==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFREEZE PROTEIN 24-JAN-99 6AME . COMPND 2 MOLECULE: PROTEIN (ANTIFREEZE PROTEIN TYPE III); . SOURCE 2 ORGANISM_SCIENTIFIC: MACROZOARCES AMERICANUS; . AUTHOR S.P.GRAETHER,C.I.DELUCA,J.BAARDSNES,G.A.HILL,P.L.DAVIES, . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3720.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 36 54.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 22.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 6.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 10 15.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 5 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A A 0 0 141 0, 0.0 2,-1.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-106.3 19.7 25.7 29.7 2 1 A N + 0 0 82 25,-0.1 2,-0.6 2,-0.0 25,-0.0 -0.073 360.0 144.9 -86.8 42.6 18.2 25.9 26.2 3 2 A Q - 0 0 79 -2,-1.2 25,-0.4 25,-0.1 2,-0.3 -0.732 38.7-152.0 -83.9 119.8 20.9 23.6 24.7 4 3 A A - 0 0 17 -2,-0.6 31,-1.9 23,-0.2 32,-0.3 -0.701 8.8-156.4 -91.4 147.7 19.0 21.7 22.2 5 4 A S E -AB 26 34A 0 21,-3.1 21,-2.0 -2,-0.3 2,-0.4 -0.718 28.7 -91.5-120.1 167.1 19.9 18.1 21.1 6 5 A V E -A 25 0A 0 27,-1.8 50,-2.2 50,-0.4 2,-0.4 -0.715 44.9-172.1 -78.7 126.5 19.3 16.0 18.0 7 6 A V E -AC 24 55A 0 17,-2.5 17,-3.0 -2,-0.4 2,-0.4 -0.969 32.0-104.3-122.3 141.6 16.1 13.9 18.4 8 7 A A E -A 23 0A 0 46,-2.7 45,-2.8 -2,-0.4 15,-0.2 -0.511 27.5-169.7 -68.4 115.3 14.9 11.1 16.1 9 8 A N S S+ 0 0 71 13,-3.0 2,-0.3 -2,-0.4 14,-0.2 0.549 78.7 7.1 -81.4 -16.8 12.0 12.6 14.0 10 9 A Q S S- 0 0 87 12,-0.8 -1,-0.1 41,-0.1 2,-0.1 -0.948 104.4 -72.6-150.8 168.1 11.3 9.1 12.8 11 10 A L - 0 0 95 -2,-0.3 -2,-0.0 41,-0.1 38,-0.0 -0.472 42.5-152.9 -62.4 133.5 12.6 5.6 13.7 12 11 A I B -D 50 0B 3 38,-2.8 38,-3.1 -2,-0.1 3,-0.1 -0.959 17.0-136.1-108.4 112.0 16.2 5.1 12.4 13 12 A P > - 0 0 59 0, 0.0 3,-0.9 0, 0.0 33,-0.3 -0.271 34.6 -80.9 -60.9 153.0 16.8 1.4 11.8 14 13 A I T 3 S+ 0 0 96 1,-0.2 33,-0.2 33,-0.1 35,-0.1 -0.146 113.5 11.0 -50.4 145.0 20.1 -0.2 12.9 15 14 A N T 3 S+ 0 0 81 31,-1.5 2,-0.4 1,-0.2 -1,-0.2 0.832 97.9 130.9 52.6 40.3 23.0 0.3 10.5 16 15 A T < - 0 0 56 -3,-0.9 30,-1.9 30,-0.3 -1,-0.2 -0.958 60.5-105.7-126.5 143.4 21.2 2.8 8.5 17 16 A A B -E 45 0C 43 -2,-0.4 28,-0.3 28,-0.2 2,-0.2 -0.399 32.7-112.6 -68.5 139.7 22.4 6.3 7.4 18 17 A L - 0 0 1 26,-3.0 25,-3.2 23,-0.4 2,-0.3 -0.522 35.8-172.1 -74.4 130.6 21.2 9.5 9.0 19 18 A T > - 0 0 63 -2,-0.2 3,-0.9 23,-0.2 4,-0.5 -0.856 36.7-111.4-116.3 162.7 19.1 11.8 6.8 20 19 A L G > S+ 0 0 120 -2,-0.3 3,-0.6 1,-0.2 -1,-0.1 0.787 116.8 58.7 -66.5 -25.6 17.7 15.4 7.3 21 20 A V G 3 S+ 0 0 95 1,-0.2 -1,-0.2 3,-0.0 -3,-0.0 0.775 104.4 54.0 -70.5 -23.6 14.1 14.1 7.5 22 21 A A G < S+ 0 0 2 -3,-0.9 -13,-3.0 -13,-0.1 -12,-0.8 0.607 98.6 67.1 -86.4 -9.6 15.1 11.9 10.4 23 22 A M E < +A 8 0A 14 -3,-0.6 2,-0.2 -4,-0.5 -15,-0.2 -0.924 51.3 168.3-126.5 120.6 16.7 14.5 12.8 24 23 A R E -A 7 0A 85 -17,-3.0 -17,-2.5 -2,-0.5 2,-0.4 -0.678 30.6-119.1-114.3 179.5 14.9 17.3 14.6 25 24 A S E +A 6 0A 68 -2,-0.2 2,-0.3 -19,-0.2 -19,-0.2 -0.946 36.4 159.2-124.0 141.9 16.1 19.5 17.4 26 25 A E E -A 5 0A 87 -21,-2.0 -21,-3.1 -2,-0.4 2,-0.9 -0.984 46.3-111.0-161.6 146.5 14.6 19.8 20.8 27 26 A V + 0 0 88 -2,-0.3 2,-0.3 -23,-0.3 -23,-0.2 -0.769 58.0 157.5 -82.0 107.0 15.6 20.9 24.3 28 27 A V - 0 0 27 -2,-0.9 4,-0.1 -25,-0.4 -25,-0.1 -0.904 37.6-100.0-129.9 162.0 15.7 17.5 26.1 29 28 A T S S+ 0 0 136 -2,-0.3 2,-0.2 2,-0.1 26,-0.0 -0.999 101.2 40.6-130.5 131.0 17.3 16.1 29.3 30 29 A P S S- 0 0 95 0, 0.0 2,-0.2 0, 0.0 -2,-0.0 0.553 99.5-122.0 -66.2 161.9 19.8 14.4 29.3 31 30 A V + 0 0 80 -2,-0.2 2,-0.1 1,-0.1 -2,-0.1 -0.584 36.2 178.7 -76.7 138.2 21.6 16.4 26.6 32 31 A G - 0 0 8 1,-0.3 25,-0.2 -2,-0.2 -1,-0.1 -0.173 51.3 -19.0-113.6-149.8 22.7 14.4 23.5 33 32 A I S S- 0 0 0 23,-3.0 -27,-1.8 -27,-0.2 -1,-0.3 -0.398 81.2-101.3 -60.5 131.8 24.4 15.5 20.4 34 33 A P B > -B 5 0A 36 0, 0.0 3,-2.5 0, 0.0 -29,-0.3 -0.328 23.0-127.8 -56.3 135.3 24.2 19.4 19.9 35 34 A A G > S+ 0 0 20 -31,-1.9 3,-2.0 1,-0.3 -30,-0.1 0.828 106.7 72.0 -53.2 -31.0 21.5 20.3 17.3 36 35 A E G 3 S+ 0 0 130 -32,-0.3 -1,-0.3 1,-0.3 4,-0.3 0.737 88.6 62.2 -57.6 -25.6 24.2 22.3 15.6 37 36 A D G <> + 0 0 26 -3,-2.5 4,-2.2 1,-0.2 3,-0.3 0.466 69.3 104.0 -83.4 2.8 25.9 19.0 14.4 38 37 A I H <> S+ 0 0 24 -3,-2.0 4,-1.1 1,-0.2 -1,-0.2 0.898 80.1 50.7 -51.3 -45.5 22.9 17.8 12.3 39 38 A P H 4 S+ 0 0 98 0, 0.0 3,-0.5 0, 0.0 -1,-0.2 0.918 111.8 49.6 -55.2 -41.3 24.7 18.8 8.9 40 39 A R H 4 S+ 0 0 117 -3,-0.3 -2,-0.2 -4,-0.3 4,-0.1 0.894 106.6 55.3 -64.5 -40.7 27.7 16.8 10.1 41 40 A L H >< S+ 0 0 0 -4,-2.2 3,-2.3 2,-0.1 -23,-0.4 0.710 77.0 115.7 -70.6 -23.7 25.6 13.8 11.0 42 41 A V T 3< S+ 0 0 50 -4,-1.1 -23,-0.2 -3,-0.5 3,-0.1 -0.303 86.3 11.3 -52.0 131.6 24.0 13.4 7.6 43 42 A S T 3 S+ 0 0 93 -25,-3.2 -1,-0.3 1,-0.3 2,-0.2 0.177 95.8 122.1 79.0 -10.0 25.1 10.0 6.0 44 43 A M < - 0 0 51 -3,-2.3 -26,-3.0 -26,-0.1 2,-0.3 -0.548 60.3-127.3 -78.7 146.9 26.7 8.6 9.3 45 44 A Q B -E 17 0C 80 17,-0.4 17,-2.7 -28,-0.3 2,-0.2 -0.741 9.3-127.2 -97.6 146.2 25.1 5.3 10.3 46 45 A V B -F 61 0D 0 -30,-1.9 -31,-1.5 -2,-0.3 -30,-0.3 -0.614 6.8-145.3 -82.9 152.8 23.7 4.4 13.6 47 46 A N S S+ 0 0 60 13,-2.6 2,-0.3 -2,-0.2 -33,-0.1 0.348 82.2 26.3 -99.7 9.7 24.9 1.3 15.4 48 47 A R S S- 0 0 97 12,-0.4 -32,-0.2 -35,-0.2 2,-0.2 -0.965 98.0 -81.2-158.9 159.3 21.5 0.5 16.9 49 48 A A - 0 0 54 -2,-0.3 -2,-0.1 -35,-0.1 -38,-0.0 -0.533 40.5-153.7 -65.3 134.9 17.8 1.1 16.2 50 49 A V B -D 12 0B 1 -38,-3.1 -38,-2.8 -2,-0.2 3,-0.1 -0.951 13.3-141.5-114.3 106.6 16.9 4.6 17.3 51 50 A P > - 0 0 67 0, 0.0 3,-2.0 0, 0.0 -43,-0.3 -0.260 36.3 -77.3 -61.8 155.6 13.1 4.8 18.2 52 51 A L T 3 S+ 0 0 114 1,-0.3 -43,-0.2 -43,-0.1 -41,-0.1 -0.218 119.6 18.0 -51.3 134.5 10.9 7.9 17.3 53 52 A G T 3 S+ 0 0 40 -45,-2.8 2,-0.3 1,-0.3 -1,-0.3 0.527 89.5 137.8 80.4 5.5 11.6 10.7 19.9 54 53 A T < - 0 0 44 -3,-2.0 -46,-2.7 -46,-0.1 2,-0.5 -0.652 57.6-119.2 -85.2 142.2 14.9 9.3 21.2 55 54 A T B -C 7 0A 21 -2,-0.3 2,-0.4 -48,-0.2 -48,-0.3 -0.710 28.4-120.5 -75.9 124.5 17.8 11.7 21.8 56 55 A L - 0 0 0 -50,-2.2 -23,-3.0 -2,-0.5 -50,-0.4 -0.513 32.7-162.5 -67.6 119.3 20.8 10.9 19.5 57 56 A M > - 0 0 41 -2,-0.4 3,-1.8 -25,-0.2 4,-0.4 -0.751 28.8-110.9-100.5 153.5 23.7 10.2 21.9 58 57 A P G > S+ 0 0 64 0, 0.0 3,-1.2 0, 0.0 6,-0.3 0.856 115.5 56.7 -53.2 -40.9 27.5 10.2 20.8 59 58 A D G 3 S+ 0 0 96 1,-0.2 -12,-0.1 3,-0.1 -3,-0.0 0.588 97.0 64.5 -70.2 -8.8 27.8 6.5 21.3 60 59 A M G < S+ 0 0 25 -3,-1.8 -13,-2.6 -14,-0.1 2,-0.6 0.623 90.1 74.5 -90.2 -14.5 24.9 5.7 18.9 61 60 A V B X S-F 46 0D 6 -3,-1.2 3,-1.4 -4,-0.4 2,-0.3 -0.855 79.9-131.7-113.3 124.4 26.6 7.1 15.8 62 61 A K T 3 S+ 0 0 91 -17,-2.7 -17,-0.4 -2,-0.6 3,-0.1 -0.541 92.5 10.5 -71.4 125.8 29.4 5.2 14.1 63 62 A G T 3 S+ 0 0 71 -2,-0.3 2,-0.4 1,-0.3 -1,-0.3 0.386 89.1 141.4 90.6 -3.2 32.3 7.5 13.4 64 63 A Y < + 0 0 30 -3,-1.4 2,-0.4 -6,-0.3 -1,-0.3 -0.583 13.3 158.7 -78.7 125.8 31.1 10.4 15.5 65 64 A A 0 0 70 -2,-0.4 -3,-0.0 -3,-0.1 0, 0.0 -0.961 360.0 360.0-137.6 138.3 33.7 12.3 17.4 66 65 A A 0 0 124 -2,-0.4 -1,-0.1 -33,-0.0 -2,-0.0 0.792 360.0 360.0-104.0 360.0 32.8 15.9 18.5