==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFREEZE PROTEIN 24-JAN-99 3AME . COMPND 2 MOLECULE: PROTEIN (ANTIFREEZE PROTEIN TYPE III); . SOURCE 2 ORGANISM_SCIENTIFIC: MACROZOARCES AMERICANUS; . AUTHOR S.P.GRAETHER,C.I.DELUCA,J.BAARDSNES,G.A.HILL,P.L.DAVIES, . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3746.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 63.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 17 25.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 9.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 16.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 4 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A A 0 0 127 0, 0.0 2,-2.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-121.1 19.6 25.5 30.0 2 1 A N + 0 0 74 25,-0.1 2,-0.7 2,-0.0 25,-0.0 -0.296 360.0 156.7 -85.7 63.3 17.9 25.4 26.5 3 2 A Q - 0 0 108 -2,-2.2 25,-0.8 25,-0.1 2,-0.2 -0.780 33.9-143.1 -86.0 114.3 20.5 23.2 24.8 4 3 A A E -A 27 0A 29 -2,-0.7 31,-1.3 23,-0.2 2,-0.3 -0.555 17.2-166.1 -78.9 145.4 18.9 21.5 21.9 5 4 A S E -AB 26 34A 0 21,-2.9 21,-2.1 29,-0.3 2,-0.3 -0.866 32.4 -91.7-124.3 160.6 19.9 17.9 21.1 6 5 A V E -A 25 0A 0 27,-2.5 50,-2.1 -2,-0.3 2,-0.4 -0.563 46.0-169.9 -68.0 130.3 19.4 15.7 18.1 7 6 A V E -AC 24 55A 0 17,-2.3 17,-2.6 -2,-0.3 2,-0.5 -0.967 31.2-104.9-127.6 140.3 16.1 13.7 18.6 8 7 A A E -A 23 0A 0 46,-2.8 45,-2.4 -2,-0.4 15,-0.2 -0.506 27.8-167.4 -65.8 110.3 15.0 10.7 16.4 9 8 A N S S+ 0 0 72 13,-3.4 2,-0.3 -2,-0.5 14,-0.2 0.633 77.7 3.1 -74.9 -13.7 12.2 12.2 14.3 10 9 A T S S- 0 0 69 12,-0.7 2,-0.3 41,-0.1 43,-0.2 -0.896 107.2 -65.7-156.6 168.9 11.2 8.6 13.3 11 10 A L - 0 0 94 -2,-0.3 -2,-0.0 41,-0.1 38,-0.0 -0.590 46.7-147.5 -64.2 134.7 12.6 5.1 14.3 12 11 A I B -D 50 0B 0 38,-3.1 38,-3.2 -2,-0.3 3,-0.1 -0.932 18.5-135.8-104.1 113.0 16.1 4.9 13.0 13 12 A P > - 0 0 57 0, 0.0 3,-1.0 0, 0.0 33,-0.3 -0.347 30.9 -87.4 -68.8 155.7 16.7 1.2 12.1 14 13 A I T 3 S+ 0 0 95 1,-0.2 33,-0.2 33,-0.1 35,-0.1 -0.246 110.7 13.4 -57.8 144.9 19.9 -0.5 13.1 15 14 A N T 3 S+ 0 0 112 31,-1.3 2,-0.4 1,-0.2 -1,-0.2 0.813 96.1 137.4 58.4 32.7 22.8 -0.2 10.7 16 15 A T < - 0 0 47 -3,-1.0 30,-1.2 30,-0.2 -1,-0.2 -0.931 57.0-117.1-122.0 135.8 21.1 2.5 8.7 17 16 A A B -E 45 0C 44 -2,-0.4 28,-0.2 28,-0.2 2,-0.2 -0.437 36.6-111.5 -65.9 135.9 22.6 5.7 7.4 18 17 A L - 0 0 2 26,-2.7 25,-2.9 23,-0.4 2,-0.3 -0.550 34.1-171.5 -79.3 134.7 21.2 8.9 8.9 19 18 A T > - 0 0 56 -2,-0.2 3,-1.7 23,-0.2 4,-0.5 -0.848 36.7-105.0-119.0 165.9 19.1 11.2 6.7 20 19 A L G > S+ 0 0 114 1,-0.3 3,-1.0 -2,-0.3 -1,-0.0 0.830 118.0 55.7 -62.8 -33.7 17.7 14.8 7.3 21 20 A V G 3 S+ 0 0 111 1,-0.2 -1,-0.3 -12,-0.0 3,-0.0 0.607 99.2 62.9 -71.5 -11.7 14.1 13.6 7.8 22 21 A M G < S+ 0 0 25 -3,-1.7 -13,-3.4 -13,-0.1 -12,-0.7 0.675 100.7 61.0 -82.0 -13.8 15.3 11.2 10.6 23 22 A M E < +A 8 0A 14 -3,-1.0 2,-0.2 -4,-0.5 -15,-0.2 -0.920 51.1 165.5-127.6 131.2 16.5 14.1 12.8 24 23 A R E -A 7 0A 86 -17,-2.6 -17,-2.3 -2,-0.4 2,-0.4 -0.742 34.3-114.7-125.0 175.0 15.0 17.1 14.6 25 24 A S E +A 6 0A 67 -2,-0.2 2,-0.3 -19,-0.2 -19,-0.2 -0.938 37.4 166.5-110.0 144.7 16.3 19.4 17.4 26 25 A E E -A 5 0A 75 -21,-2.1 -21,-2.9 -2,-0.4 2,-0.8 -0.992 42.0-117.1-149.0 149.1 14.7 19.5 20.8 27 26 A V E +A 4 0A 85 -2,-0.3 2,-0.3 -23,-0.3 -23,-0.2 -0.803 57.8 153.1 -84.2 114.0 15.5 20.8 24.2 28 27 A V - 0 0 31 -2,-0.8 -25,-0.1 -25,-0.8 4,-0.1 -0.836 40.4 -95.4-136.6 169.9 15.6 17.6 26.2 29 28 A T S S+ 0 0 136 -2,-0.3 2,-0.2 2,-0.1 26,-0.0 -0.982 102.4 35.8-136.7 131.5 17.3 16.2 29.4 30 29 A P S S- 0 0 96 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.546 98.8-122.5 -68.9 163.5 19.9 14.6 29.4 31 30 A V - 0 0 80 -2,-0.2 2,-0.1 1,-0.1 -2,-0.1 -0.582 33.3-177.2 -75.7 141.0 21.5 16.4 26.6 32 31 A G - 0 0 10 1,-0.3 25,-0.2 -2,-0.3 3,-0.1 -0.131 52.4 -21.4-116.7-148.1 22.6 14.2 23.6 33 32 A I S S- 0 0 1 23,-3.0 -27,-2.5 -27,-0.2 -1,-0.3 -0.366 81.0-101.9 -65.5 139.0 24.5 15.3 20.5 34 33 A P B > -B 5 0A 51 0, 0.0 3,-2.3 0, 0.0 -29,-0.3 -0.303 22.0-124.8 -61.2 143.1 24.1 19.1 19.7 35 34 A A G > S+ 0 0 14 -31,-1.3 3,-2.4 1,-0.3 -30,-0.1 0.861 107.9 70.4 -60.2 -27.5 21.5 20.0 17.0 36 35 A E G 3 S+ 0 0 150 1,-0.3 -1,-0.3 -32,-0.2 4,-0.3 0.674 90.0 64.2 -62.6 -13.4 24.3 21.9 15.2 37 36 A D G <> + 0 0 32 -3,-2.3 4,-2.0 1,-0.2 3,-0.3 0.466 68.3 102.7 -91.7 4.2 25.8 18.5 14.4 38 37 A I H X> S+ 0 0 22 -3,-2.4 4,-1.0 1,-0.2 3,-0.6 0.935 81.9 47.1 -55.3 -51.0 22.9 17.3 12.3 39 38 A P H 34 S+ 0 0 100 0, 0.0 3,-0.4 0, 0.0 -1,-0.2 0.860 110.6 53.4 -61.2 -29.6 24.7 17.9 8.8 40 39 A R H 34 S+ 0 0 104 -3,-0.3 -2,-0.2 -4,-0.3 -3,-0.1 0.903 108.1 52.6 -66.9 -37.0 27.9 16.1 10.1 41 40 A L H X< S+ 0 0 0 -4,-2.0 3,-2.2 -3,-0.6 -23,-0.4 0.658 79.4 114.6 -74.3 -17.7 25.7 13.1 11.1 42 41 A V T 3< S+ 0 0 51 -4,-1.0 -23,-0.2 -3,-0.4 3,-0.1 -0.377 87.6 10.9 -59.5 129.8 24.1 12.7 7.6 43 42 A S T 3 S+ 0 0 92 -25,-2.9 -1,-0.3 1,-0.3 2,-0.2 0.353 97.9 121.2 76.7 -0.5 25.2 9.3 6.1 44 43 A M < - 0 0 41 -3,-2.2 -26,-2.7 -26,-0.1 -1,-0.3 -0.603 60.2-126.6 -82.3 159.5 26.7 8.1 9.4 45 44 A T E -EF 17 62C 36 17,-0.6 17,-2.7 -28,-0.2 2,-0.3 -0.777 8.3-131.6-107.8 150.4 25.2 4.9 10.7 46 45 A V E - F 0 61C 0 -30,-1.2 -31,-1.3 -33,-0.3 15,-0.2 -0.668 9.0-143.1 -91.7 159.9 23.7 4.1 14.1 47 46 A N S S+ 0 0 58 13,-2.5 2,-0.3 -2,-0.3 -33,-0.1 0.299 81.2 26.2-109.0 13.0 24.7 0.9 15.9 48 47 A R S S- 0 0 100 12,-0.3 2,-0.2 -35,-0.1 -33,-0.1 -0.956 98.8 -82.5-161.0 154.1 21.4 0.0 17.5 49 48 A A - 0 0 52 -2,-0.3 -35,-0.1 -35,-0.1 -2,-0.1 -0.513 42.1-150.3 -62.4 130.0 17.8 0.7 16.5 50 49 A V B -D 12 0B 2 -38,-3.2 -38,-3.1 -2,-0.2 3,-0.1 -0.903 14.1-140.5-109.0 108.2 16.8 4.3 17.8 51 50 A P > - 0 0 70 0, 0.0 3,-1.9 0, 0.0 -43,-0.2 -0.264 35.5 -75.2 -62.5 157.4 13.1 4.4 18.6 52 51 A L T 3 S+ 0 0 115 1,-0.3 -43,-0.2 -43,-0.1 -41,-0.1 -0.186 119.1 18.5 -55.7 130.0 11.0 7.5 17.8 53 52 A G T 3 S+ 0 0 40 -45,-2.4 2,-0.3 1,-0.3 -1,-0.3 0.544 89.4 138.3 89.1 0.7 11.6 10.4 20.2 54 53 A T < - 0 0 45 -3,-1.9 -46,-2.8 -46,-0.1 2,-0.4 -0.658 55.9-120.7 -78.8 137.6 15.1 9.1 21.5 55 54 A T B -C 7 0A 27 -2,-0.3 2,-0.4 -48,-0.2 -48,-0.2 -0.652 29.0-121.5 -70.8 126.9 17.9 11.6 22.0 56 55 A L - 0 0 0 -50,-2.1 -23,-3.0 -2,-0.4 -50,-0.3 -0.580 30.6-159.1 -73.8 123.5 20.9 10.6 19.8 57 56 A M >> - 0 0 56 -2,-0.4 3,-2.2 -25,-0.2 4,-0.6 -0.804 27.2-113.1-103.8 151.9 23.8 10.0 22.1 58 57 A P G >4 S+ 0 0 62 0, 0.0 3,-1.2 0, 0.0 6,-0.3 0.880 114.6 58.2 -50.8 -42.4 27.5 10.1 20.9 59 58 A D G 34 S+ 0 0 93 1,-0.2 -12,-0.0 3,-0.1 -3,-0.0 0.556 96.9 63.0 -68.6 -7.9 27.9 6.4 21.6 60 59 A M G <4 S+ 0 0 22 -3,-2.2 -13,-2.5 -14,-0.1 2,-0.6 0.678 87.7 77.7 -90.6 -19.9 25.1 5.4 19.2 61 60 A V E X< S-F 46 0C 7 -3,-1.2 3,-1.4 -4,-0.6 2,-0.5 -0.817 80.5-130.3-102.4 126.4 26.6 6.7 16.0 62 61 A K E 3 S+F 45 0C 87 -17,-2.7 -17,-0.6 -2,-0.6 -2,-0.1 -0.583 93.5 11.2 -71.7 116.2 29.3 4.6 14.4 63 62 A G T 3 S+ 0 0 72 -2,-0.5 2,-0.5 1,-0.3 -1,-0.3 0.541 91.1 144.3 94.5 11.3 32.3 6.9 13.6 64 63 A Y < + 0 0 31 -3,-1.4 2,-0.3 -6,-0.3 -1,-0.3 -0.689 10.4 154.0 -93.8 124.4 31.1 9.9 15.7 65 64 A A 0 0 66 -2,-0.5 0, 0.0 1,-0.1 0, 0.0 -0.963 360.0 360.0-138.4 145.2 33.6 12.0 17.5 66 65 A A 0 0 131 -2,-0.3 -1,-0.1 -33,-0.0 -2,-0.0 0.814 360.0 360.0 -93.9 360.0 32.9 15.7 18.2