==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFREEZE PROTEIN 24-JAN-99 7AME . COMPND 2 MOLECULE: PROTEIN (ANTIFREEZE PROTEIN TYPE III); . SOURCE 2 ORGANISM_SCIENTIFIC: MACROZOARCES AMERICANUS; . AUTHOR S.P.GRAETHER,C.I.DELUCA,J.BAARDSNES,G.A.HILL,P.L.DAVIES, . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3670.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 57.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 22.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 19.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 5 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A A 0 0 131 0, 0.0 26,-0.1 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 135.8 18.1 24.4 30.6 2 1 A N + 0 0 95 2,-0.0 2,-0.5 0, 0.0 25,-0.0 0.463 360.0 106.6-123.1 -17.1 18.7 26.2 27.3 3 2 A Q - 0 0 105 24,-0.1 25,-0.4 1,-0.0 2,-0.3 -0.469 55.3-156.0 -77.0 116.3 21.0 23.7 25.5 4 3 A A - 0 0 17 -2,-0.5 31,-2.4 23,-0.2 32,-0.3 -0.653 4.6-157.3 -90.2 151.7 19.3 21.8 22.8 5 4 A S E -AB 26 34A 0 21,-3.1 21,-2.2 29,-0.3 2,-0.4 -0.754 30.8 -93.7-119.5 164.0 20.3 18.4 21.4 6 5 A V E -A 25 0A 0 27,-2.4 50,-2.8 50,-0.3 2,-0.4 -0.677 45.2-172.8 -77.6 128.4 19.7 16.6 18.1 7 6 A V E -AC 24 55A 0 17,-2.4 17,-2.9 -2,-0.4 48,-0.2 -0.967 31.3-103.1-125.0 138.1 16.6 14.3 18.5 8 7 A A E -A 23 0A 1 46,-2.7 45,-2.7 -2,-0.4 15,-0.2 -0.428 24.8-165.7 -65.8 123.1 15.4 11.8 15.8 9 8 A N S S+ 0 0 69 13,-3.2 2,-0.3 -2,-0.2 14,-0.2 0.500 77.1 8.5 -88.1 -5.8 12.4 13.1 13.9 10 9 A Q S S- 0 0 73 12,-0.6 2,-0.4 40,-0.1 43,-0.1 -0.944 104.1 -70.2-156.3 169.1 11.7 9.7 12.5 11 10 A L - 0 0 95 -2,-0.3 -2,-0.0 41,-0.1 38,-0.0 -0.582 47.4-152.6 -64.0 126.8 12.9 6.1 13.1 12 11 A I B -D 50 0B 0 38,-2.6 38,-2.8 -2,-0.4 3,-0.1 -0.944 16.8-133.6-102.3 113.8 16.5 6.2 11.7 13 12 A P > - 0 0 62 0, 0.0 3,-2.1 0, 0.0 33,-0.3 -0.309 34.5 -81.2 -66.7 154.6 17.3 2.5 10.6 14 13 A I T 3 S+ 0 0 102 1,-0.3 33,-0.2 33,-0.1 35,-0.1 -0.234 115.9 10.5 -57.9 137.2 20.6 0.9 11.5 15 14 A N T 3 S+ 0 0 86 31,-1.2 -1,-0.3 1,-0.2 32,-0.1 0.484 92.4 144.3 67.2 11.5 23.4 2.0 9.2 16 15 A A < - 0 0 22 -3,-2.1 30,-2.0 32,-0.2 2,-0.4 -0.464 53.3-119.2 -75.1 148.3 21.3 4.7 7.5 17 16 A A B -E 45 0C 48 28,-0.2 28,-0.2 -2,-0.1 2,-0.1 -0.721 36.7-110.4 -83.7 135.9 23.0 7.9 6.4 18 17 A L - 0 0 1 26,-2.9 25,-2.8 23,-0.4 2,-0.3 -0.451 35.2-173.0 -72.8 135.4 21.6 10.9 8.2 19 18 A T > - 0 0 59 23,-0.2 3,-1.4 -2,-0.1 4,-0.4 -0.875 37.6-106.6-119.4 166.7 19.5 13.4 6.3 20 19 A L G > S+ 0 0 109 -2,-0.3 3,-1.4 1,-0.3 -1,-0.0 0.835 115.8 61.7 -63.2 -32.8 18.1 16.8 7.4 21 20 A V G 3 S+ 0 0 88 1,-0.3 -1,-0.3 -12,-0.0 -3,-0.0 0.739 100.1 58.8 -64.5 -20.9 14.5 15.5 7.6 22 21 A M G < S+ 0 0 20 -3,-1.4 -13,-3.2 -13,-0.1 -12,-0.6 0.636 96.8 69.2 -82.2 -12.9 15.7 13.0 10.3 23 22 A M E < +A 8 0A 15 -3,-1.4 2,-0.2 -4,-0.4 -15,-0.2 -0.923 51.4 169.6-122.0 119.9 17.0 15.6 12.8 24 23 A R E -A 7 0A 86 -17,-2.9 -17,-2.4 -2,-0.5 2,-0.5 -0.703 31.4-119.6-113.4 174.9 15.2 18.0 15.0 25 24 A S E +A 6 0A 67 -2,-0.2 2,-0.3 -19,-0.2 -19,-0.2 -0.962 39.1 159.7-119.2 124.5 16.4 20.2 17.8 26 25 A E E -A 5 0A 68 -21,-2.2 -21,-3.1 -2,-0.5 2,-1.0 -0.994 45.7-116.2-144.5 151.2 14.9 19.8 21.3 27 26 A V + 0 0 79 -2,-0.3 2,-0.3 -23,-0.3 -23,-0.2 -0.777 57.7 151.5 -89.7 104.2 15.9 20.6 24.9 28 27 A V - 0 0 29 -2,-1.0 4,-0.1 -25,-0.4 -2,-0.0 -0.887 38.7-100.6-127.2 165.5 16.1 17.1 26.3 29 28 A T S S+ 0 0 122 -2,-0.3 2,-0.1 2,-0.1 26,-0.1 -0.997 99.9 44.4-135.8 139.2 18.0 15.4 29.2 30 29 A P S S- 0 0 98 0, 0.0 2,-0.2 0, 0.0 -2,-0.1 0.580 99.5-123.7 -64.8 157.0 20.4 13.6 29.1 31 30 A V - 0 0 81 -2,-0.1 -2,-0.1 1,-0.1 2,-0.1 -0.520 34.6-179.1 -75.9 136.3 22.0 16.0 26.6 32 31 A G - 0 0 11 1,-0.3 25,-0.2 -2,-0.2 -1,-0.1 -0.065 49.9 -19.8-109.0-146.8 23.2 14.5 23.3 33 32 A I S S- 0 0 0 23,-2.8 -27,-2.4 -27,-0.3 -1,-0.3 -0.447 84.4 -98.6 -60.7 130.7 25.0 15.9 20.3 34 33 A P B > -B 5 0A 37 0, 0.0 3,-2.3 0, 0.0 -29,-0.3 -0.317 25.9-126.1 -55.0 134.2 24.5 19.7 20.3 35 34 A A G > S+ 0 0 15 -31,-2.4 3,-1.9 1,-0.3 -30,-0.1 0.811 105.9 67.5 -57.7 -27.0 21.7 20.8 18.0 36 35 A E G 3 S+ 0 0 140 -32,-0.3 -1,-0.3 1,-0.3 4,-0.2 0.711 89.1 66.4 -70.8 -8.7 24.1 23.2 16.2 37 36 A D G X> + 0 0 12 -3,-2.3 4,-0.8 1,-0.2 3,-0.7 0.475 67.7 103.2 -85.7 -1.5 26.0 20.3 14.8 38 37 A I H X> S+ 0 0 26 -3,-1.9 3,-1.6 1,-0.2 4,-0.7 0.898 77.8 53.7 -49.6 -47.5 23.0 19.1 12.7 39 38 A P H >4 S+ 0 0 94 0, 0.0 3,-0.7 0, 0.0 -1,-0.2 0.874 109.3 49.4 -51.5 -38.9 24.6 20.5 9.4 40 39 A R H <4 S+ 0 0 136 -3,-0.7 -2,-0.2 1,-0.2 -3,-0.1 0.566 102.8 61.0 -82.3 -10.3 27.8 18.6 10.0 41 40 A L H X< S+ 0 0 1 -3,-1.6 3,-2.3 -4,-0.8 -23,-0.4 0.624 73.1 119.2 -89.0 -17.2 26.0 15.3 10.7 42 41 A V T << S+ 0 0 54 -4,-0.7 -23,-0.2 -3,-0.7 3,-0.1 -0.316 83.3 11.0 -58.4 131.5 24.4 15.0 7.2 43 42 A S T 3 S+ 0 0 93 -25,-2.8 -1,-0.3 1,-0.3 2,-0.1 0.245 96.4 122.8 78.9 -4.7 25.6 11.9 5.4 44 43 A M < - 0 0 51 -3,-2.3 -26,-2.9 -26,-0.1 -1,-0.3 -0.525 60.2-122.6 -79.5 156.5 27.2 10.3 8.4 45 44 A Q B -E 17 0C 79 17,-0.4 17,-3.0 -28,-0.2 2,-0.3 -0.779 9.5-133.6-104.8 148.0 25.9 6.9 9.4 46 45 A V B -F 61 0D 0 -30,-2.0 -31,-1.2 -2,-0.3 15,-0.2 -0.662 6.5-146.7 -93.6 153.4 24.4 5.7 12.6 47 46 A N S S+ 0 0 60 13,-2.4 2,-0.3 -2,-0.3 14,-0.1 0.344 79.5 24.6-104.3 10.2 25.6 2.4 14.0 48 47 A R S S- 0 0 97 12,-0.4 2,-0.2 -35,-0.1 -32,-0.2 -0.952 95.2 -81.6-157.7 167.5 22.2 1.4 15.5 49 48 A A - 0 0 50 -2,-0.3 -2,-0.1 -35,-0.1 -38,-0.0 -0.522 38.1-156.1 -73.5 139.7 18.5 2.0 15.0 50 49 A V B -D 12 0B 1 -38,-2.8 -38,-2.6 -2,-0.2 -40,-0.1 -0.923 12.9-141.7-121.9 101.5 17.4 5.3 16.6 51 50 A P > - 0 0 68 0, 0.0 3,-2.1 0, 0.0 -43,-0.3 -0.161 38.4 -75.4 -54.1 154.0 13.6 5.3 17.3 52 51 A L T 3 S+ 0 0 108 1,-0.3 -43,-0.2 -43,-0.1 -41,-0.1 -0.301 121.0 17.8 -49.2 131.2 11.5 8.4 16.8 53 52 A G T 3 S+ 0 0 37 -45,-2.7 -1,-0.3 1,-0.3 2,-0.2 0.401 90.1 136.2 83.4 -0.9 12.1 10.9 19.6 54 53 A T < - 0 0 47 -3,-2.1 -46,-2.7 1,-0.1 2,-0.3 -0.570 58.9-116.8 -78.6 142.3 15.5 9.4 20.8 55 54 A T B -C 7 0A 22 -2,-0.2 2,-0.5 -48,-0.2 -48,-0.3 -0.589 27.7-123.6 -77.7 134.5 18.3 11.8 21.5 56 55 A L - 0 0 2 -50,-2.8 -23,-2.8 -2,-0.3 -50,-0.3 -0.678 31.2-162.7 -85.8 124.1 21.3 11.3 19.1 57 56 A M > - 0 0 40 -2,-0.5 3,-2.2 -25,-0.2 4,-0.5 -0.791 29.7-111.3-106.3 152.9 24.4 10.6 21.1 58 57 A P G > S+ 0 0 61 0, 0.0 3,-1.2 0, 0.0 6,-0.3 0.843 116.1 55.7 -50.5 -42.0 28.1 10.8 20.0 59 58 A D G 3 S+ 0 0 96 1,-0.2 -12,-0.1 3,-0.0 -3,-0.0 0.616 98.7 62.9 -71.1 -10.3 28.6 7.0 20.2 60 59 A M G < S+ 0 0 22 -3,-2.2 -13,-2.4 -14,-0.1 2,-0.5 0.583 91.8 74.5 -89.6 -12.0 25.6 6.3 17.8 61 60 A V B X S-F 46 0D 6 -3,-1.2 3,-1.5 -4,-0.5 2,-0.3 -0.889 81.7-128.9-109.3 124.3 27.3 8.1 14.9 62 61 A K T 3 S+ 0 0 84 -17,-3.0 -17,-0.4 -2,-0.5 3,-0.1 -0.494 94.0 9.1 -67.1 126.4 30.1 6.4 12.9 63 62 A G T 3 S+ 0 0 72 1,-0.3 2,-0.3 -2,-0.3 -1,-0.3 0.431 89.1 145.5 85.4 -0.2 33.1 8.8 12.6 64 63 A Y < + 0 0 31 -3,-1.5 -1,-0.3 -6,-0.3 -3,-0.1 -0.542 4.9 148.4 -75.3 130.3 31.7 11.4 15.0 65 64 A A 0 0 94 -2,-0.3 -1,-0.1 -3,-0.1 -2,-0.0 0.420 360.0 360.0-141.8 7.9 34.4 13.1 17.0 66 65 A A 0 0 95 -8,-0.1 -2,-0.0 -29,-0.0 -33,-0.0 0.633 360.0 360.0 -93.0 360.0 33.5 16.7 17.8