0.3 3,-1.4 1,-0.3 -2,-0.0 0.790 115.4 65.6 -63.7 -29.6 18.1 16.9 7.6 21 20 A V G 3 S+ 0 0 90 1,-0.2 -1,-0.3 3,-0.0 -3,-0.0 0.790 98.3 57.1 -61.8 -24.0 14.5 15.6 7.6 22 21 A M G < S+ 0 0 17 -3,-1.3 -13,-2.7 -14,-0.1 -12,-0.6 0.564 97.2 71.9 -83.3 -10.2 15.5 13.1 10.3 23 22 A M E < +A 8 0A 15 -3,-1.4 2,-0.2 -4,-0.3 -15,-0.2 -0.929 50.9 171.3-122.2 119.6 16.9 15.6 12.8 24 23 A R E -A 7 0A 86 -17,-2.9 -17,-2.1 -2,-0.5 2,-0.5 -0.700 29.9-121.1-113.2 171.0 15.0 18.1 15.0 25 24 A S E +A 6 0A 66 -2,-0.2 2,-0.3 -19,-0.2 -19,-0.2 -0.954 39.5 156.9-113.0 128.2 16.3 20.3 17.8 26 25 A E E -A 5 0A 71 -21,-2.3 -21,-3.3 -2,-0.5 2,-0.9 -0.996 46.3-115.3-150.7 153.4 14.8 19.9 21.3 27 26 A V + 0 0 86 -2,-0.3 2,-0.3 -23,-0.3 -23,-0.2 -0.777 54.9 157.6 -91.3 108.4 15.7 20.7 24.9 28 27 A V - 0 0 28 -2,-0.9 4,-0.1 -25,-0.4 -2,-0.0 -0.897 39.3 -99.3-133.4 160.3 15.9 17.2 26.5 29 28 A T S S+ 0 0 138 -2,-0.3 2,-0.2 2,-0.1 26,-0.1 -0.996 101.4 39.2-121.7 128.7 17.5 15.5 29.5 30 29 A P S S- 0 0 92 0, 0.0 2,-0.3 0, 0.0 -2,-0.1 0.548 99.0-120.9 -69.8 166.2 20.1 13.8 29.2 31 30 A V + 0 0 84 -2,-0.2 2,-0.1 1,-0.1 -2,-0.1 -0.590 35.7 179.5 -81.1 136.6 21.9 16.0 26.8 32 31 A G - 0 0 8 1,-0.3 25,-0.3 -2,-0.3 -1,-0.1 -0.100 51.5 -21.3-111.0-150.3 22.9 14.4 23.5 33 32 A I S S- 0 0 0 23,-3.2 -27,-2.3 -27,-0.3 -1,-0.3 -0.456 83.0-100.2 -62.0 133.4 24.7 15.9 20.4 34 33 A P B > -B 5 0A 44 0, 0.0 3,-2.5 0, 0.0 -29,-0.3 -0.383 22.2-126.3 -56.6 135.0 24.3 19.7 20.4 35 34 A A G > S+ 0 0 13 -31,-2.1 3,-1.7 1,-0.3 -30,-0.1 0.784 107.0 71.2 -52.1 -25.6 21.6 20.9 18.0 36 35 A E G 3 S+ 0 0 126 -32,-0.3 -1,-0.3 1,-0.3 4,-0.2 0.764 89.5 61.7 -66.2 -23.9 24.3 23.2 16.5 37 36 A D G X> + 0 0 29 -3,-2.5 3,-1.2 1,-0.2 4,-0.9 0.519 67.0 106.0 -84.2 -1.4 25.9 20.1 14.9 38 37 A I H X> S+ 0 0 27 -3,-1.7 3,-1.5 1,-0.3 4,-0.7 0.864 79.9 51.9 -49.2 -45.6 23.0 19.1 12.8 39 38 A P H >4 S+ 0 0 98 0, 0.0 3,-0.7 0, 0.0 -1,-0.3 0.839 108.0 53.0 -52.4 -40.5 24.8 20.3 9.5 40 39 A R H <4 S+ 0 0 126 -3,-1.2 -2,-0.2 1,-0.2 -3,-0.1 0.563 103.1 59.1 -73.1 -14.8 27.9 18.3 10.4 41 40 A L H X< S+ 0 0 0 -3,-1.5 3,-2.3 -4,-0.9 -23,-0.4 0.629 74.2 116.4 -88.4 -15.6 25.9 15.1 10.8 42 41 A V T << S+ 0 0 53 -4,-0.7 -23,-0.2 -3,-0.7 3,-0.1 -0.313 84.8 12.8 -65.8 136.3 24.4 14.9 7.3 43 42 A S T 3 S+ 0 0 94 -25,-2.9 -1,-0.3 1,-0.3 2,-0.3 0.344 97.1 122.3 78.0 0.5 25.6 11.8 5.4 44 43 A M < - 0 0 44 -3,-2.3 -26,-3.0 -26,-0.1 -1,-0.3 -0.668 59.9-125.2 -92.3 147.9 27.0 10.1 8.6 45 44 A Q B -E 17 0C 77 17,-0.4 17,-3.0 -28,-0.3 2,-0.3 -0.687 10.0-131.6 -94.7 146.6 25.6 6.7 9.4 46 45 A V B -F 61 0D 0 -30,-2.0 -31,-1.8 -33,-0.3 15,-0.3 -0.727 8.0-146.6 -91.7 147.2 24.0 5.7 12.7 47 46 A N S S+ 0 0 54 13,-2.5 2,-0.3 -2,-0.3 14,-0.1 0.252 79.5 25.1-100.1 13.4 25.3 2.4 14.2 48 47 A R S S- 0 0 104 12,-0.4 2,-0.3 -35,-0.1 -32,-0.2 -0.960 96.8 -81.9-160.5 163.9 22.0 1.3 15.7 49 48 A A - 0 0 52 -2,-0.3 -2,-0.1 -35,-0.1 -38,-0.0 -0.587 38.2-155.8 -75.4 138.6 18.3 2.0 15.1 50 49 A V B -D 12 0B 1 -38,-2.6 -38,-3.0 -2,-0.3 -40,-0.1 -0.956 12.1-141.9-118.9 105.2 17.1 5.3 16.6 51 50 A P > - 0 0 68 0, 0.0 3,-2.1 0, 0.0 -43,-0.3 -0.297 38.3 -77.8 -57.9 156.4 13.3 5.4 17.4 52 51 A L T 3 S+ 0 0 110 1,-0.3 -43,-0.2 -43,-0.1 -41,-0.1 -0.268 120.2 21.4 -55.6 132.2 11.3 8.5 16.8 53 52 A G T 3 S+ 0 0 38 -45,-3.0 -1,-0.3 1,-0.3 2,-0.2 0.396 89.5 136.2 86.8 -0.5 11.9 11.0 19.6 54 53 A T < - 0 0 52 -3,-2.1 -46,-2.6 1,-0.1 2,-0.4 -0.577 58.2-117.2 -82.5 140.3 15.3 9.5 20.8 55 54 A T B -C 7 0A 24 -48,-0.2 2,-0.4 -2,-0.2 -48,-0.3 -0.670 28.3-123.4 -75.0 128.2 18.1 11.9 21.6 56 55 A L - 0 0 1 -50,-2.9 -23,-3.2 -2,-0.4 -50,-0.3 -0.582 31.4-163.2 -73.2 121.1 21.1 11.4 19.3 57 56 A M > - 0 0 43 -2,-0.4 3,-2.0 -25,-0.3 4,-0.4 -0.800 29.8-110.3-107.1 154.4 24.1 10.6 21.4 58 57 A P G > S+ 0 0 64 0, 0.0 3,-1.1 0, 0.0 6,-0.2 0.846 115.0 55.8 -50.2 -40.4 27.8 10.8 20.3 59 58 A D G 3 S+ 0 0 98 1,-0.2 -12,-0.1 3,-0.1 -3,-0.0 0.611 97.3 64.7 -73.5 -10.6 28.3 7.0 20.4 60 59 A M G < S+ 0 0 10 -3,-2.0 -13,-2.5 -14,-0.1 2,-0.5 0.591 90.5 74.5 -88.6 -9.8 25.4 6.3 18.0 61 60 A V B X S-F 46 0D 7 -3,-1.1 3,-1.4 -4,-0.4 2,-0.4 -0.898 80.1-128.9-114.7 124.7 27.0 8.0 15.0 62 61 A K T 3 S+ 0 0 95 -17,-3.0 -17,-0.4 -2,-0.5 3,-0.1 -0.497 92.2 7.3 -70.0 121.5 29.8 6.5 13.0 63 62 A G T 3 S+ 0 0 73 -2,-0.4 2,-0.4 1,-0.3 -1,-0.3 0.389 89.6 144.5 92.6 -2.4 32.8 8.8 12.6 64 63 A Y < + 0 0 30 -3,-1.4 2,-0.4 -6,-0.2 -1,-0.3 -0.527 14.3 162.0 -78.5 125.3 31.4 11.4 14.9 65 64 A A 0 0 72 -2,-0.4 -3,-0.0 -3,-0.1 0, 0.0 -0.976 360.0 360.0-136.8 138.1 34.1 13.2 16.9 66 65 A A 0 0 126 -2,-0.4 -1,-0.0 -33,-0.0 -2,-0.0 0.106 360.0 360.0-134.6 360.0 33.3 16.5 18.6