==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=23-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIFREEZE PROTEIN 24-JAN-99 8AME . COMPND 2 MOLECULE: PROTEIN (ANTIFREEZE PROTEIN TYPE III); . SOURCE 2 ORGANISM_SCIENTIFIC: MACROZOARCES AMERICANUS; . AUTHOR S.P.GRAETHER,C.I.DELUCA,J.BAARDSNES,G.A.HILL,P.L.DAVIES, . 66 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3659.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 59.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 16 24.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 13 19.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 2 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 4 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A A 0 0 129 0, 0.0 26,-0.1 0, 0.0 28,-0.0 0.000 360.0 360.0 360.0 87.0 18.4 23.4 30.7 2 1 A N + 0 0 94 2,-0.0 2,-0.3 0, 0.0 25,-0.0 0.452 360.0 102.6-116.5 -17.3 18.7 25.9 27.8 3 2 A Q - 0 0 104 1,-0.1 25,-0.4 24,-0.1 2,-0.3 -0.411 61.0-150.1 -73.5 122.0 21.0 23.6 25.7 4 3 A A - 0 0 18 -2,-0.3 31,-2.3 23,-0.2 32,-0.3 -0.665 9.1-156.3 -88.9 146.8 19.2 21.8 22.9 5 4 A S E -AB 26 34A 0 21,-3.2 21,-2.0 -2,-0.3 2,-0.4 -0.731 28.7 -94.7-114.5 166.4 20.1 18.4 21.5 6 5 A V E -A 25 0A 0 27,-2.5 50,-2.7 50,-0.3 2,-0.4 -0.679 44.7-173.9 -76.3 128.8 19.6 16.6 18.2 7 6 A V E -AC 24 55A 0 17,-2.4 17,-2.9 -2,-0.4 48,-0.2 -0.990 32.2-103.4-128.3 135.9 16.5 14.3 18.5 8 7 A A E -A 23 0A 0 46,-2.8 45,-2.9 -2,-0.4 15,-0.2 -0.401 23.4-162.5 -64.0 123.4 15.4 11.8 15.8 9 8 A N S S+ 0 0 63 13,-3.2 2,-0.3 -2,-0.2 14,-0.2 0.464 77.5 6.5 -85.9 -5.2 12.4 13.2 13.9 10 9 A Q S S- 0 0 72 12,-0.6 2,-0.3 41,-0.2 43,-0.1 -0.939 103.0 -68.7-161.9 167.4 11.6 9.7 12.6 11 10 A L - 0 0 98 -2,-0.3 -2,-0.0 41,-0.1 38,-0.0 -0.564 47.2-154.0 -63.1 128.7 12.8 6.2 13.1 12 11 A I B -D 50 0B 0 38,-2.7 38,-2.9 -2,-0.3 3,-0.1 -0.969 13.9-136.5-109.4 110.3 16.3 6.1 11.7 13 12 A P > - 0 0 70 0, 0.0 3,-1.8 0, 0.0 33,-0.2 -0.306 36.6 -81.4 -61.3 150.1 17.1 2.4 10.7 14 13 A I T 3 S+ 0 0 104 1,-0.3 33,-0.2 33,-0.1 35,-0.1 -0.245 116.0 16.9 -54.7 139.8 20.5 1.0 11.5 15 14 A S T 3 S+ 0 0 55 31,-1.4 -1,-0.3 1,-0.2 2,-0.1 0.464 88.7 145.2 69.0 11.7 23.2 2.1 9.1 16 15 A T < - 0 0 33 -3,-1.8 30,-2.2 32,-0.2 2,-0.5 -0.463 50.9-126.3 -72.8 146.2 21.2 4.9 7.5 17 16 A H B -E 45 0C 100 28,-0.2 28,-0.2 -2,-0.1 27,-0.1 -0.860 36.6-114.1 -89.7 123.9 23.0 8.1 6.4 18 17 A L - 0 0 1 26,-2.5 25,-2.7 -2,-0.5 2,-0.3 -0.293 32.2-170.8 -65.7 139.3 21.4 11.0 8.1 19 18 A T > - 0 0 60 23,-0.2 3,-1.2 24,-0.1 4,-0.3 -0.856 38.2-102.5-122.3 163.5 19.6 13.6 6.2 20 19 A L G > S+ 0 0 102 -2,-0.3 3,-1.4 1,-0.2 -2,-0.0 0.816 115.6 61.3 -55.5 -34.5 18.2 16.9 7.5 21 20 A V G 3 S+ 0 0 91 1,-0.3 -1,-0.2 3,-0.0 -3,-0.0 0.777 98.3 60.2 -71.7 -16.7 14.6 15.8 7.7 22 21 A M G < S+ 0 0 21 -3,-1.2 -13,-3.2 -14,-0.1 -12,-0.6 0.605 96.9 71.5 -82.2 -11.1 15.5 13.1 10.2 23 22 A M E < +A 8 0A 15 -3,-1.4 2,-0.2 -4,-0.3 -15,-0.2 -0.925 51.3 170.3-120.8 128.3 16.9 15.6 12.8 24 23 A R E -A 7 0A 89 -17,-2.9 -17,-2.4 -2,-0.5 2,-0.4 -0.739 30.1-122.1-119.1 172.5 15.1 18.1 15.1 25 24 A S E +A 6 0A 66 -2,-0.2 2,-0.3 -19,-0.2 -19,-0.2 -0.948 38.4 158.6-118.7 135.7 16.4 20.2 17.9 26 25 A E E -A 5 0A 75 -21,-2.0 -21,-3.2 -2,-0.4 2,-0.8 -0.983 46.8-114.9-156.5 147.2 14.9 19.9 21.4 27 26 A V + 0 0 77 -2,-0.3 2,-0.3 -23,-0.3 -23,-0.2 -0.784 56.4 158.0 -88.8 110.4 15.9 20.6 25.0 28 27 A V - 0 0 30 -2,-0.8 4,-0.1 -25,-0.4 -2,-0.1 -0.916 38.3 -97.8-130.8 161.6 16.0 17.1 26.4 29 28 A T S S+ 0 0 128 -2,-0.3 2,-0.2 2,-0.1 26,-0.1 -0.999 102.3 37.9-123.0 132.5 17.7 15.4 29.4 30 29 A P S S- 0 0 87 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 0.540 98.5-123.0 -74.0 166.3 20.2 13.8 29.2 31 30 A V + 0 0 82 -2,-0.2 -2,-0.1 1,-0.1 2,-0.1 -0.570 34.3 178.2 -81.8 136.7 21.9 16.0 26.7 32 31 A G - 0 0 11 1,-0.3 25,-0.3 -2,-0.3 -1,-0.1 -0.070 51.9 -17.1-110.3-147.5 23.1 14.5 23.4 33 32 A I S S- 0 0 0 23,-2.8 -27,-2.5 -27,-0.2 -1,-0.3 -0.443 83.8-102.1 -56.4 128.9 24.8 15.8 20.3 34 33 A P B > -B 5 0A 37 0, 0.0 3,-2.2 0, 0.0 -29,-0.3 -0.338 22.5-126.0 -59.8 135.1 24.4 19.7 20.4 35 34 A A G > S+ 0 0 16 -31,-2.3 3,-2.0 1,-0.3 -30,-0.1 0.812 106.2 69.9 -56.6 -25.3 21.7 20.8 18.0 36 35 A E G 3 S+ 0 0 154 -32,-0.3 -1,-0.3 1,-0.3 4,-0.2 0.737 90.6 62.3 -63.2 -20.3 24.2 23.3 16.4 37 36 A D G X> + 0 0 15 -3,-2.2 4,-1.2 1,-0.2 3,-0.9 0.506 67.9 104.6 -84.6 -1.1 26.0 20.2 14.9 38 37 A I H X> S+ 0 0 26 -3,-2.0 3,-1.0 1,-0.2 4,-0.7 0.897 76.8 57.8 -49.8 -44.2 23.0 19.1 12.8 39 38 A P H >4 S+ 0 0 97 0, 0.0 3,-0.8 0, 0.0 -1,-0.2 0.875 107.5 45.9 -43.3 -48.3 24.9 20.5 9.7 40 39 A R H <4 S+ 0 0 113 -3,-0.9 -2,-0.2 1,-0.2 -3,-0.1 0.679 102.8 64.5 -72.7 -27.2 27.9 18.3 10.2 41 40 A L H X< S+ 0 0 0 -4,-1.2 3,-1.9 -3,-1.0 -23,-0.4 0.652 72.8 113.2 -71.5 -21.6 25.9 15.2 10.9 42 41 A V T << S+ 0 0 46 -3,-0.8 -23,-0.2 -4,-0.7 3,-0.1 -0.311 87.2 11.4 -62.9 133.1 24.4 15.1 7.4 43 42 A S T 3 S+ 0 0 82 -25,-2.7 -1,-0.3 1,-0.3 -24,-0.1 0.142 97.4 122.8 81.2 -9.8 25.6 12.0 5.5 44 43 A M < - 0 0 46 -3,-1.9 -26,-2.5 -27,-0.1 2,-0.4 -0.307 61.6-120.1 -75.5 157.5 27.2 10.4 8.6 45 44 A Q E -EF 17 62C 53 17,-0.6 17,-3.1 -28,-0.2 2,-0.3 -0.820 10.9-133.8-107.1 139.6 26.0 7.0 9.4 46 45 A V E - F 0 61C 0 -30,-2.2 -31,-1.4 -2,-0.4 15,-0.2 -0.687 6.6-151.3 -87.2 145.2 24.2 5.8 12.6 47 46 A N S S+ 0 0 55 13,-2.8 2,-0.3 -2,-0.3 14,-0.1 0.357 77.5 26.7-100.2 7.2 25.5 2.5 14.0 48 47 A R S S- 0 0 87 12,-0.4 2,-0.3 -35,-0.1 -33,-0.2 -0.942 96.7 -81.8-152.7 167.9 22.2 1.5 15.6 49 48 A A - 0 0 54 -2,-0.3 -2,-0.1 -35,-0.1 -38,-0.0 -0.579 38.5-157.6 -73.9 132.6 18.5 2.1 15.1 50 49 A V B -D 12 0B 0 -38,-2.9 -38,-2.7 -2,-0.3 -40,-0.1 -0.920 12.4-145.3-114.8 101.9 17.3 5.4 16.5 51 50 A P > - 0 0 68 0, 0.0 3,-1.9 0, 0.0 -43,-0.3 -0.197 37.5 -74.7 -57.6 159.5 13.5 5.4 17.2 52 51 A L T 3 S+ 0 0 109 1,-0.3 -43,-0.2 -43,-0.1 -41,-0.1 -0.328 121.1 18.9 -53.9 129.3 11.4 8.5 16.8 53 52 A G T 3 S+ 0 0 37 -45,-2.9 2,-0.3 1,-0.3 -1,-0.3 0.436 90.3 135.5 87.7 -0.5 12.0 11.0 19.7 54 53 A T < - 0 0 47 -3,-1.9 -46,-2.8 -46,-0.1 2,-0.3 -0.616 59.1-118.2 -79.7 136.8 15.4 9.5 20.8 55 54 A T B -C 7 0A 22 -2,-0.3 2,-0.5 -48,-0.2 -48,-0.3 -0.611 26.9-123.5 -70.1 132.0 18.2 11.9 21.6 56 55 A L - 0 0 0 -50,-2.7 -23,-2.8 -2,-0.3 -50,-0.3 -0.666 31.6-163.1 -82.1 124.3 21.1 11.3 19.2 57 56 A M > - 0 0 41 -2,-0.5 3,-2.1 -25,-0.3 4,-0.5 -0.790 30.8-109.2-106.6 152.9 24.3 10.6 21.3 58 57 A P G > S+ 0 0 62 0, 0.0 3,-1.0 0, 0.0 6,-0.3 0.831 116.2 57.1 -49.6 -38.4 28.0 10.8 20.1 59 58 A D G 3 S+ 0 0 99 1,-0.2 -12,-0.0 3,-0.1 -3,-0.0 0.504 96.9 63.0 -77.0 -6.4 28.4 7.0 20.3 60 59 A M G < S+ 0 0 24 -3,-2.1 -13,-2.8 -14,-0.1 2,-0.5 0.596 91.7 72.9 -92.1 -10.4 25.5 6.4 17.9 61 60 A V E X S-F 46 0C 6 -3,-1.0 3,-1.2 -4,-0.5 2,-0.3 -0.886 81.1-130.6-109.8 123.7 27.1 8.1 14.9 62 61 A K E 3 S+F 45 0C 96 -17,-3.1 -17,-0.6 -2,-0.5 3,-0.1 -0.535 92.4 10.4 -69.9 125.5 30.0 6.5 13.1 63 62 A G T 3 S+ 0 0 71 -2,-0.3 2,-0.4 1,-0.3 -1,-0.2 0.422 90.2 144.0 90.0 -3.8 33.0 8.9 12.6 64 63 A Y < + 0 0 27 -3,-1.2 2,-0.3 -6,-0.3 -1,-0.3 -0.585 10.3 152.0 -74.9 128.7 31.6 11.5 15.0 65 64 A A 0 0 77 -2,-0.4 -3,-0.0 -3,-0.1 0, 0.0 -0.947 360.0 360.0-152.0 129.4 34.1 13.4 17.0 66 65 A A 0 0 117 -2,-0.3 -2,-0.0 0, 0.0 0, 0.0 -0.433 360.0 360.0-172.2 360.0 33.5 16.9 18.2