==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 09-AUG-05 2AMN . COMPND 2 MOLECULE: CATHELICIDIN; . SOURCE 2 SYNTHETIC: YES; . AUTHOR Y.XIAO,H.DAI,Y.R.BOMMINENI,O.PRAKASH,G.ZHANG . 26 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3114.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 13 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 11.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 38.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A R 0 0 267 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 166.5 -11.8 7.8 -8.5 2 2 A V - 0 0 100 1,-0.1 3,-0.1 0, 0.0 0, 0.0 -0.298 360.0-161.9 -71.2 157.4 -12.4 5.6 -5.4 3 3 A K S S- 0 0 192 1,-0.2 2,-0.2 -2,-0.0 -1,-0.1 0.679 77.0 -1.6-110.1 -30.3 -11.9 6.9 -1.9 4 4 A R + 0 0 224 1,-0.0 -1,-0.2 0, 0.0 0, 0.0 -0.720 62.0 149.2-167.5 111.0 -11.6 3.6 0.0 5 5 A V S S+ 0 0 81 1,-0.3 4,-0.1 -2,-0.2 -1,-0.0 0.802 75.6 20.8-106.6 -68.6 -12.0 0.0 -1.3 6 6 A W > + 0 0 143 1,-0.1 4,-0.5 2,-0.1 -1,-0.3 -0.919 57.7 179.9-111.3 111.2 -9.8 -2.4 0.7 7 7 A P T 4 S+ 0 0 99 0, 0.0 4,-0.4 0, 0.0 -1,-0.1 0.883 87.2 18.4 -75.6 -41.9 -8.8 -1.1 4.2 8 8 A L T > S+ 0 0 122 2,-0.1 4,-1.0 3,-0.1 -2,-0.1 0.791 118.5 63.2 -98.9 -37.1 -6.8 -4.2 5.4 9 9 A V H >> S+ 0 0 65 1,-0.2 4,-1.5 2,-0.2 3,-1.3 0.959 109.8 38.9 -52.2 -59.5 -6.1 -5.8 2.0 10 10 A I H 3X S+ 0 0 68 -4,-0.5 4,-3.7 1,-0.3 5,-0.4 0.901 108.0 63.8 -58.9 -43.7 -4.0 -3.0 0.7 11 11 A R H 3> S+ 0 0 193 -4,-0.4 4,-1.4 -5,-0.2 -1,-0.3 0.720 104.0 50.5 -55.1 -20.6 -2.4 -2.3 4.0 12 12 A T H S+ 0 0 118 3,-0.1 4,-2.6 4,-0.0 5,-0.2 0.643 134.2 51.1-124.3 -49.9 10.5 -0.4 2.5 21 21 A R H > S+ 0 0 129 2,-0.2 4,-0.5 1,-0.2 -3,-0.2 0.903 120.1 37.9 -59.5 -43.7 10.7 -1.5 -1.2 22 22 A A H >4 S+ 0 0 26 -8,-0.2 3,-0.8 2,-0.2 -1,-0.2 0.957 117.1 48.9 -73.2 -53.7 8.5 1.5 -2.2 23 23 A I H >4 S+ 0 0 78 1,-0.3 3,-1.0 -5,-0.2 -2,-0.2 0.943 110.4 50.5 -50.7 -55.7 10.0 4.1 0.1 24 24 A K H 3< S+ 0 0 183 -4,-2.6 -1,-0.3 1,-0.3 -2,-0.2 0.756 104.1 62.8 -55.7 -25.0 13.6 3.2 -0.8 25 25 A K T << 0 0 147 -3,-0.8 -1,-0.3 -4,-0.5 -2,-0.1 -0.185 360.0 360.0 -95.1 41.1 12.5 3.6 -4.4 26 26 A K < 0 0 221 -3,-1.0 -3,-0.1 -2,-0.2 -2,-0.0 -0.486 360.0 360.0 -75.7 360.0 11.7 7.3 -4.0